Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000613A_C01 KCC000613A_c01
(570 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P25058|GAG_BLVAU GAG polyprotein [Contains: Core protein P15 ... 38 0.085
ref|NP_068239.1| PxORF20 peptide [Plutella xylostella granulovir... 37 0.15
gb|AAH37281.1| RNTRE protein [Homo sapiens] 37 0.15
sp|P03344|GAG_BLVJ GAG polyprotein [Contains: Core protein P15 (... 37 0.15
gb|AAH08782.1| I-kappa-B-related protein [Homo sapiens] 37 0.15
>sp|P25058|GAG_BLVAU GAG polyprotein [Contains: Core protein P15 (Matrix protein); Core
protein P24; Core protein P12] gi|279719|pir||FOLJGA gag
polyprotein - bovine leukemia virus (strain Australia)
gi|221053|dbj|BAA00543.1| gag [Bovine leukemia virus]
Length = 392
Score = 38.1 bits (87), Expect = 0.085
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 455 PLRTRPAVGSRTPGRRSVG-HCASPRTCPTGAAARNLAAGRWCRHCPTQMSQASPHP 288
P +PA+ TPG + G +P+ P G R L G W R CPT+ + P P
Sbjct: 315 PKTKQPAILVHTPGPKMPGPRQPAPKRPPPGPCYRCLKEGHWARDCPTKTTGPPPGP 371
>ref|NP_068239.1| PxORF20 peptide [Plutella xylostella granulovirus]
gi|11036815|gb|AAG27318.1|AF270937_20 PxORF20 peptide
[Plutella xylostella granulovirus]
Length = 235
Score = 37.4 bits (85), Expect = 0.15
Identities = 28/85 (32%), Positives = 37/85 (42%), Gaps = 3/85 (3%)
Frame = -2
Query: 413 RRSVGHCASPRTCPTGAAARNLAAGRWC---RHCPTQMSQASPHPGAANPGLH*SKRGPR 243
RRS C SPR CP + R + R C R CP+ SPH G S+R P
Sbjct: 91 RRSAPRCPSPRRCP---SPRRCPSPRRCPSPRRCPSPRRCPSPHVGRRRS----SRRCPS 143
Query: 242 PRQPRAPR*SASCALVAATTSNPAR 168
PR+ + + C + S+P R
Sbjct: 144 PRRRSSTK---RCQSPSKRCSSPRR 165
>gb|AAH37281.1| RNTRE protein [Homo sapiens]
Length = 215
Score = 37.4 bits (85), Expect = 0.15
Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 12/127 (9%)
Frame = -2
Query: 566 PHWAGPTRPECTRRCYCSRRLAEV*PSR---HDCGSGPTRPLRTRPAVGSRTPGRRSV-- 402
P AGP+R E Y L+ V +R D GP RP R+ A G RS
Sbjct: 22 PAAAGPSRRELRNGSY----LSTVPTARLWAADRAGGPGRPSRSGAARRGGGGGYRSALR 77
Query: 401 -------GHCASPRTCPTGAAARNLAAGRWCRHCPTQMSQASPHPGAANPGLH*SKRGPR 243
G S P + AR+L W R P + ++ P A+ P +R P
Sbjct: 78 PIVSLPRGSRRSRAREPGSSPARHLLPPLWKRPPPPRAARPGPRLRASGPARLTGRRQPS 137
Query: 242 PRQPRAP 222
P++P+ P
Sbjct: 138 PQRPQPP 144
>sp|P03344|GAG_BLVJ GAG polyprotein [Contains: Core protein P15 (Matrix protein); Core
protein P24; Core protein P12] gi|74566|pir||FOLJGB gag
polyprotein - bovine leukemia virus
gi|210768|gb|AAA42784.1| gag
Length = 392
Score = 37.4 bits (85), Expect = 0.15
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 455 PLRTRPAVGSRTPGRRSVG-HCASPRTCPTGAAARNLAAGRWCRHCPTQMSQASPHP 288
P +PA+ TPG + G +P+ P G R L G W R CPT+ + P P
Sbjct: 315 PRMKQPALLVHTPGPKMPGPRQPAPKRPPPGPCYRCLKEGHWARDCPTKATGPPPGP 371
>gb|AAH08782.1| I-kappa-B-related protein [Homo sapiens]
Length = 1219
Score = 37.4 bits (85), Expect = 0.15
Identities = 35/100 (35%), Positives = 41/100 (41%)
Frame = -2
Query: 470 SGPTRPLRTRPAVGSRTPGRRSVGHCASPRTCPTGAAARNLAAGRWCRHCPTQMSQASPH 291
S P P P+ +R P V SP G AA +A R RH P S +S
Sbjct: 533 SPPLSPCPEPPSNSTRLPEASQVHVRVSP-----GQAAPAMARPRRSRHGPASSSSSSEG 587
Query: 290 PGAANPGLH*SKRGPRPRQPRAPR*SASCALVAATTSNPA 171
+A P RP Q R PR SA+ VAA T PA
Sbjct: 588 EDSAGPA--------RPSQKR-PRCSATAQRVAAWTPGPA 618
