KCC000599A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000599A_C01 KCC000599A_c01
CAAAATTTCTAGCGACCTTTGACGCCCGACTCCGAGACTCCTTTGCAATCGCGGCGATGC
TGCTCCTTCGCGCGCACAACGTGCGGACGGCGCCGCTGCGAAGCCTAAATGGCGAACGTT
TTGTTTATGGACTCCCAGGCCGTGTGGTGTTCCTGCGGCGGAACGCCTCGGTCTCCAAAC
CCGATTCTGCCGAGACCCAGGGCAAGAACGACAAGGAAAGTCATTCAACGGATGGTCATG
GCAGCCACGAGCACGCTCACGCACAAGGCGGTGACCACTGTAGCCACGGTCTTGGTCACA
CGCATGCTGAATCGCATCAGCATTCCGGCTCAGAGCACGGGCACGGCCATGGCCACGGCG
AGCATCACGGCGGTGTCGAGGGTGCGGTGCACCAGGTGCAGCACCGCGCGGCCGAGAAGT
CAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000599A_C01 KCC000599A_c01
         (424 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_327548.1| hypothetical protein [Neurospora crassa] gi|289...    58  3e-08
sp|P01044|KNH1_BOVIN Kininogen, HMW I precursor (Thiol proteinas...    57  5e-08
ref|NP_741698.1| putative protein (80.3 kD) (5T676) [Caenorhabdi...    57  8e-08
gb|AAH55611.1| Unknown (protein for MGC:66347) [Danio rerio]           56  1e-07
ref|NP_419122.1| cation efflux family protein [Caulobacter cresc...    55  2e-07

>ref|XP_327548.1| hypothetical protein [Neurospora crassa] gi|28923712|gb|EAA32880.1|
           hypothetical protein [Neurospora crassa]
          Length = 604

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 34/94 (36%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
 Frame = +3

Query: 111 GERFVYGLPGRVVFLRRNASVSKPDSAETQGKNDKESHSTDGHG-SHEHAHAQGGDHCSH 287
           GE FV    G +V L   A+          G       S  G G SH H+H+   D  +H
Sbjct: 332 GELFVVSTMGLLVNLVGMAAFGHHHHGHDHGHGHSHGSSCGGSGHSHSHSHSHS-DSDAH 390

Query: 288 GLGHTHAESHQHS-----GSEHGHGHGHGEHHGG 374
           G  H+H  SH HS       +H HGH HG  HGG
Sbjct: 391 GHSHSHGHSHSHSHDHKHDHKHDHGHSHGHSHGG 424

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 26/60 (43%), Positives = 30/60 (49%), Gaps = 3/60 (5%)
 Frame = +3

Query: 234 GHGSHEHAHAQGGDHCSH--GLGHTHAESHQHSGSE-HGHGHGHGEHHGGVEGAVHQVQH 404
           GH  H H H  G  H S   G GH+H+ SH HS S+ HGH H HG  H       H  +H
Sbjct: 353 GHHHHGHDHGHGHSHGSSCGGSGHSHSHSHSHSDSDAHGHSHSHGHSHSHSHDHKHDHKH 412

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 27/72 (37%), Positives = 32/72 (43%), Gaps = 6/72 (8%)
 Frame = +3

Query: 174 SKPDSAETQGKNDKESHS---TDGHG---SHEHAHAQGGDHCSHGLGHTHAESHQHSGSE 335
           S   S    G +   SHS   +D HG   SH H+H+   DH  H   H H  SH HS   
Sbjct: 366 SHGSSCGGSGHSHSHSHSHSDSDAHGHSHSHGHSHSHSHDH-KHDHKHDHGHSHGHSHGG 424

Query: 336 HGHGHGHGEHHG 371
           H H H +   HG
Sbjct: 425 HSHSHDNENMHG 436

 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 18/37 (48%), Positives = 20/37 (53%)
 Frame = +3

Query: 246 HEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGH 356
           H  +H  G DHC H   H+H  SH HS   HGH H H
Sbjct: 22  HLRSHGHGHDHCDHSHSHSHGHSHDHS---HGHAHSH 55

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = +3

Query: 174 SKPDSAETQGKNDKESHSTDGHGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHG 353
           S+  S  T   + K++ S D + S+ H H    DH  H   H+H  SH H   +H H H 
Sbjct: 71  SRRGSYATGAHSHKKTQSNDYNYSYTHNHNHNHDH-EHDHDHSHDHSHDHD-HDHDHAHD 128

