Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000618A_C01 KCC000618A_c01
(1007 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00005730.1| COG0784: FOG: CheY-like receiver [Rhodobacter... 65 2e-09
ref|NP_231088.1| sensor histidine kinase/response regulator [Vib... 63 9e-09
ref|NP_252663.1| probable two-component sensor [Pseudomonas aeru... 62 2e-08
ref|ZP_00043453.1| COG0642: Signal transduction histidine kinase... 62 2e-08
ref|NP_863746.1| sensory transduction histidine kinase [Pirellul... 62 2e-08
>ref|ZP_00005730.1| COG0784: FOG: CheY-like receiver [Rhodobacter sphaeroides]
Length = 849
Score = 64.7 bits (156), Expect = 2e-09
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Frame = +1
Query: 223 PAPPACAAMLQGPVMLSPLHCPRPAHLASARAVQRP---------RKSALVVDDLAVNRL 375
PA A +LQ P++ S L+ + A A RP R L +D N+L
Sbjct: 669 PAEALLAGVLQKPLLRSDLYRRLQSLTAPPAAPDRPPPVPVPALRRMRVLAAEDNRTNQL 728
Query: 376 ILGTILHKLGFEVLEAENGNQCVDVYSKAHRDIVCVFLDLQMPVADGWAATKGMRELDAA 555
+ G ++ L ++ A+NG + V++Y + D+ VF+D+ MP DG AA + +R A
Sbjct: 729 VFGKMVRDLDIDLTFADNGREAVELYDRIRPDL--VFMDISMPEMDGRAAARAIR----A 782
Query: 556 RARSGSEQQLQVPVVVCTASCLD 624
R R G+ VP+V TA L+
Sbjct: 783 RERGGT----HVPIVALTAHALE 801
>ref|NP_231088.1| sensor histidine kinase/response regulator [Vibrio cholerae O1
biovar eltor str. N16961] gi|11356143|pir||E82198 sensor
histidine kinase/response regulator VC1445 [imported] -
Vibrio cholerae (strain N16961 serogroup O1)
gi|9655945|gb|AAF94602.1| sensor histidine
kinase/response regulator [Vibrio cholerae O1 biovar
eltor str. N16961]
Length = 572
Score = 62.8 bits (151), Expect = 9e-09
Identities = 35/108 (32%), Positives = 61/108 (56%)
Frame = +1
Query: 289 RPAHLASARAVQRPRKSALVVDDLAVNRLILGTILHKLGFEVLEAENGNQCVDVYSKAHR 468
+P+ +S + V LVV+D N++++ +L+KLG++V AENG Q V++ K H
Sbjct: 439 KPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNH- 497
Query: 469 DIVCVFLDLQMPVADGWAATKGMRELDAARARSGSEQQLQVPVVVCTA 612
V +D+ MP+ DG AATK +R ++ +++P++ TA
Sbjct: 498 VFDLVLMDISMPIMDGIAATKILR-----------DKHIEIPIIALTA 534
>ref|NP_252663.1| probable two-component sensor [Pseudomonas aeruginosa PA01]
gi|11352379|pir||D83149 probable two-component sensor
PA3974 [imported] - Pseudomonas aeruginosa (strain PAO1)
gi|9950164|gb|AAG07361.1|AE004815_5 probable
two-component sensor [Pseudomonas aeruginosa PAO1]
Length = 795
Score = 62.0 bits (149), Expect = 2e-08
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = +1
Query: 292 PAHLASARAVQRPRK-SALVVDDLAVNRLILGTILHKLGFEVLEAENGNQCVDVYSKAHR 468
P A +AV+RP + + LVV+D A+N+L+ +L KLG+ V A+NG++ +++ ++
Sbjct: 653 PPRRAGGQAVRRPEECTVLVVEDNAINQLVTRGMLLKLGYRVRTADNGSEALELLARERP 712
Query: 469 DIVCVFLDLQMPVADGWAATKGMRELDAARARSGSEQQLQVPVVVCTA 612
D V LD QMPV DG+A + +R L ++PV+ TA
Sbjct: 713 D--GVLLDCQMPVMDGFATCRAIRALPGC---------AELPVLALTA 749
>ref|ZP_00043453.1| COG0642: Signal transduction histidine kinase [Magnetococcus sp.
MC-1]
Length = 1261
Score = 62.0 bits (149), Expect = 2e-08
Identities = 36/106 (33%), Positives = 60/106 (55%)
Frame = +1
Query: 304 ASARAVQRPRKSALVVDDLAVNRLILGTILHKLGFEVLEAENGNQCVDVYSKAHRDIVCV 483
A R +Q R L+V+D A+N+ + L + G EV AENG +C+++ ++H D+ V
Sbjct: 951 ARLRRIQGAR--VLLVEDNALNQQVAVAFLEQAGMEVAVAENGLRCIEMAEQSHYDL--V 1006
Query: 484 FLDLQMPVADGWAATKGMRELDAARARSGSEQQLQVPVVVCTASCL 621
F+D+QMPV DG AT+ +R+ A ++P++ TA +
Sbjct: 1007 FMDIQMPVMDGLEATRQLRQRSAL---------AKLPIIAMTAQAM 1043
>ref|NP_863746.1| sensory transduction histidine kinase [Pirellula sp.]
gi|32442898|emb|CAD71417.1| sensory transduction
histidine kinase [Pirellula sp.]
Length = 993
Score = 62.0 bits (149), Expect = 2e-08
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = +1
Query: 232 PACAAMLQ---GPVMLSPLHCPRPAHLASARAVQRPRKSALVVDDLAVNRLILGTILHKL 402
P A LQ P L+ L + A S+ ++ P K LVVDD NR ++ +L +
Sbjct: 545 PTSIASLQDMVSPEELARLAQEKSAGSVSSELLRLPGKRVLVVDDGEANRRLIELVLKRA 604
Query: 403 GFEVLEAENGNQCVDVYSKAHRD---IVCVFLDLQMPVADGWAATKGMRE 543
G V+ AENG + +D+ ++ + V +D+QMPV DG++AT+ +RE
Sbjct: 605 GATVMSAENGQEALDMIAEGNESGYPYELVLMDMQMPVLDGYSATRLLRE 654
