Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000600A_C01 KCC000600A_c01
(629 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_134031.1| RIKEN cDNA 5830468F06 [Mus musculus] 32 0.073
dbj|BAB31048.1| unnamed protein product [Mus musculus] 32 0.073
ref|XP_287566.1| hypothetical protein XP_287566 [Mus musculus] 29 0.088
dbj|BAC04935.1| unnamed protein product [Homo sapiens] 28 0.34
ref|NP_062289.1| nuclear localization signals binding protein 1 ... 28 2.1
>ref|XP_134031.1| RIKEN cDNA 5830468F06 [Mus musculus]
Length = 207
Score = 32.3 bits (72), Expect(2) = 0.073
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 59 ALQGSTRHDSVEGGYMAHTHTHTHT 133
A + R V G Y HTHTHTHT
Sbjct: 22 AASRNAREHRVSGAYTRHTHTHTHT 46
Score = 25.4 bits (54), Expect(2) = 0.073
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 108 HTHTHTHTRRNSMSSTTTSGRE 173
HTHTHTHT + + S E
Sbjct: 43 HTHTHTHTHTRACTHDEPSPTE 64
>dbj|BAB31048.1| unnamed protein product [Mus musculus]
Length = 207
Score = 32.3 bits (72), Expect(2) = 0.073
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 59 ALQGSTRHDSVEGGYMAHTHTHTHT 133
A + R V G Y HTHTHTHT
Sbjct: 22 AASRNAREHRVSGAYTRHTHTHTHT 46
Score = 25.4 bits (54), Expect(2) = 0.073
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 108 HTHTHTHTRRNSMSSTTTSGRE 173
HTHTHTHT + + S E
Sbjct: 43 HTHTHTHTHTRACTHDEPSPTE 64
>ref|XP_287566.1| hypothetical protein XP_287566 [Mus musculus]
Length = 115
Score = 29.3 bits (64), Expect(2) = 0.088
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 108 HTHTHTHTRRNSMSSTTTSG 167
HTHTHTHT ++ + T T G
Sbjct: 94 HTHTHTHTHTHTHTHTHTCG 113
Score = 28.5 bits (62), Expect(2) = 0.088
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 65 QGSTRHDSVEGGYMAHTHTHTHT 133
QG D + G HTHTHTHT
Sbjct: 47 QGEREKDYLLGISTTHTHTHTHT 69
Score = 27.7 bits (60), Expect(2) = 3.2
Identities = 11/24 (45%), Positives = 14/24 (57%)
Frame = +3
Query: 108 HTHTHTHTRRNSMSSTTTSGRESG 179
HTHTHTHT ++ + T T G
Sbjct: 90 HTHTHTHTHTHTHTHTHTHTHTCG 113
Score = 24.6 bits (52), Expect(2) = 3.2
Identities = 10/21 (47%), Positives = 11/21 (51%)
Frame = +2
Query: 71 STRHDSVEGGYMAHTHTHTHT 133
ST H HT+THTHT
Sbjct: 59 STTHTHTHTHTHTHTYTHTHT 79
>dbj|BAC04935.1| unnamed protein product [Homo sapiens]
Length = 185
Score = 28.1 bits (61), Expect(2) = 0.34
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 109 THTHTHTHDAIQ*ARLRPAGGNLGSRRAG*TLFSAPRVR 225
THTHTHTH + R +P L ++A ++ +V+
Sbjct: 109 THTHTHTHREREREREKPGPWELWLQKAKLLIYQRSKVK 147
Score = 27.3 bits (59), Expect(2) = 0.34
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +3
Query: 69 EAQGTTPSRVDTWHTHTHTHTRR 137
E Q T S T HTHTHTHT R
Sbjct: 96 ERQNKTLSLKHT-HTHTHTHTHR 117
>ref|NP_062289.1| nuclear localization signals binding protein 1 [Mus musculus]
gi|8493519|gb|AAB35286.2| nuclear localization signal
binding protein [Mus musculus]
Length = 143
Score = 27.7 bits (60), Expect(2) = 2.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 108 HTHTHTHTRRNSMSSTTTSGRESG 179
HTHTHTHT ++ +S + ++G
Sbjct: 77 HTHTHTHTHTHTPTSLLPARSQAG 100
Score = 25.0 bits (53), Expect(2) = 2.1
Identities = 10/23 (43%), Positives = 12/23 (51%)
Frame = +2
Query: 65 QGSTRHDSVEGGYMAHTHTHTHT 133
+G H + HTHTHTHT
Sbjct: 52 EGLCMHICIHIHTHTHTHTHTHT 74