Query: 354 HGEHHG-GVEGAVH 392
           H  +H  G  G  H
Sbjct: 129 HAHNHSPGAGGTGH 142

 Score = 37.4 bits (85), Expect = 0.049
 Identities = 23/71 (32%), Positives = 27/71 (37%), Gaps = 4/71 (5%)
 Frame = +3

Query: 156 RRNASVSKPDSAETQGKNDKESHSTDGHG---SHEHAHAQGGDHC-SHGLGHTHAESHQH 323
           RR +  +   S +    ND     T  H     HEH H    DH   H   H HA  H H
Sbjct: 72  RRGSYATGAHSHKKTQSNDYNYSYTHNHNHNHDHEHDHDHSHDHSHDHDHDHDHAHDHAH 131

Query: 324 SGSEHGHGHGH 356
           + S    G GH
Sbjct: 132 NHSPGAGGTGH 142

 Score = 37.0 bits (84), Expect = 0.064
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = +3

Query: 306 AESHQHSGSEHGHGHGHGEHHGGVEGAVHQVQH 404
           A  H H G +HGHGH HG   GG  G  H   H
Sbjct: 351 AFGHHHHGHDHGHGHSHGSSCGG-SGHSHSHSH 382

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 16/55 (29%), Positives = 22/55 (39%)
 Frame = +3

Query: 240 GSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGEHHGGVEGAVHQVQH 404
           G+H H   Q  D+ ++   H H  +H H   +H H H H   H       H   H
Sbjct: 79  GAHSHKKTQSNDY-NYSYTHNHNHNHDHE-HDHDHSHDHSHDHDHDHDHAHDHAH 131

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = +3

Query: 249 EHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGEHHGGVEGAVH 392
           +H H       SHG GH H +        H H H HG  H    G  H
Sbjct: 14  QHHHLASDHLRSHGHGHDHCD--------HSHSHSHGHSHDHSHGHAH 53

>sp|P01044|KNH1_BOVIN Kininogen, HMW I precursor (Thiol proteinase inhibitor) [Contains:
           Bradykinin] gi|68787|pir||KGBOH1 kininogen, HMW I
           precursor - bovine gi|492|emb|CAA24735.1| prekininogen
           [Bos taurus] gi|223781|prf||0911275A kininogen I,high MW
          Length = 621

 Score = 57.4 bits (137), Expect = 5e-08
 Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 20/88 (22%)
 Frame = +3

Query: 162 NASVSKPDSA-----ETQGKNDKESHSTDGHG--------------SHEHAHAQG-GDHC 281
           + +VS P SA     + +  + KE   T GHG               H+H H QG G H 
Sbjct: 398 STTVSLPHSAMSPVQDEERDSGKEQGPTHGHGWDHGKQIKLHGLGLGHKHKHDQGHGHHG 457

Query: 282 SHGLGHTHAESHQHSGSEHGHGHGHGEH 365
           SHGLGH H + H   G  H HGHGHG+H
Sbjct: 458 SHGLGHGHQKQHG-LGHGHKHGHGHGKH 484

>ref|NP_741698.1| putative protein (80.3 kD) (5T676) [Caenorhabditis elegans]
           gi|11359776|pir||T45059 hypothetical protein Y39B6B.gg
           [imported] - Caenorhabditis elegans
           gi|15209353|emb|CAC51077.1| Hypothetical protein
           Y39B6A.1 [Caenorhabditis elegans]
          Length = 735

 Score = 56.6 bits (135), Expect = 8e-08
 Identities = 25/56 (44%), Positives = 28/56 (49%)
 Frame = +3

Query: 237 HGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGEHHGGVEGAVHQVQH 404
           HG H HA A  G H  HG  H H   H H+ + HGH   HG HHG   G+ H   H
Sbjct: 506 HGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGH-HGSHHSPAH 560

 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 29/66 (43%), Positives = 32/66 (47%), Gaps = 8/66 (12%)
 Frame = +3

Query: 237 HGSHEHA---HAQGGDHCSHGLGHTHAESH---QHSGSEHGHGHGHGEHHG--GVEGAVH 392
           HG H HA   H   G H SHG+ H H ESH    H+ + HGH   HG HHG  G     H
Sbjct: 564 HGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAH 623

