Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000612A_C01 KCC000612A_c01
(680 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (... 93 3e-18
dbj|BAC58076.2| large tegument protein [Cercopithecine herpesvir... 91 2e-17
ref|XP_324453.1| predicted protein [Neurospora crassa] gi|288813... 90 4e-17
pir||A36128 regulatory protein algP - Pseudomonas aeruginosa 89 8e-17
gb|AAC82365.1| unknown [Myxococcus xanthus] 88 1e-16
>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
vegetative cell wall protein gp1 [Chlamydomonas
reinhardtii]
Length = 555
Score = 93.2 bits (230), Expect = 3e-18
Identities = 74/219 (33%), Positives = 88/219 (39%)
Frame = -3
Query: 672 AAAGTCGCPGARFVLARRGCRPASAVPAPAGRCAAPRRRARRGAGP*VPASGPPRVPPAP 493
A+A PG F P+ A P+PA AP A GP PA P P P
Sbjct: 25 ASANAQCVPGGIFNCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPP 84
Query: 492 VTAPACPPPSVPLLRAAAPPLRWHPAAASPPPAAPSARCSACGCPRHACGWHPARAGSSP 313
AP P P P + APP P+ A P PA PS P+ A SP
Sbjct: 85 SPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSP---------------PSPAPPSP 129
Query: 312 PPAARPCPGPACRAAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPPAPTWPSHP 133
P A P P P A P P +P + PPV P+ + SP PP+PT PS
Sbjct: 130 SPPAPPSPSPPSPAP------PLPP-SPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPS 182
Query: 132 PPATWPAAAEP*LWQSAPAAASSARTRAAAAPAPPSASP 16
PP P+ A P AP S + A P PPS +P
Sbjct: 183 PPVP-PSPAPP---SPAPPVPPSPAPPSPAPPVPPSPAP 217
Score = 84.7 bits (208), Expect = 1e-15
Identities = 70/209 (33%), Positives = 86/209 (40%), Gaps = 10/209 (4%)
Frame = -3
Query: 609 PASAVPAPAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVT---------APACPPPSVP 457
P+ A P+PA AP A P S P PP+P +PA P PS P
Sbjct: 99 PSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPP 158
Query: 456 LLRAAAPPLRWHPAAASPPPAAPSARCSACGCPRH-ACGWHPARAGSSPPPAARPCPGPA 280
+ + +PP+ PA SP P +PS P A P+ A SP P P P P
Sbjct: 159 VPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPP 218
Query: 279 CRAAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPPAPTWPSHPPPATWPAAAEP 100
+ PAP +P A P P PA PS + SP PP+P PS PPA P + P
Sbjct: 219 SPPS------PAPP-SPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPP 271
Query: 99 *LWQSAPAAASSARTRAAAAPAPPSASPA 13
P A T +P P SPA
Sbjct: 272 --PPPPPRPPFPANTPMPPSPPSPPPSPA 298
Score = 84.0 bits (206), Expect = 2e-15
Identities = 66/207 (31%), Positives = 86/207 (40%), Gaps = 8/207 (3%)
Frame = -3
Query: 609 PASAVPAPAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVT------APACPPPSVPLLR 448
P+ + P+PA P A P VP S P VPP+P +P+ P P P
Sbjct: 135 PSPSPPSPAP--PLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPP 192
Query: 447 AAAPPLRWHPAAASP-PPAAPSARCSACGCPRHACGWHPARAGSSPPPAARPCP-GPACR 274
+ APP+ PA SP PP PS + P PA SPP P P PA
Sbjct: 193 SPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPP 252
Query: 273 AAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPPAPTWPSHPPPATWPAAAEP*L 94
+ A + +P P PPP P +P+ P PP+P P P P T P P
Sbjct: 253 SPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSP--PPSPAPPTPPTPPSP-- 308
Query: 93 WQSAPAAASSARTRAAAAPAPPSASPA 13
S P+ + +PAPPS +P+
Sbjct: 309 --SPPSPVPPSPAPVPPSPAPPSPAPS 333
Score = 78.6 bits (192), Expect = 8e-14
Identities = 63/202 (31%), Positives = 79/202 (38%), Gaps = 4/202 (1%)
Frame = -3
Query: 609 PASAVPAPAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVTAPACPPPSVPLLRAAAPPL 430
