KCC000601A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000601A_C01 KCC000601A_c01
cgagctggccttacattatgccgcgatgttcTGCTAAATATACATACCTTCTGTGAGCTT
GTTACCAGAGCCTTTGCGACGAACCCAACAGCTCCAGTCTTACCTTGTTCATACATAAGT
ACAAGGCACTAAAACAAGAATAGAGAGCAAGTGACAGGCCGGCCGCGCAAATGGCGGAGG
TGAAAAAGAAGATTAAGCCAGGCGCTATCGAGGCGCACGCAGAGGAGCTCGCAATTGTTG
TGCACTATGAGGTCCAGGAGGTTAGCACGCAGTCAGATGGGAGTCAAAAAGTAATCAGCA
AGGAGCCTGGCGAGAAGAAGATCTCTGTCAAATCCCTGTCAGAGAAGACAAATGTTCCGC
TCTTAGCAACGGAAATCATCGAGAAGTGCAAGCTCATTCACCCATCGAAGGCGGGGCAAG
TGGAGGAGCTGCTTTACCAGTTGCAGAGCCGGGGTGGCGGTGGCGGAGCCGATGCAAAGG
CAAAGCCCGCAGCCAAGCCTGCTGCGGCGTCTCCAGCGAAGTCAGCGGCAGCAGCTCCGC
CCCCGCCGTCGAATGTGGCGCAGTCGCCACAAAAGCCGGGGCAGCCGCCCAGCACCCCCT
CCAAAAAGCCACCGGCGGCAGCTGGGGCGCCTGCTCCCATGCTGAACGGGAAGCCGGCGC
CGAAGGCGCAGAGCCGGTT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000601A_C01 KCC000601A_c01
         (679 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_055785.2| kinesin-associated protein 3; smg GDS-associate...    87  2e-16
sp|Q92845|KFP3_HUMAN Kinesin-associated protein 3 (Smg GDS-assoc...    85  9e-16
ref|XP_213920.2| similar to KAP3A [Rattus norvegicus]                  84  2e-15
ref|NP_034759.1| kinesin-associated protein 3; Smg GDS [Mus musc...    83  3e-15
sp|P70188|KFP3_MOUSE Kinesin-associated protein 3 (KAP3) gi|7428...    83  3e-15

>ref|NP_055785.2| kinesin-associated protein 3; smg GDS-associated protein; small G
           protein GDP dissociation stimulator [Homo sapiens]
           gi|20380973|gb|AAH28679.1| Kinesin-associated protein 3
           [Homo sapiens]
          Length = 792

 Score = 87.0 bits (214), Expect = 2e-16
 Identities = 43/112 (38%), Positives = 68/112 (60%)
 Frame = +3

Query: 180 VKKKIKPGAIEAHAEELAIVVHYEVQEVSTQSDGSQKVISKEPGEKKISVKSLSEKTNVP 359
           +K+K+K G I+ H  E A++VHYEV+       G   +  ++  +K I +KSL+  T++ 
Sbjct: 9   LKRKVKGGNIDVHPSEKALIVHYEVEATILGEMGDPMLGERKECQKIIRLKSLNANTDIT 68

Query: 360 LLATEIIEKCKLIHPSKAGQVEELLYQLQSRGGGGGADAKAKPAAKPAAASP 515
            LA +++E+CKLIHPSK  +VE+LLY LQ+R        K + ++KP    P
Sbjct: 69  SLARKVVEECKLIHPSKLNEVEQLLYYLQNRRDSLSGKEKKEKSSKPKDPPP 120

>sp|Q92845|KFP3_HUMAN Kinesin-associated protein 3 (Smg GDS-associated protein)
           gi|3645904|gb|AAC50788.1| SMAP
          Length = 792

 Score = 85.1 bits (209), Expect = 9e-16
 Identities = 43/112 (38%), Positives = 67/112 (59%)
 Frame = +3

Query: 180 VKKKIKPGAIEAHAEELAIVVHYEVQEVSTQSDGSQKVISKEPGEKKISVKSLSEKTNVP 359
           +K+K+K G I+ H  E A++VHYEV+       G   +  ++  +K I +KSL+  T++ 
Sbjct: 9   LKRKVKGGNIDVHPSEKALIVHYEVEATILGEMGDPMLGERKECQKIIRLKSLNANTDIT 68