Query: 393 QVQHRA 410
              H A
Sbjct: 624 HGHHGA 629

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 26/60 (43%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +3

Query: 237 HGSHEHAHAQGGD--HCSHGLGHTHAESHQHSGSEHGHGHGHGEHHGGVEGAVHQVQHRA 410
           H  H   H   GD  H SHG+ H H  +H HS + HGH  GHG HHG      H   H A
Sbjct: 633 HAPHHEHHEHHGDHHHGSHGVHHGHHGTH-HSLAHHGHHGGHGTHHGAHHSPAHHGHHGA 691

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 27/60 (45%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +3

Query: 237 HGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEH----GHGHGHGEHHGGVEGAVHQVQH 404
           HG H HA A  G H SHG GH     H H G  H     HGH HGEHH       H  +H
Sbjct: 429 HGEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGH-HGEHHHAPAHHGHHGEH 487

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 26/56 (46%), Positives = 28/56 (49%)
 Frame = +3

Query: 237 HGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGEHHGGVEGAVHQVQH 404
           HG H HA A  G H  HG  H H  SH HS + HGH   HGEHH       H  +H
Sbjct: 471 HGEHHHAPAHHGHHGEHGTHHGHHGSH-HSPAHHGH---HGEHHHAPAHHGHHGEH 522

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 26/56 (46%), Positives = 27/56 (47%)
 Frame = +3

Query: 237 HGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGEHHGGVEGAVHQVQH 404
           HG H HA A  G H  HG  H H  SH HS + HGH   HGEHH       H   H
Sbjct: 529 HGEHHHAPAHHGHHGEHGTHHGHHGSH-HSPAHHGH---HGEHHHAPAHHGHHGHH 580

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 26/81 (32%), Positives = 35/81 (43%)
 Frame = +3

Query: 162 NASVSKPDSAETQGKNDKESHSTDGHGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHG 341
           ++S S   S+ +    D++ H+   H  HEH      +H   G  H HA  H   G  H 
Sbjct: 346 SSSSSSSSSSSSSESEDEKKHAPAHHEHHEHKDGAHHEH-KEGEHHEHAAHHDEHGVHHR 404

Query: 342 HGHGHGEHHGGVEGAVHQVQH 404
           H   HGEHHG      H  +H
Sbjct: 405 H---HGEHHGTHHSPAHHGEH 422

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 29/76 (38%), Positives = 35/76 (45%), Gaps = 8/76 (10%)
 Frame = +3

Query: 201 GKNDKESHSTDGHGSHEHAHAQG---GDHCSHGLGHTHAESHQHSGSEHG-----HGHGH 356
           G + +  H+   HG H H  + G   G H SHG GH HA +H     EHG     HG G+
Sbjct: 562 GHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGH-HAPAHHGHHGEHGVHHGHHGAGY 620

Query: 357 GEHHGGVEGAVHQVQH 404
           G HHG      H   H
Sbjct: 621 GAHHGHHGAHHHHAPH 636

 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 27/68 (39%), Positives = 30/68 (43%), Gaps = 7/68 (10%)
 Frame = +3

Query: 222 HSTDGHGSHEHAHAQGGDHCSHGLGHTH-----AESHQHSGSEHGHG--HGHGEHHGGVE 380
           H + GHG H  AH   G H  HG+ H H        H H G+ H H   H H EHHG   
Sbjct: 590 HESHGHGHHAPAHH--GHHGEHGVHHGHHGAGYGAHHGHHGAHHHHAPHHEHHEHHGDHH 647

Query: 381 GAVHQVQH 404
              H V H
Sbjct: 648 HGSHGVHH 655

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 222 HSTDGHGSHEHA-HAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGEHHGGVEGAVHQV 398
           H + GHG H  A H   G+H      H H   H H+ + HGH   HG HHG   G+ H  
Sbjct: 442 HESHGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGH-HGSHHSP 500

Query: 399 QH 404
            H
Sbjct: 501 AH 502

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = +3

Query: 237 HGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGE-HHGGVEGAVHQVQHRA 410
           HG H   H     H  HG  H H   H H+ + HGH   HG  HH       H   H A
Sbjct: 406 HGEHHGTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHHHA 464

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 25/64 (39%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
 Frame = +3

Query: 222 HSTDGHGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHG-HGEHHGGVEGAVHQV 398
           HS   HG H   H     H  HG  H HA +H     EHG  HG HG HH       H  
Sbjct: 450 HSPAHHGHHGEHHHAPAHHGHHG-EHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGE 508