P S P P A P P+ PP PAP P+ PPS P + APP
Sbjct: 173 PPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPS--PAPPVPPSPAPPSPP---SPAPPS 227
Query: 429 RWHPAAASPPPAAPSARCSACGCPRHACGWHPARAGSSPPPAARPCPGPACRAAARRTWR 250
PA SP P AP + P P PPP+ P P P A
Sbjct: 228 PPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMP 287
Query: 249 PAPEWAPCRSAAPPPVLPAWPSRLAASPGPPAPTWPSHPPPATWPA---AAEP*LWQSAP 79
P+P P A P P P PS + P PAP PS PP+ P+ + P +P
Sbjct: 288 PSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAPPTPSPSP 347
Query: 78 AAASSARTRAAAAPAP-PSASP 16
+ + S + +P+P PS SP
Sbjct: 348 SPSPSPSPSPSPSPSPSPSPSP 369
Score = 72.8 bits (177), Expect = 5e-12
Identities = 64/212 (30%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Frame = -3
Query: 609 PASAVPAPAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVTAPACPPPSVPLLRAAAPPL 430
P+ A P+PA P A P VP S P PP+P P+ P P+ P APP
Sbjct: 187 PSPAPPSPAP--PVPPSPAPPSPAPPVPPSPAPPSPPSPAP-PSPPSPAPPSPSPPAPPS 243
Query: 429 RWHPAAASPPPAAPSARCSACGCPRHACGWHPARA---GSSPPPAARPCPGPACRAAARR 259
P+ A P PA PS + A P P R ++P P + P P P+
Sbjct: 244 PVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPS------- 296
Query: 258 TWRPAPEWAPCR-SAAPPPVLPAWPSRLAASPGPPA-----PTWPSHPPPATWPAAAEP* 97
PAP P S +PP +P P+ + SP PP+ P P+ P P+ P+ +
Sbjct: 297 ---PAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAPPTPSPSPSPSPSP 353
Query: 96 LWQSAPAAASSARTRAAAAPAP-PSASPAVCR 4
+P+ + S +P+P PS SP +
Sbjct: 354 SPSPSPSPSPSPSPSPIPSPSPKPSPSPVAVK 385
Score = 60.5 bits (145), Expect = 2e-08
Identities = 52/158 (32%), Positives = 61/158 (37%), Gaps = 2/158 (1%)
Frame = -3
Query: 477 CPPPSVPLLRAAAPPLRWHPAAASPPPAAPSARCSACGCPRHACGWHPARAGSSPPPAAR 298
CPP P + APP P+ A P PA PS P+ A SPP A
Sbjct: 39 CPPSPAP--PSPAPPSPAPPSPAPPSPAPPSPG-------------PPSPAPPSPPSPAP 83
Query: 297 PCPGPACRAAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPPAPTWPSH--PPPA 124
P P P PAP S APP P P+ + +P PAP P PP
Sbjct: 84 PSPAPPS---------PAPP-----SPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSP 129
Query: 123 TWPAAAEP*LWQSAPAAASSARTRAAAAPAPPSASPAV 10
+ PA P AP S + + P PPS SP V
Sbjct: 130 SPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPV 167
Score = 51.6 bits (122), Expect = 1e-05
Identities = 42/141 (29%), Positives = 53/141 (36%)
Frame = -3
Query: 612 RPASAVPAPAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVTAPACPPPSVPLLRAAAPP 433
+P + P P+ P R P P+ P PAP T P P PS P + PP
Sbjct: 260 KPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPP---SPVPP 316
Query: 432 LRWHPAAASPPPAAPSARCSACGCPRHACGWHPARAGSSPPPAARPCPGPACRAAARRTW 253
PA P PA PS S P P SP P+ P P P+ + +
Sbjct: 317 ---SPAPVPPSPAPPSPAPSPPPSPA------PPTPSPSPSPSPSPSPSPSPSPSPSPSP 367
Query: 252 RPAPEWAPCRSAAPPPVLPAW 190
P P +P S +P V W
Sbjct: 368 SPIPSPSPKPSPSPVAVKLVW 388
>dbj|BAC58076.2| large tegument protein [Cercopithecine herpesvirus 1]
Length = 3326
Score = 90.5 bits (223), Expect = 2e-17
Identities = 86/225 (38%), Positives = 96/225 (42%), Gaps = 16/225 (7%)
Frame = -3
Query: 648 PGARFVLARRGCRPASAVPAPAGRCAAPRRRARRGA-------------GP*VPASGPPR 508
PG R L RR R PAP+ PRRRA R A GP P P
Sbjct: 2753 PG-RVSLPRRASRQGR--PAPSSPLQRPRRRAARPAVGSLTNLADPHPPGPETPTPTSPT 2809
Query: 507 VPPAPVTAPACPPPSVPLLRAAAPPLRWHPAAASPPPAAPSARCSACGCPRHACGWHPAR 328
P TA A P P P + A P PA +P AA + R SA P A PA
Sbjct: 2810 ANPHATTASATPAP--PPVAATGPTRPTSPATPTPTVAA-AGRASAPPAP--AAPAAPAA 2864
Query: 327 AGSSPPPAARPCPG-PACRAAARRTWRPAPEWAPCRSAAPP-PVLPAWPSRLAASPGPPA 154