Query: 360 LLATEIIEKCKLIHPSKAGQVEELLYQLQSRGGGGGADAKAKPAAKPAAASP 515
            LA +++E+CKLIHPSK  +VE LLY LQ+R        K + ++KP    P
Sbjct: 69  SLARKVVEECKLIHPSKLNEVELLLYYLQNRRDSLSGKEKKEKSSKPKDPPP 120

>ref|XP_213920.2| similar to KAP3A [Rattus norvegicus]
          Length = 860

 Score = 84.0 bits (206), Expect = 2e-15
 Identities = 42/112 (37%), Positives = 67/112 (59%)
 Frame = +3

Query: 180 VKKKIKPGAIEAHAEELAIVVHYEVQEVSTQSDGSQKVISKEPGEKKISVKSLSEKTNVP 359
           +K+K+K G I+ H  E A++V YEV+       G   +  ++  +K I +KSL+  T++ 
Sbjct: 9   LKRKVKGGNIDVHPSEKALIVQYEVEATILGEMGDPMLGERKECQKIIRLKSLNANTDIT 68

Query: 360 LLATEIIEKCKLIHPSKAGQVEELLYQLQSRGGGGGADAKAKPAAKPAAASP 515
            LA +++E+CKLIHPSK  +VE+LLY LQ+R        K + ++KP    P
Sbjct: 69  SLARKVVEECKLIHPSKLNEVEQLLYYLQNRRDSLSGKEKKEKSSKPKDPPP 120

>ref|NP_034759.1| kinesin-associated protein 3; Smg GDS [Mus musculus]
           gi|1526421|dbj|BAA08902.1| KAP3B [Mus musculus]
           gi|25955676|gb|AAH40362.1| Kinesin-associated protein 3
           [Mus musculus]
          Length = 772

 Score = 83.2 bits (204), Expect = 3e-15
 Identities = 42/112 (37%), Positives = 67/112 (59%)
 Frame = +3

Query: 180 VKKKIKPGAIEAHAEELAIVVHYEVQEVSTQSDGSQKVISKEPGEKKISVKSLSEKTNVP 359
           +K+K+K G I+ H  E A++V YEV+       G   +  ++  +K I +KSL+  T++ 
Sbjct: 9   LKRKVKGGNIDVHPSEKALIVQYEVEATILGEMGDPMLGERKECQKIIRLKSLNANTDIT 68

Query: 360 LLATEIIEKCKLIHPSKAGQVEELLYQLQSRGGGGGADAKAKPAAKPAAASP 515
            LA +++E+CKLIHPSK  +VE+LLY LQ+R        K + ++KP    P
Sbjct: 69  SLARKVVEECKLIHPSKLSEVEQLLYYLQNRRDSLPGKEKKEKSSKPKDPPP 120

>sp|P70188|KFP3_MOUSE Kinesin-associated protein 3 (KAP3) gi|7428719|pir||JC6161
           kinesin-associated protein KAP3 splice form A - mouse
           gi|1526419|dbj|BAA08901.1| KAP3A [Mus musculus]
           gi|29145067|gb|AAH49100.1| Kifap3 protein [Mus musculus]
          Length = 793

 Score = 83.2 bits (204), Expect = 3e-15
 Identities = 42/112 (37%), Positives = 67/112 (59%)
 Frame = +3

Query: 180 VKKKIKPGAIEAHAEELAIVVHYEVQEVSTQSDGSQKVISKEPGEKKISVKSLSEKTNVP 359
           +K+K+K G I+ H  E A++V YEV+       G   +  ++  +K I +KSL+  T++ 
Sbjct: 9   LKRKVKGGNIDVHPSEKALIVQYEVEATILGEMGDPMLGERKECQKIIRLKSLNANTDIT 68

Query: 360 LLATEIIEKCKLIHPSKAGQVEELLYQLQSRGGGGGADAKAKPAAKPAAASP 515
            LA +++E+CKLIHPSK  +VE+LLY LQ+R        K + ++KP    P
Sbjct: 69  SLARKVVEECKLIHPSKLSEVEQLLYYLQNRRDSLPGKEKKEKSSKPKDPPP 120



EST assemble image


clone accession position
1 CL46f09_r AV395660 1 506
2 MXL078d07_r BP097606 30 448
3 CL70g01_r AV396858 34 569
4 MXL097e11_r BP098697 60 489
5 HCL072e11_r AV643603 163 679
6 MXL032g12_r BP094937 194 563




Chlamydomonas reinhardtii
Kazusa DNA Research Institute