Query: 399 QHRA 410
            H A
Sbjct: 509 HHHA 512

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
 Frame = +3

Query: 216 ESHSTDGHGSH---------EHAHAQGGDHCSHGLGHTHAES---HQHSGSEHGHGHGHG 359
           E H    HGSH          H+ A  G H  HG  H    S   H H G+ H HG  HG
Sbjct: 641 EHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHG 700

Query: 360 EHHG 371
            HHG
Sbjct: 701 AHHG 704

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
 Frame = +3

Query: 201 GKNDKESHSTDGHGSHEHAHAQGGDH----CSHGLGHTHAESHQHSGSEHGHGHGHGEHH 368
           G++    HS   HG H   H   G+H      HG   +H   H HS + HGH   HGEHH
Sbjct: 407 GEHHGTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGH-HSPAHHGH---HGEHH 462

Query: 369 GGVEGAVHQVQHRAA 413
                  H  +H  A
Sbjct: 463 HAPAHHGHHGEHHHA 477

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 25/72 (34%), Positives = 31/72 (42%), Gaps = 15/72 (20%)
 Frame = +3

Query: 201 GKNDKESHSTDGHGSH-EHAHA---------QGGDHCSHGLGHT-----HAESHQHSGSE 335
           G + +  H+   HG H EH HA          G  H  HG  H+     H   H H+ + 
Sbjct: 456 GHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAH 515

Query: 336 HGHGHGHGEHHG 371
           HGH   HG HHG
Sbjct: 516 HGHHGEHGTHHG 527

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
 Frame = +3

Query: 234 GHGSHEHAHAQGGDHCSHGLGHTHAESH-----QHSGSEHGHGHGHGEHH 368
           GHG+H  AH     H  HG  H H   H      H   E+ H HGH   H
Sbjct: 672 GHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKH 721

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 25/57 (43%), Positives = 26/57 (44%), Gaps = 1/57 (1%)
 Frame = +3

Query: 237 HGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGEHHG-GVEGAVHQVQH 404
           HGSH H+ A  G H  H     H   H H GS HG  HGH E HG G     H   H
Sbjct: 552 HGSH-HSPAHHGHHGEHHHAPAHHGHHGHHGS-HGVHHGHHESHGHGHHAPAHHGHH 606

 Score = 37.0 bits (84), Expect = 0.064
 Identities = 25/87 (28%), Positives = 34/87 (38%), Gaps = 4/87 (4%)
 Frame = +3

Query: 156 RRNASVSKPDSAETQGKNDKESHSTDGHGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSE 335
           ++ AS S   S+ +   +   S  ++    H  AH +  +H   G  H H E   H   E
Sbjct: 336 KKAASSSSSSSSSSSSSSSSSSSESEDEKKHAPAHHEHHEH-KDGAHHEHKEGEHH---E 391

Query: 336 HG-HGHGHG---EHHGGVEGAVHQVQH 404
           H  H   HG    HHG   G  H   H
Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAH 418

 Score = 37.0 bits (84), Expect = 0.064
 Identities = 24/86 (27%), Positives = 32/86 (36%), Gaps = 1/86 (1%)
 Frame = +3

Query: 162 NASVSKPDSAETQGKNDKESHSTDGHGSHEHAHA-QGGDHCSHGLGHTHAESHQHSGSEH 338
           ++S S   S     K  K+ H    HG   H  A       S     + + S   S  E 
Sbjct: 305 SSSSSSSSSESEDEKKKKKVHHKKSHGKKHHKKAASSSSSSSSSSSSSSSSSSSESEDEK 364

Query: 339 GHGHGHGEHHGGVEGAVHQVQHRAAE 416
            H   H EHH   +GA H  +H+  E
Sbjct: 365 KHAPAHHEHHEHKDGAHH--EHKEGE 388

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = +3

Query: 201 GKNDKESHSTDGHGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGE 362
           G +    HS   HG H   H  G  H +H   H   E+H H    HGH   H +
Sbjct: 674 GTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHH----HGHHSKHSK 723

>gb|AAH55611.1| Unknown (protein for MGC:66347) [Danio rerio]
          Length = 599

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 29/70 (41%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
 Frame = +3