+ PAA P PA AA PA AP AAP P PA P+ AA P A
Sbjct: 2865 PAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAA 2924
Query: 153 PTWPSHPPPATWPAAAEP*LWQSAPAA-ASSARTRAAAAPAPPSA 22
P P+ P PA PAA +APAA A+ A A AAPA P+A
Sbjct: 2925 PAAPAAPAPAAVPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAA 2969
Score = 80.1 bits (196), Expect = 3e-14
Identities = 73/208 (35%), Positives = 83/208 (39%), Gaps = 6/208 (2%)
Frame = -3
Query: 621 RGCRPASAVP--APAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVTAPACPPPSVPLLR 448
R PA+ P A AGR +AP PA P P AP A P+ P
Sbjct: 2833 RPTSPATPTPTVAAAGRASAP------------PAPAAPAAPAAPAAPAAPAAPAAP--- 2877
Query: 447 AAAPPLRWHPAAASPP--PAAPSARCSACGCPRHACGWHPARAGSSPPPAARPCP-GPAC 277
AAP PAA + P PAAP+A PA + PAA P PA
Sbjct: 2878 -AAPAAPAAPAAPAAPAAPAAPAA---------------PAAPAAPAAPAAPAAPAAPAA 2921
Query: 276 RAAARRTWRPAPEWAPCRSAAP-PPVLPAWPSRLAASPGPPAPTWPSHPPPATWPAAAEP 100
AA PAP P AAP P PA P+ AA P AP P+ P PA P
Sbjct: 2922 PAAPAAPAAPAPAAVPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAPAAVPVVV-- 2979
Query: 99 *LWQSAPAAASSARTRAAAAPAPPSASP 16
AP A +A T + APA ASP
Sbjct: 2980 ----PAPTATLTATTTTSPAPAATPASP 3003
Score = 73.6 bits (179), Expect = 3e-12
Identities = 80/233 (34%), Positives = 90/233 (38%), Gaps = 13/233 (5%)
Frame = -3
Query: 672 AAAGTCGCPGARFVLARRGCRPASAVPAPAGRCAAPRRRARRGA--GP*VPASGPPRVPP 499
AAAG P A A A A PA AAP A A P PA+ P
Sbjct: 2845 AAAGRASAPPAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAP 2904
Query: 498 APVTAPACPP-PSVPLLRAA-APPLRWHPAAASPPPAAPSARCSACGCPRHACGWHPAR- 328
A APA P P+ P AA A P PAA PAAP+A + A PA
Sbjct: 2905 AAPAAPAAPAAPAAPAAPAAPAAPAAPAPAAVPAAPAAPAAPAAPAAPAAPAAPAAPAAP 2964
Query: 327 -AGSSPPPAARP--CPGPACRAAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPP 157
A ++P PAA P P P A T PAP P A+P P +P
Sbjct: 2965 AAPAAPAPAAVPVVVPAPTATLTATTTTSPAPAATP---ASPVP-----------TPTSS 3010
Query: 156 APTWPSHPPPATWPAAAEP*LWQSAPAAASSARTRA-----AAAPAPPSASPA 13
PT PS PP P+ A + A R RA AA PA PS PA
Sbjct: 3011 LPTPPSKPPAFFQPSLAT----GGSVAPGGDFRRRAPSRPTAAVPAAPSRPPA 3059
Score = 72.4 bits (176), Expect = 6e-12
Identities = 72/210 (34%), Positives = 76/210 (35%), Gaps = 8/210 (3%)
Frame = -3
Query: 624 RRGCRPASAVPAPAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVTAPACPPPSVPLLRA 445
RR R A A P G + R G P PAS PP P AP T A P P P
Sbjct: 382 RRSARHA-ATPFSRGSGGDEQTRPAAGPRPPTPASRPP-TPGAPPTPGAPPTPGAPPT-P 438
Query: 444 AAPPLRWHPAAASPPPAAPSARCSACGCPRHACGWHPARAGSSPPPAARPCPGPACRAAA 265
APP P AS P P+ R P G P AG P PA RP P PA R
Sbjct: 439 GAPPTPAGPTTASSEPPTPAGR------PPTPAGRPPTPAGRPPTPAGRP-PTPAGRP-- 489
Query: 264 RRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPPAPTWPSHPPPATWPAAAEP*LWQS 85
P P P A PP P P P PT S PP A P +
Sbjct: 490 -----PTPAGRPPTPAGRPPTPAGRP------PTPANPTASSEPPTPNPEGAPAPSSNEQ 538
Query: 84 APAAASSART--------RAAAAPAPPSAS 19
PAAAS+ R P PP S
Sbjct: 539 PPAAASTDEATQKALDALRDRQPPEPPCGS 568
Score = 65.5 bits (158), Expect = 7e-10
Identities = 77/240 (32%), Positives = 92/240 (38%), Gaps = 21/240 (8%)
Frame = -3
Query: 669 AAGTCGCPGARFVLARRGCRPASAVPAP--AGRCAAP--RRRARRGAGP*VPASGPPRVP 502
A+ G P A R P +VP P A R + P + RARR P P S PR P
Sbjct: 2623 ASDDAGDPPPPLPPAARPAAPDRSVPPPRPAPRPSEPAVQSRARRPDAP--PQSARPRTP 2680
Query: 501 ---PAPVTAPACPPPSVPLLRAAAPPLRWHPAAASPPPAAPSARCSACGCPRHACGWHPA 331
P P AP+ PPS P PP P PPP PS R + G A P+
Sbjct: 2681 RDDPGPPAAPSTLPPSPP------PPA---PHPPDPPPPDPSPRPNELGGGETAAA--PS 2729
