Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000625A_C01 KCC000625A_c01
(541 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_173240.1| nuclear poly(A) polymerase -related [Arabidopsi... 124 8e-28
pir||B86315 F2H15.20 protein - Arabidopsis thaliana gi|9665075|g... 124 8e-28
ref|NP_849561.1| poly(A) polymerase -related [Arabidopsis thalia... 114 1e-24
pir||T10692 polynucleotide adenylyltransferase homolog T16I18.60... 114 1e-24
gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana] 114 1e-24
>ref|NP_173240.1| nuclear poly(A) polymerase -related [Arabidopsis thaliana]
Length = 714
Score = 124 bits (311), Expect = 8e-28
Identities = 61/126 (48%), Positives = 87/126 (68%), Gaps = 3/126 (2%)
Frame = +3
Query: 171 PLNNSLPSAEDKRHSAELEQFLRDAGLYEPDEDAYLRQEVLGLFYELTQTWVKGVCRKKN 350
P++ P+ D + ELE+ L+D GLYE E+A R+EVLG+ ++ +TW+K + R K
Sbjct: 16 PISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTISRAKG 75
Query: 351 LN---VEDARAHVYTFGSYRLGVHGPGADMDTLVVGPRYVLRDSDFFGSEKHCLEYMLSQ 521
LN + +A A ++TFGSYRLGVHGPGAD+DTL VGPR+ R+ DFFG L+ MLS+
Sbjct: 76 LNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGE----LQRMLSE 131
Query: 522 TPDITD 539
P++T+
Sbjct: 132 MPEVTE 137
>pir||B86315 F2H15.20 protein - Arabidopsis thaliana
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity
to nuclear poly(A) polymerase from Arabidopsis thaliana
gb|AF255297 and contains a Nucleotidyltransferase
PF|01909 domain. ESTs gb|AV536592, gb|AV553256,
gb|AV561630, gb|AV532289 come from this gene
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis
thaliana] gi|32527642|gb|AAP86214.1| poly(A) polymerase
[Arabidopsis thaliana]
Length = 713
Score = 124 bits (311), Expect = 8e-28
Identities = 61/126 (48%), Positives = 87/126 (68%), Gaps = 3/126 (2%)
Frame = +3
Query: 171 PLNNSLPSAEDKRHSAELEQFLRDAGLYEPDEDAYLRQEVLGLFYELTQTWVKGVCRKKN 350
P++ P+ D + ELE+ L+D GLYE E+A R+EVLG+ ++ +TW+K + R K
Sbjct: 16 PISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIKTISRAKG 75
Query: 351 LN---VEDARAHVYTFGSYRLGVHGPGADMDTLVVGPRYVLRDSDFFGSEKHCLEYMLSQ 521
LN + +A A ++TFGSYRLGVHGPGAD+DTL VGPR+ R+ DFFG L+ MLS+
Sbjct: 76 LNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGE----LQRMLSE 131
Query: 522 TPDITD 539
P++T+
Sbjct: 132 MPEVTE 137
>ref|NP_849561.1| poly(A) polymerase -related [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60
[Arabidopsis thaliana] gi|23308169|gb|AAN18054.1|
At4g32850/T16I18_60 [Arabidopsis thaliana]
Length = 741
Score = 114 bits (284), Expect = 1e-24
Identities = 58/125 (46%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
Frame = +3
Query: 117 LCSSFMAVADPNDVYLLRPLNNSLPSAEDKRHSAELEQFLRDAGLYEPDEDAYLRQEVLG 296
L S + P + +PL+ + PS+ D + + ELE++L D GLYE +D R+EVLG
Sbjct: 8 LGGSLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLG 67
Query: 297 LFYELTQTWVKGVCRKKNLN---VEDARAHVYTFGSYRLGVHGPGADMDTLVVGPRYVLR 467
++ + WVK + +++ VEDA A ++TFGSYRLGVHGPGAD+DTL VGP YV R
Sbjct: 68 RIDQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNR 127
Query: 468 DSDFF 482
+ DFF
Sbjct: 128 EEDFF 132
>pir||T10692 polynucleotide adenylyltransferase homolog T16I18.60 - Arabidopsis
thaliana gi|7270232|emb|CAB80002.1| putative poly(A)
polymerase [Arabidopsis thaliana]
Length = 729
Score = 114 bits (284), Expect = 1e-24
Identities = 58/125 (46%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
Frame = +3
Query: 117 LCSSFMAVADPNDVYLLRPLNNSLPSAEDKRHSAELEQFLRDAGLYEPDEDAYLRQEVLG 296
L S + P + +PL+ + PS+ D + + ELE++L D GLYE +D R+EVLG
Sbjct: 7 LGGSLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLG 66
Query: 297 LFYELTQTWVKGVCRKKNLN---VEDARAHVYTFGSYRLGVHGPGADMDTLVVGPRYVLR 467
++ + WVK + +++ VEDA A ++TFGSYRLGVHGPGAD+DTL VGP YV R
Sbjct: 67 RIDQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNR 126
Query: 468 DSDFF 482
+ DFF
Sbjct: 127 EEDFF 131
>gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 114 bits (284), Expect = 1e-24
Identities = 58/125 (46%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
Frame = +3
Query: 117 LCSSFMAVADPNDVYLLRPLNNSLPSAEDKRHSAELEQFLRDAGLYEPDEDAYLRQEVLG 296
L S + P + +PL+ + PS+ D + + ELE++L D GLYE +D R+EVLG
Sbjct: 7 LGGSLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLG 66
Query: 297 LFYELTQTWVKGVCRKKNLN---VEDARAHVYTFGSYRLGVHGPGADMDTLVVGPRYVLR 467
++ + WVK + +++ VEDA A ++TFGSYRLGVHGPGAD+DTL VGP YV R
Sbjct: 67 RIDQIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNR 126
Query: 468 DSDFF 482
+ DFF
Sbjct: 127 EEDFF 131