Query: 201 GKNDKESHSTDGHGSHEHAHAQGG-DHCSHGLGHT----HAESHQHSGSEH-GHGHGHGE 362
           G +D   H   GH    H H  GG DH  HG GH     +   H H G +H GHGHGHG 
Sbjct: 414 GGHDGHGHGHGGHDHDGHGHGHGGHDHYGHGHGHGGHDHYGHGHGHGGHDHYGHGHGHGG 473

Query: 363 HHGGVEGAVH 392
           H     G  H
Sbjct: 474 HDHDGHGHGH 483

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 36/100 (36%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
 Frame = +3

Query: 93  PLRSLNGERFVYGLPGRVVFLRRNASVSKPDSAETQGKNDKESHSTDGHGSHEH---AHA 263
           P+  +N   F    P     L  +AS          G +D + H   GHG H+H    H 
Sbjct: 388 PVAYMNYGPFTSYAPTYDSSLLISASGGHDGHGHGHGGHDHDGHG-HGHGGHDHYGHGHG 446

Query: 264 QGG-DHCSHGLGH----THAESHQHSGSEH-GHGHGHGEH 365
            GG DH  HG GH     +   H H G +H GHGHGHG H
Sbjct: 447 HGGHDHYGHGHGHGGHDHYGHGHGHGGHDHDGHGHGHGGH 486

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 27/64 (42%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +3

Query: 225 STDGHGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHG----HGHGEHHGGVEGAVH 392
           ++ GH  H H H  G DH  HG GH     H H G  HGHG    +GHG  HGG +   H
Sbjct: 412 ASGGHDGHGHGHG-GHDHDGHGHGHG---GHDHYGHGHGHGGHDHYGHGHGHGGHDHYGH 467

Query: 393 QVQH 404
              H
Sbjct: 468 GHGH 471

 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 28/62 (45%), Positives = 31/62 (49%), Gaps = 4/62 (6%)
 Frame = +3

Query: 201 GKNDKESHSTDGHGSHEH---AHAQGG-DHCSHGLGHTHAESHQHSGSEHGHGHGHGEHH 368
           G +D   H   GHG H+H    H  GG DH  HG GH     H H G  HGHGHG  +H 
Sbjct: 436 GGHDHYGHG-HGHGGHDHYGHGHGHGGHDHYGHGHGH---GGHDHDG--HGHGHGGHDHD 489

Query: 369 GG 374
            G
Sbjct: 490 DG 491

>ref|NP_419122.1| cation efflux family protein [Caulobacter crescentus CB15]
           gi|25399568|pir||F87286 cation efflux family protein
           [imported] - Caulobacter crescentus
           gi|13421446|gb|AAK22290.1| cation efflux family protein
           [Caulobacter crescentus CB15]
          Length = 361

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 21/44 (47%), Positives = 22/44 (49%)
 Frame = +3

Query: 237 HGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGEHH 368
           H +H HAH  G  H  HG  H H   H H    H HGHGH  HH
Sbjct: 23  HDAHGHAHDHGHGHGHHGHDHAHGHGHGHGHGHHHHGHGHHGHH 66

 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 276 HCSHGLGHTHAESHQHSGSEHGHGHGHGEHHG-GVEGAVHQVQHRAAEK 419
           H +HG  H H   H H G +H HGHGHG  HG    G  H   H  A K
Sbjct: 23  HDAHGHAHDHGHGHGHHGHDHAHGHGHGHGHGHHHHGHGHHGHHHHAPK 71

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 26/57 (45%), Positives = 28/57 (48%), Gaps = 3/57 (5%)
 Frame = +3

Query: 207 NDKESHSTD---GHGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGEHH 368
           +D   H+ D   GHG H H HA G     HG GH H   H      HGHGH HG HH
Sbjct: 23  HDAHGHAHDHGHGHGHHGHDHAHG-----HGHGHGHGHHH------HGHGH-HGHHH 67

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 20/46 (43%), Positives = 20/46 (43%)
 Frame = +3

Query: 231 DGHGSHEHAHAQGGDHCSHGLGHTHAESHQHSGSEHGHGHGHGEHH 368
           D HG H H H  G  H  H   H H   H H    HGHGH    HH
Sbjct: 24  DAHG-HAHDHGHGHGHHGHDHAHGHGHGHGHGHHHHGHGHHGHHHH 68



EST assemble image


clone accession position
1 HCL069e01_r AV643426 1 529
2 CL46d03_r AV395644 84 535




Chlamydomonas reinhardtii
Kazusa DNA Research Institute