Query: 330 RAGSSPPPAAR----------PCPGP-ACRAAARRTWRPAPE---WAPCRSAAPPPVLPA 193
PP R P PG + A R RPAP P R AA P V
Sbjct: 2730 APDPPPPQTVRAPERPRDDRAPAPGRVSLPRRASRQGRPAPSSPLQRPRRRAARPAV--- 2786
Query: 192 WPSRLAASPGPPAPTWPSHPPPATWPAAAEP*LWQSAPAAASSARTRAAAAPAPPSASPA 13
A P PP P P+ P P A + P A++ TR +PA P+ + A
Sbjct: 2787 GSLTNLADPHPPGPETPTPTSPTANPHATTASATPAPPPVAATGPTR-PTSPATPTPTVA 2845
Score = 64.7 bits (156), Expect = 1e-09
Identities = 69/201 (34%), Positives = 77/201 (37%), Gaps = 25/201 (12%)
Frame = -3
Query: 546 GAGP*VPASGPP--RVPPAPVTAPACPPPSVPLLRAAAPP-LRW---------HPAAASP 403
GAGP PP PP P P P+ P L W A P
Sbjct: 2572 GAGPDPGGGAPPDPEAPPPPSHQTPAILPDEPVGETVHPRMLTWIRGLEELASDDAGDPP 2631
Query: 402 PPAAPSARCSACGCPRHACGWHPARAGSSPPPAARPCPGPACRAAARRTWRPAPEWAPCR 223
PP P+AR +A P R+ P PA RP PA ++ ARR P P+ A R
Sbjct: 2632 PPLPPAARPAA-----------PDRSVPPPRPAPRPSE-PAVQSRARRPDAP-PQSARPR 2678
Query: 222 SAAPPPVLPAWPSRLAASPGPPAPTWPSHPPPATWPAAAEP*LWQSAPAAASSA------ 61
+ P PA PS L SP PPAP P PPP P E L AAA SA
Sbjct: 2679 TPRDDPGPPAAPSTLPPSPPPPAPHPPDPPPPDPSPRPNE--LGGGETAAAPSAPDPPPP 2736
Query: 60 -------RTRAAAAPAPPSAS 19
R R APAP S
Sbjct: 2737 QTVRAPERPRDDRAPAPGRVS 2757
Score = 60.8 bits (146), Expect = 2e-08
Identities = 80/264 (30%), Positives = 91/264 (34%), Gaps = 44/264 (16%)
Frame = -3
Query: 672 AAAGTCGCPGARFVLARRGCRPASAVPAPAGRCAAPRRRARRGAGP*VPASGPPRVPPAP 493
AA P A A A A PAPA AAP A A P PA+ PA
Sbjct: 2905 AAPAAPAAPAAPAAPAAPAAPAAPAAPAPAAVPAAPAAPAAPAA-PAAPAAPAAPAAPAA 2963
Query: 492 VTAPACPPPS-VPLLRAAAPPLRWHPAAASPPPAA---------------PSARCSACGC 361
APA P P+ VP++ A SP PAA P ++ A
Sbjct: 2964 PAAPAAPAPAAVPVVVPAPTATLTATTTTSPAPAATPASPVPTPTSSLPTPPSKPPAFFQ 3023
Query: 360 PRHACGWHPARAGS----SPPPAARPCPGPACRAAARRTWRPAPEWAPCRSAAPP----- 208
P A G A G +P P R ARR RPA + A PP
Sbjct: 3024 PSLATGGSVAPGGDFRRRAPSRPTAAVPAAPSRPPARRLARPAVSRSTESFALPPDELAR 3083
Query: 207 ---PVLPAWPSR-----LAASPGPPAPTW---PSHPPPATWPAAAE--------P*LWQS 85
P PA P+ +A P PP P PS P PAAA P L
Sbjct: 3084 PRTPEAPAPPTETEEAPVAERPAPPEPPQGRPPSPAAPDAGPAAASGPSGGVPAPRLGAL 3143
Query: 84 APAAASSARTRAAAAPAPPSASPA 13
P + R R PAPP PA
Sbjct: 3144 VPGRVAVPR-RQIPPPAPPREIPA 3166
Score = 45.1 bits (105), Expect = 0.001
Identities = 58/183 (31%), Positives = 63/183 (33%), Gaps = 2/183 (1%)
Frame = -3
Query: 669 AAGTCGCPGARFVLARRGCRPASAVPAPAGRCAAPRRRARRGAGP*VPASGPP-RVPPAP 493
A G PG F R RP +AVPA A R ARR A P V S +PP
Sbjct: 3027 ATGGSVAPGGDF-RRRAPSRPTAAVPA-----APSRPPARRLARPAVSRSTESFALPPDE 3080
Query: 492 VTAPACPPPSVPLLRAAAPPLRWHPAAASPPPAAPSARCSACGCPRHACGWHPARAGSSP 313
+ P P P P+ PA PP P R P
Sbjct: 3081 LARPRTPEAPAPPTETEEAPVAERPA----PPEPPQGR---------------------P 3115
Query: 312 PPAARPCPGPACRAAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPPAP-TWPSH 136
P A P GPA A+ PAP R A P A P R P PP PS
Sbjct: 3116 PSPAAPDAGPAA-ASGPSGGVPAP-----RLGALVPGRVAVPRRQIPPPAPPREIPAPSP 3169
Query: 135 PPP 127
PPP
Sbjct: 3170 PPP 3172
Score = 43.5 bits (101), Expect = 0.003
Identities = 51/157 (32%), Positives = 56/157 (35%), Gaps = 4/157 (2%)
Frame = -3
Query: 474 PPPSVPLLRAAAPPLRWHPAAAS-PPPAAPSARCSACGCPRHACGWHPAR--AGSSPP-P 307
PP S+ L A R HP AS P SAR +A R + G R AG PP P
Sbjct: 358 PPSSLEDLSAG----RHHPKRASLPTRTRRSARHAATPFSRGSGGDEQTRPAAGPRPPTP 413
Query: 306 AARPCPGPACRAAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPPAPTWPSHPPP 127
A+RP P A P P P A P P P S +P PT PP
Sbjct: 414 ASRP---PTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGRPPTPAGRPPT 470
