Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000607A_C01 KCC000607A_c01
(541 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_821703.1| putative integral membrane protein [Streptomyce... 34 1.4
ref|NP_519316.1| HYPOTHETICAL PROTEIN [Ralstonia solanacearum] g... 33 2.4
ref|NP_860464.1| valyl-tRNA synthetase [Helicobacter hepaticus A... 33 3.2
ref|NP_631754.1| conserved hypothetical protein [Streptomyces co... 33 3.2
ref|NP_079162.1| hypothetical protein FLJ14280 [Homo sapiens] gi... 33 3.2
>ref|NP_821703.1| putative integral membrane protein [Streptomyces avermitilis
MA-4680] gi|29604167|dbj|BAC68238.1| putative integral
membrane protein [Streptomyces avermitilis MA-4680]
Length = 272
Score = 33.9 bits (76), Expect = 1.4
Identities = 25/70 (35%), Positives = 28/70 (39%), Gaps = 1/70 (1%)
Frame = -3
Query: 368 EARHVAREALGCAGTVPAPKVAAVAREGDKQAA*TGWGSLMPD-GTIRTRPRMERSGGRA 192
EA V R+ L A T AP VAA+ T W L P T PR R R
Sbjct: 34 EACGVCRDRLSAAVTAEAPAVAALVG--------TVWSGLEPQLAATATMPRQRRWSARL 85
Query: 191 RTWRTLTHIP 162
W T T +P
Sbjct: 86 SRWMTPTMMP 95
>ref|NP_519316.1| HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
gi|17428209|emb|CAD14897.1| HYPOTHETICAL PROTEIN
[Ralstonia solanacearum]
Length = 501
Score = 33.1 bits (74), Expect = 2.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 319 GTVPAQPNASLATWRASLLPLPSPLMLPRKLVCP 420
G V A+P SL +R L P P PL+ PR++ P
Sbjct: 7 GGVSARPGTSLEFYRLPLSPSPMPLLFPRQIARP 40
>ref|NP_860464.1| valyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
gi|32262482|gb|AAP77530.1| valyl-tRNA synthetase
[Helicobacter hepaticus ATCC 51449]
Length = 899
Score = 32.7 bits (73), Expect = 3.2
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 317 RAQSPHNPMPLSQHGVLHYYPCQVRSCFLESLSALRCRCVR*EIWLPYTHTPMPCHCNDK 496
+ ++ HN + +G LH+YP Q + + + L+ C+ ++W + C C +K
Sbjct: 375 KKETAHNAIQRVNNGELHFYPAQWLNNYNAWMRELKDWCISRQLWWGHRIPVWYCECGNK 434
>ref|NP_631754.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|12311708|emb|CAC22724.1| conserved hypothetical
protein [Streptomyces coelicolor A3(2)]
Length = 151
Score = 32.7 bits (73), Expect = 3.2
Identities = 20/63 (31%), Positives = 30/63 (46%), Gaps = 9/63 (14%)
Frame = -2
Query: 540 ARVPCVCIPWARGILLSLQWH---GMGVCVYGSHISYL--THRHLRADKLS----RKHER 388
AR+ +PW L L WH G G+ ++G + YL + KL+ R+H+R
Sbjct: 87 ARIAMKLVPWGDATLFVLDWHALRGPGIRMHGLPVDYLVEVRNGMMLTKLARIAVREHDR 146
Query: 387 TWQ 379
T Q
Sbjct: 147 TLQ 149
>ref|NP_079162.1| hypothetical protein FLJ14280 [Homo sapiens]
gi|10436705|dbj|BAB14892.1| unnamed protein product
[Homo sapiens]
Length = 257
Score = 32.7 bits (73), Expect = 3.2
Identities = 33/122 (27%), Positives = 40/122 (32%), Gaps = 12/122 (9%)
Frame = +3
Query: 84 PHGNPQHVFTMSRKTYFSGPTKRKPGGNVGECAPSPRPAAATLHSRTSPDCAVRHKTAPP 263
PHGN R P R+PGG P+PRP A S DC R P
Sbjct: 100 PHGNTTASTAPPRH-----PRPRRPGGPA--LRPTPRPCAGPAPPPASRDCRCRRPRRWP 152
Query: 264 RL------------SCLLVAFSGHSRNLGSGHSPRTTQCLSRNMACFTTTLAKSAHAS*K 407
R SC A+S L S + C +R T A + A+
Sbjct: 153 RAGRRGRRAGACKPSCAGAAWSARGAPLCSYRTSCAGSCGARTAPTPAPTCASPSAAASS 212
Query: 408 AC 413
C
Sbjct: 213 CC 214