Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000604A_C01 KCC000604A_c01
(499 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_151291.1| hypothetical protein XP_151291 [Mus musculus] 45 6e-04
gb|AAC38258.1| zinc-protease transporter [Pseudomonas fluorescens] 39 0.046
ref|NP_823727.1| putative translation initiation factor IF-2 [St... 38 0.060
pir||A57145 regulatory protein prrC - Rhodobacter sphaeroides gi... 38 0.060
ref|ZP_00006500.1| COG1999: Uncharacterized protein SCO1/SenC/Pr... 38 0.060
>ref|XP_151291.1| hypothetical protein XP_151291 [Mus musculus]
Length = 329
Score = 44.7 bits (104), Expect = 6e-04
Identities = 29/70 (41%), Positives = 33/70 (46%), Gaps = 2/70 (2%)
Frame = -1
Query: 499 RRQLPPSAPTASGRSR*NAAPRPGWRHD--PRTRPGIVTARAAEGLARATAPGAPSAPRR 326
RR PPSAPTA+ R + PRP H P R AR+ E R+ PG S R
Sbjct: 106 RRPQPPSAPTATSRRHRSPEPRPRRPHSPLPAARNPQRGARSPERTTRSAEPGTHSPQHR 165
Query: 325 RARATAAAPS 296
A AAPS
Sbjct: 166 ARNAQPAAPS 175
>gb|AAC38258.1| zinc-protease transporter [Pseudomonas fluorescens]
Length = 471
Score = 38.5 bits (88), Expect = 0.046
Identities = 42/138 (30%), Positives = 53/138 (37%), Gaps = 33/138 (23%)
Frame = -1
Query: 481 SAPTASGRSR*NAA-------------PRPG--WRHDPRTRPGIVTARAAE--------- 374
+APTAS S +A+ PRP W ++R G +R A
Sbjct: 155 NAPTASSSSSTSASSSAATAPAPTPWRPRPASTWPRPRKSRRGTARSRPARTGAAGRGAA 214
Query: 373 -----GLARATAPGAPSAPRRRA--RATAAAPSGEYIYLCHRAPSTGSYSLTR--PRRCR 221
G AR T PGAP+ PR R A A + E L H A Y + + P CR
Sbjct: 215 GDRRPGAARRTLPGAPAEPRSYTAWRDLALAENPELASLRH-AVDVARYEVEQNAPTSCR 273
Query: 220 CWQV*ATKPPRSGGDIRR 167
W T P S +RR
Sbjct: 274 AWA--CTPAPASPSPVRR 289
>ref|NP_823727.1| putative translation initiation factor IF-2 [Streptomyces
avermitilis MA-4680] gi|29606199|dbj|BAC70262.1|
putative translation initiation factor IF-2
[Streptomyces avermitilis MA-4680]
Length = 1046
Score = 38.1 bits (87), Expect = 0.060
Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = -1
Query: 487 PPSAPTASGRSR*NAAPRPGWRHDPRTRPGIVTARAAEGLARATAPGAPSA----PRRRA 320
P +AP A G PRPG + PR P A E A +AP AP+A PR A
Sbjct: 101 PAAAPAAPG-------PRPGPKPAPRPAPAAPAPAAPEFTAPPSAPAAPAAAASGPRPGA 153
Query: 319 RATAAAPSG 293
R A P G
Sbjct: 154 RPGAPKPGG 162
>pir||A57145 regulatory protein prrC - Rhodobacter sphaeroides
gi|733128|gb|AAA86722.1| membrane-anchored regulatory
protein
Length = 231
Score = 38.1 bits (87), Expect = 0.060
Identities = 29/102 (28%), Positives = 45/102 (43%), Gaps = 4/102 (3%)
Frame = +1
Query: 145 TPELVRRIAECLHPNEVASSLKLANSDTAAALSDYRTLYLAHDGKDIYIRLKAQQ----P 312
TPE ++ AE +HP+ +A L + AA Y+T Y + D Y +
Sbjct: 117 TPEQLKFFAEAIHPDTIA--LTGTEAQVKAASQAYKTFYRVQESDDDYYLIDHSTFTYFM 174
Query: 313 WPGHAFVAHWGRPEPWRELSLRQRERLLCLAASSGHAASLDA 438
PG FV + R + +++ ER+ C A S + S DA
Sbjct: 175 LPGTGFVDFFKREDTPEQIA----ERISCFANDSHVSTSFDA 212
>ref|ZP_00006500.1| COG1999: Uncharacterized protein SCO1/SenC/PrrC, involved in
biogenesis of respiratory and photosynthetic systems
[Rhodobacter sphaeroides]
Length = 246
Score = 38.1 bits (87), Expect = 0.060
Identities = 29/102 (28%), Positives = 45/102 (43%), Gaps = 4/102 (3%)
Frame = +1
Query: 145 TPELVRRIAECLHPNEVASSLKLANSDTAAALSDYRTLYLAHDGKDIYIRLKAQQ----P 312
TPE ++ AE +HP+ +A L + AA Y+T Y + D Y +
Sbjct: 132 TPEQLKFFAEAIHPDTIA--LTGTEAQVKAASQAYKTFYRVQESDDDYYLIDHSTFTYFM 189
Query: 313 WPGHAFVAHWGRPEPWRELSLRQRERLLCLAASSGHAASLDA 438
PG FV + R + +++ ER+ C A S + S DA
Sbjct: 190 LPGTGFVDFFKREDTPEQIA----ERISCFANDSHVSTSFDA 227