Query: 126 ATWPAAAEP*LWQSAPAAASSARTRAAAAPAPPSASP 16
PA P P A T A P P P
Sbjct: 471 ---PAGRPPTPAGRPPTPAGRPPTPAGRPPTPAGRPP 504
Score = 41.6 bits (96), Expect = 0.011
Identities = 45/136 (33%), Positives = 51/136 (37%)
Frame = -3
Query: 627 ARRGCRPASAVPAPAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVTAPACPPPSVPLLR 448
A R PA P PAGR P R P PA PP P T PA PP+
Sbjct: 458 AGRPPTPAGRPPTPAGRPPTPAGR------PPTPAGRPPTPAGRPPT-PAGRPPT----P 506
Query: 447 AAAPPLRWHPAAASPPPAAPSARCSACGCPRHACGWHPARAGSSPPPAARPCPGPACRAA 268
A PP +P A+S PP P A PA + + PPAA +A
Sbjct: 507 AGRPPTPANPTASSEPPTPN---------PEGA----PAPSSNEQPPAAASTDEATQKAL 553
Query: 267 ARRTWRPAPEWAPCRS 220
R PE PC S
Sbjct: 554 DALRDRQPPE-PPCGS 568
Score = 37.4 bits (85), Expect = 0.21
Identities = 58/226 (25%), Positives = 70/226 (30%), Gaps = 34/226 (15%)
Frame = -3
Query: 591 APAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVTAPACPPPSVPLLRAAAPPLRWHPAA 412
APAG A R P PP+ PP P + P AA W A
Sbjct: 254 APAGAVAVGEEAGR---APAAARKAPPQTPP--------PKAAAPEPAGAADAGVWGAAL 302
Query: 411 ASPPPA--APSARCSACG----------------CPR----HACGWHPARAGSSPPP--- 307
A P A AP+ SA G PR + G+ R + PP
Sbjct: 303 AGAPLALPAPAPSDSAGGDDAEDDEDGAMEVVSPLPRPNQHYPLGFSKRRRPTWTPPSSL 362
Query: 306 ----AARPCPGPAC-----RAAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPPA 154
A R P A R +AR P + P P P+ + P P A
Sbjct: 363 EDLSAGRHHPKRASLPTRTRRSARHAATPFSRGSGGDEQTRPAAGPRPPTPASRPPTPGA 422
Query: 153 PTWPSHPPPATWPAAAEP*LWQSAPAAASSARTRAAAAPAPPSASP 16
P P PP P + P ASS A P P+ P
Sbjct: 423 PPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGRPPTPAGRP 468
Score = 34.3 bits (77), Expect = 1.8
Identities = 25/78 (32%), Positives = 32/78 (40%), Gaps = 8/78 (10%)
Frame = -3
Query: 609 PASAVPAPA------GRCAAPRRRARRGAGP*VPASGPPRVPPAPVTAPACPPP--SVPL 454
P+ VPAP GR A PRR+ PP PP + AP+ PPP P
Sbjct: 3131 PSGGVPAPRLGALVPGRVAVPRRQI------------PPPAPPREIPAPSPPPPRSHAPR 3178
Query: 453 LRAAAPPLRWHPAAASPP 400
+ + A L H + P
Sbjct: 3179 VSSWASSLALHEEPDAGP 3196
>ref|XP_324453.1| predicted protein [Neurospora crassa] gi|28881381|emb|CAD70422.1|
conserved hypothetical protein [Neurospora crassa]
gi|28918167|gb|EAA27846.1| predicted protein [Neurospora
crassa]
Length = 429
Score = 89.7 bits (221), Expect = 4e-17
Identities = 74/205 (36%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
Frame = +2
Query: 17 GEAEGGAGAAAARVRALLAAAGADCQS*GSAAAGQVAGGGCEGQVGAGGPGEAARREGQA 196
G A+GGA A A G G+AA G AGGG + GA G AA G A
Sbjct: 137 GAAKGGASKGGASKGGAAAGGG------GAAAGGATAGGGGASKGGASKGGAAAGGGGAA 190
Query: 197 G---RTGGGAAERHGAHSGAGRQVRRAAARQA----GPGQGRAAGGGELPARAGCHPQA* 355
GGGAA + GA G AAA A G G AA GG A+ G
Sbjct: 191 AGGATAGGGAASKGGASKGGAAAGGGAAAGGATAGGGAAAGGAAAGGG-AAKGGASKGGA 249
Query: 356 RGHPQAEHRADGAAGGGEAAAGCHRSGGAAARSSGTDGGGHAGAVTGAGGTRGGPEAGTH 535
A AAGG A G +GG +A+ + GG AGA +G GG GG AG
Sbjct: 250 SKGGAAAGGGGAAAGGATAGGGASAAGGGSAKGGASKGGAAAGAASGKGGASGGAAAG-- 307
Query: 536 GPAPRRARRRGAAQRPAGAGTAEAG 610
G + + GA++ A AG A AG
Sbjct: 308 GGGGDSSAKGGASKGGAAAGGATAG 332
Score = 88.6 bits (218), Expect = 8e-17
Identities = 69/199 (34%), Positives = 82/199 (40%), Gaps = 1/199 (0%)
Frame = +2
Query: 17 GEAEGGAGAAAARVRALLAAAGADCQS*GSAAAGQVAGGGCEGQVGAGGPGEAARREGQA 196
G A GG AA AAAG G+A G GG +G AGG G AA
Sbjct: 210 GAAAGGGAAAGGATAGGGAAAGGAAAGGGAAKGGASKGGASKGGAAAGGGGAAA-----G 264
Query: 197 GRTGGGAAERHGAHSGAGRQVRRAAARQAGPGQGRAAGGGELPARAGCHPQA*RGHPQAE 376
G T GG A G S G + AA A G+G A+GG G +
Sbjct: 265 GATAGGGASAAGGGSAKGGASKGGAAAGAASGKGGASGGAAAGGGGG------------D 312
Query: 377 HRADGAAGGGEAAA-GCHRSGGAAARSSGTDGGGHAGAVTGAGGTRGGPEAGTHGPAPRR 553
A G A G AAA G GG AA+ + GG G + G ++GG AG G A
Sbjct: 313 SSAKGGASKGGAAAGGATAGGGGAAKGGASKGGASKGGDSKGGASKGGAAAGGGGAAAGG 372
Query: 554 ARRRGAAQRPAGAGTAEAG 610
A G A AG G+A+ G
Sbjct: 373 ATAGGGAS-AAGGGSAKGG 390
Score = 88.2 bits (217), Expect = 1e-16
Identities = 69/222 (31%), Positives = 87/222 (39%)
Frame = +2
Query: 11 TAGEAEGGAGAAAARVRALLAAAGADCQS*GSAAAGQVAGGGCEGQVGAGGPGEAARREG 190
TA + + A A A + G A+ G GG +G GG + +G
Sbjct: 92 TAASTTASSSGSTASSGTTAGGATAGGATKGGASKGADKGGASKGGAAKGGASKGGASKG 151
Query: 191 QAGRTGGGAAERHGAHSGAGRQVRRAAARQAGPGQGRAAGGGELPARAGCHPQA*RGHPQ 370
A GGGAA GA +G G A + G +G AA GG A G
Sbjct: 152 GAAAGGGGAA-AGGATAGGG------GASKGGASKGGAAAGGGGAAAGGATAGGGAASKG 204
Query: 371 AEHRADGAAGGGEAAAGCHRSGGAAARSSGTDGGGHAGAVTGAGGTRGGPEAGTHGPAPR 550
+ AAGGG AA G GGAAA + GG G + G ++GG AG G A
Sbjct: 205 GASKGGAAAGGGAAAGGATAGGGAAAGGAAAGGGAAKGGASKGGASKGGAAAGGGGAAAG 264
Query: 551 RARRRGAAQRPAGAGTAEAGRHPRRARTNRAPGQPQVPAAAA 676
A G A AG G+A+ G A A G+ AA
Sbjct: 265 GATAGGGAS-AAGGGSAKGGASKGGAAAGAASGKGGASGGAA 305
Score = 78.6 bits (192), Expect = 8e-14
Identities = 66/200 (33%), Positives = 81/200 (40%), Gaps = 2/200 (1%)
Frame = +2
Query: 17 GEAEGGAGAAAARVRALLAAAGADCQS*GSAAAGQVAGGGCEGQVGAGGPGEAARREGQA 196
G A GG A + + GA G+AA G AGGG G G A++ A
Sbjct: 232 GAAAGGGAAKGGASKGGASKGGAAAGGGGAAAGGATAGGGASAAGGGSAKGGASKGGAAA 291
Query: 197 GRTGG--GAAERHGAHSGAGRQVRRAAARQAGPGQGRAAGGGELPARAGCHPQA*RGHPQ 370
G G GA+ A G G + A + G G A GG A+ G A +G
Sbjct: 292 GAASGKGGASGGAAAGGGGGDSSAKGGASKGGAAAGGATAGGGGAAKGG----ASKGGAS 347
Query: 371 AEHRADGAAGGGEAAAGCHRSGGAAARSSGTDGGGHAGAVTGAGGTRGGPEAGTHGPAPR 550
+ G A G AAAG GG AA T GGG + A G G +GG G G A
Sbjct: 348 KGGDSKGGASKGGAAAG----GGGAAAGGATAGGGASAA--GGGSAKGGASKG--GAASG 399
Query: 551 RARRRGAAQRPAGAGTAEAG 610
G+A+ A G A AG
Sbjct: 400 GGAAGGSAKGGASKGGAAAG 419
Score = 71.6 bits (174), Expect = 1e-11
Identities = 55/174 (31%), Positives = 70/174 (39%), Gaps = 1/174 (0%)
Frame = +2
Query: 11 TAGEAEGGAGAAAARVRALLAAAGADCQS*-GSAAAGQVAGGGCEGQVGAGGPGEAARRE 187
TAG AG +A+ A A A S G A+ G AGGG GG +
Sbjct: 267 TAGGGASAAGGGSAKGGASKGGAAAGAASGKGGASGGAAAGGGGGDSSAKGGASKGGAAA 326
Query: 188 GQAGRTGGGAAERHGAHSGAGRQVRRAAARQAGPGQGRAAGGGELPARAGCHPQA*RGHP 367
G A GGGAA+ + GA + + G +G AA GG A G
Sbjct: 327 GGATAGGGGAAKGGASKGGAS----KGGDSKGGASKGGAAAGGGGAAAGG---------- 372
Query: 368 QAEHRADGAAGGGEAAAGCHRSGGAAARSSGTDGGGHAGAVTGAGGTRGGPEAG 529
AGGG +AAG + G A++ GGG AG G ++GG AG
Sbjct: 373 -------ATAGGGASAAGGGSAKGGASKGGAASGGGAAGGSAKGGASKGGAAAG 419
Score = 70.1 bits (170), Expect = 3e-11
Identities = 62/182 (34%), Positives = 73/182 (40%), Gaps = 7/182 (3%)
Frame = +2
Query: 17 GEAEGGAGAAAARVRA---LLAAAGADCQ---S*GSAAAGQVAG-GGCEGQVGAGGPGEA 175
G A GG GAAA A AA G + S G AAAG +G GG G AGG G
Sbjct: 253 GAAAGGGGAAAGGATAGGGASAAGGGSAKGGASKGGAAAGAASGKGGASGGAAAGGGGGD 312
Query: 176 ARREGQAGRTGGGAAERHGAHSGAGRQVRRAAARQAGPGQGRAAGGGELPARAGCHPQA* 355
+ +G A + G A GA +G G + A++ G + GG A A
Sbjct: 313 SSAKGGASKGGAAAG---GATAGGGGAAKGGASKGGASKGGDSKGGASKGGAAAGGGGAA 369
Query: 356 RGHPQAEHRADGAAGGGEAAAGCHRSGGAAARSSGTDGGGHAGAVTGAGGTRGGPEAGTH 535
G A A AAGGG A G GGAA+ G GA G GG
Sbjct: 370 AGGATAGGGAS-AAGGGSAKGGAS-KGGAASGGGAAGGSAKGGASKGGAAAGGGASGSAG 427
Query: 536 GP 541
GP
Sbjct: 428 GP 429
Score = 50.4 bits (119), Expect = 2e-05
Identities = 46/141 (32%), Positives = 60/141 (41%), Gaps = 7/141 (4%)
Frame = +2
Query: 14 AGEAEGGA-GAAAARVRALLAAAGADCQS*GSAAAGQVAGGGCEGQVGA--GGPGEAARR 184
A +GGA G AAA ++A G+AA G AGGG + GA GG +
Sbjct: 293 AASGKGGASGGAAAGGGGGDSSAKGGASKGGAAAGGATAGGGGAAKGGASKGGASKGGDS 352
Query: 185 EGQAGR----TGGGAAERHGAHSGAGRQVRRAAARQAGPGQGRAAGGGELPARAGCHPQA 352
+G A + GGG A GA +G G + + G +G AA GG AG
Sbjct: 353 KGGASKGGAAAGGGGAAAGGATAGGGASAAGGGSAKGGASKGGAASGG---GAAG----- 404
Query: 353 *RGHPQAEHRADGAAGGGEAA 415
G + GAA GG A+
Sbjct: 405 --GSAKGGASKGGAAAGGGAS 423
Score = 45.4 bits (106), Expect = 8e-04
Identities = 40/132 (30%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Frame = +2
Query: 236 HSGAGRQVRRAAARQAGPGQGRAAGG---GELPARAGCHPQA*RGHPQAEHRADGAAGGG 406
H G+ AA+ A A+ G G A A +G + GAA GG
Sbjct: 83 HRGSAASSATAASTTASSSGSTASSGTTAGGATAGGATKGGASKGADKGGASKGGAAKGG 142
Query: 407 EAAAGCHRSGGAAARSSGTDGGGHA--GAVTGAGGTRGGPEAGTHGPAPRRARRRGAAQR 580
+ G + G AA GG A G + G ++GG AG G A A G A
Sbjct: 143 ASKGGASKGGAAAGGGGAAAGGATAGGGGASKGGASKGGAAAGGGGAAAGGATAGGGAAS 202
Query: 581 PAGA--GTAEAG 610
GA G A AG
Sbjct: 203 KGGASKGGAAAG 214
Score = 33.1 bits (74), Expect = 4.0
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 14 AGEAEGGAGAAAARVRALLAAAGADCQS*GSAAAGQVAGGGCEGQVGAGG--PGEAARRE 187
AG A G GA +AAG G++ G +GGG G GG G AA
Sbjct: 370 AGGATAGGGA---------SAAGGGSAKGGASKGGAASGGGAAGGSAKGGASKGGAAAGG 420
Query: 188 GQAGRTGG 211
G +G GG
Sbjct: 421 GASGSAGG 428
>pir||A36128 regulatory protein algP - Pseudomonas aeruginosa
Length = 352
Score = 88.6 bits (218), Expect = 8e-17
Identities = 77/225 (34%), Positives = 102/225 (45%), Gaps = 8/225 (3%)
Frame = -3
Query: 669 AAGTCGCPGARFVLARRGCRPASAVPA-PAGRCAAPRRRARRGAGP*VPASGPPRVPPAP 493
AA P + V A+R +PA+ A PA + AA + A P + P PA
Sbjct: 142 AAKAAAKPAVKTVAAKRAAKPAAKPAAKPAAKPAAKTAAGKPAAKPAAKPAAKPAAKPAA 201
Query: 492 VTA---PACPPPSVPLLRAAAPPLRWHPAAASPPPAAPSARCSACGCPRHACGWHPARAG 322
TA PA P + P+ + AA P AA+ P A P+A+ +A + PA
Sbjct: 202 KTAAAKPAAKPAAKPVAKPAAKPAA--KTAAAKPAAKPAAKPAAKPAAK------PAAKT 253
Query: 321 SSPPPAARPCPGPACRAAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPPAPTWP 142
++ PAA+P PA + AA+ +PA + AA P PA A P P
Sbjct: 254 AAAKPAAKPAAKPAAKPAAKHVAKPAAAKPAAKPAAKPAAKPA-----AKPAAKPVAAKP 308
Query: 141 SHPPPATWPAAAEP*LWQSAPAAASSARTRAAAA----PAPPSAS 19
+ PAT P AA+P SAPAAASSA + AA AP SAS
Sbjct: 309 AAAKPATAP-AAKPAATPSAPAAASSAASATPAAGSNGAAPTSAS 352
Score = 59.7 bits (143), Expect = 4e-08
Identities = 52/163 (31%), Positives = 72/163 (43%), Gaps = 2/163 (1%)
Frame = -3
Query: 495 PVTAPACPPPSVPLLRAAAPPLRWHPAA--ASPPPAAPSARCSACGCPRHACGWHPARAG 322
P T PA + P ++ A PAA A+ P A P+A+ +A G P PA
Sbjct: 137 PATKPAAKAAAKPAVKTVAAKRAAKPAAKPAAKPAAKPAAK-TAAGKPAAKPAAKPAAKP 195
Query: 321 SSPPPAARPCPGPACRAAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPPAPTWP 142
++ P A PA + AA+ +PA + A +AA P PA ++ AA P
Sbjct: 196 AAKPAAKTAAAKPAAKPAAKPVAKPAAKPAAKTAAAKPAAKPA--AKPAAKPAAKPAAKT 253
Query: 141 SHPPPATWPAAAEP*LWQSAPAAASSARTRAAAAPAPPSASPA 13
+ PA PAA PAA +A+ A A A P+A PA
Sbjct: 254 AAAKPAAKPAAK--------PAAKPAAKHVAKPAAAKPAAKPA 288
Score = 59.3 bits (142), Expect = 5e-08
Identities = 65/216 (30%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Frame = -3
Query: 627 ARRGCRPASAVPA-PAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVTA---PACPPPSV 460
A+ +PA+ A PA + A +R A+ A P + P PA TA PA P +
Sbjct: 135 AKPATKPAAKAAAKPAVKTVAAKRAAKPAAKP----AAKPAAKPAAKTAAGKPAAKPAAK 190
Query: 459 PLLRAAAPPLRWHPAAASPPPAAPSARCSACGCPRHACGWHPARAGSSPPPAARPCPGPA 280
P + AA P AA+ P A P+A+ P A+P PA
Sbjct: 191 PAAKPAAKPAA--KTAAAKPAAKPAAK-----------------------PVAKPAAKPA 225
Query: 279 CR-AAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPGPPAPTWPSHPPPA---TWPA 112
+ AAA+ +PA + AA P PA AA P P+ P A PA
Sbjct: 226 AKTAAAKPAAKPA-----AKPAAKPAAKPA-AKTAAAKPAAKPAAKPAAKPAAKHVAKPA 279
Query: 111 AAEP*LWQSAPAAASSARTRAAAAPAPPSASPAVCR 4
AA+P + PAA +A+ A A P +A PA +
Sbjct: 280 AAKP---AAKPAAKPAAKPAAKPAAKPVAAKPAAAK 312
>gb|AAC82365.1| unknown [Myxococcus xanthus]
Length = 542
Score = 88.2 bits (217), Expect = 1e-16
Identities = 76/216 (35%), Positives = 85/216 (39%), Gaps = 13/216 (6%)
Frame = -3
Query: 621 RGCRPASAVPAPAGR----CAAPRRRARRGAGP*VPASGPPRVPPAPVTAPACPPPSVPL 454
RG R S P A R C AP R ARR GPPR CP P
Sbjct: 70 RGSRHRSFRPTCARRSGRRCPAPSRHARRNPAGPSRRCGPPRKSTPTRCCTPCPAPPRCR 129
Query: 453 LRAAAPPLRWHPAAASPPPAAPSARCSACGCPRHACGWHPARA--GSSP-PPAARPCPGP 283
R +AP P+A P A + C++ CP CG P G+ P PP+ P P P
Sbjct: 130 ARPSAPA----PSAGRTCPTAGPSSCASGCCPTGRCGSAPGPTPHGAEPSPPSQSPSPAP 185
Query: 282 ACRAAARRTWRPAPEWAPCRSAAPPPVLPAWPSRLAASPG------PPAPTWPSHPPPAT 121
A RRT P P A A P LP P R PG P T SHPPP
Sbjct: 186 ASSGGRRRT-HPRPARASAAGATAPACLP--PPRCCGRPGTGCARTAPPSTSASHPPPPR 242
Query: 120 WPAAAEP*LWQSAPAAASSARTRAAAAPAPPSASPA 13
P P +PAAA A A P PP +PA
Sbjct: 243 SPGT--PPRASGSPAAA-PAPPSPACRPPPPGTTPA 275
Score = 55.1 bits (131), Expect = 1e-06
Identities = 55/191 (28%), Positives = 77/191 (39%), Gaps = 8/191 (4%)
Frame = -3
Query: 561 RRARRGAGP*VPASGPPRVPPAPV---TAPACPPPSVPLLRAAAPPLRWHPAAASP--PP 397
+ +R G+ PA G P PP + T P PP P A+ PP + P +P PP
Sbjct: 3 KTSRDGSCHGTPAPGRPFPPPCLLSERTPPGARPP--PTETASYPPPQAVPGPCAPRAPP 60
Query: 396 AAPSARCSACGCPRHACGWHPARAGSSPPPAARPCPGPACRAAARRTWRPAPEWAPCRSA 217
+P R RH H + + + R CP P+ R A R P+ P R +
Sbjct: 61 RSPPPR------RRHRGSRHRSFRPTCARRSGRRCPAPS-RHARRNPAGPSRRCGPPRKS 113
Query: 216 APP---PVLPAWPSRLAASPGPPAPTWPSHPPPATWPAAAEP*LWQSAPAAASSARTRAA 46
P PA P R A P PAP+ P P++ + ++ T
Sbjct: 114 TPTRCCTPCPA-PPRCRARPSAPAPS-AGRTCPTAGPSSCASGCCPTGRCGSAPGPTPHG 171
Query: 45 AAPAPPSASPA 13
A P+PPS SP+
Sbjct: 172 AEPSPPSQSPS 182
Score = 46.6 bits (109), Expect = 3e-04
Identities = 51/182 (28%), Positives = 58/182 (31%), Gaps = 14/182 (7%)
Frame = -3
Query: 648 PGARFVLARRGCRPASAVPAPAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVTAPACPP 469
P A A R C A +G C R + G P PP P+P P
Sbjct: 132 PSAPAPSAGRTCPTAGPSSCASGCCPTGRCGSAPGPTPHGAEPSPPSQSPSPA-----PA 186
Query: 468 PSVPLLRAAAPPLRWHPAAASPPPAAPSARCSACGCPRHACGWH--PARAGSSPPPAARP 295
S R P R A A+ P P RC CG P C P+ + S PPP P
Sbjct: 187 SSGGRRRTHPRPARASAAGATAPACLPPPRC--CGRPGTGCARTAPPSTSASHPPPPRSP 244
Query: 294 --------CPGPACRAAARRTWRPAPEWAPCR----SAAPPPVLPAWPSRLAASPGPPAP 151
P A PAP CR P P A P+ SP
Sbjct: 245 GTPPRASGSPAAA----------PAPPSPACRPPPPGTTPAPRNAALPALPCISPSRQRA 294
Query: 150 TW 145
TW
Sbjct: 295 TW 296
Score = 32.0 bits (71), Expect = 8.9
Identities = 27/78 (34%), Positives = 29/78 (36%), Gaps = 3/78 (3%)
Frame = -3
Query: 657 CGCPGARFVLARRGCRPASAVPAPAGRCAAPRRRARRGAGP*VPASGPPRVPPAPVTAPA 478
CG PG AS P P PR ASG P PAP +PA
Sbjct: 218 CGRPGTGCARTAPPSTSASHPPPPRSPGTPPR------------ASGSPAAAPAP-PSPA 264
Query: 477 C---PPPSVPLLRAAAPP 433
C PP + P R AA P
Sbjct: 265 CRPPPPGTTPAPRNAALP 282
