KCC000598A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000598A_C01 KCC000598A_c01
cagggcatctgcaccctgcaTCCCCGTATATCTAACTATAATGCCGCGTCATTTAGCCCC
AAATTATGTCCAGATCTGGCATACTCCGTGACAGTGTCCTGACCCCGCAACACCCCGCAC
ACACCCTGCCGGCCGGCCCTTGCACAACTCCGCCCCCGGCCGACCCCTGCGCTCTCCCGC
CTAATACAGCATCCCACGGCTCCATGCCGCGTCTCCTTGGCTCATGTCGCTAAGCTTCGC
CGCTGCCTCCGCGAGTCCTCCGCGAGCTCCCAGAGTCCCGGAACGGCCTCCTGAGGTCGC
CAAGCCCCGCATGTGCGCTAGCCCGCCTACTGCAGCGAGGGCTGGGTCTGCCAGATCAGC
AGGCGCTTGCTGCTGGGGTTGAAGGCCTCATAAACCTTGTTGTTGGCGGCCAGCATCTTC
ATCACGTGGTCCGAGACCGACTTCGCGGGCGTGTGGTGCAGCGACTCAAGAACCTGGTTC
TTAGAGACCGCGGAATAGCGCAGGTCGCGGTCATAGGCATAGTTGAACTTCCAAATCGTC
TCATGGTAGCGCTTGTACGCAGCGGCCCAGCAGGCGTGCAGCTTGTGCTCGCGCATGAGC
GAGGGAAGCATCTGAGTATCCAGGTACCACATCACCCAGCCCGCCACCAGGGCGGCACTG
GCAGCCTCCTGCTGCAGAGACTCCGGAAgcaacttcatcgtggagaacttgcagctctag
accccgcgacaggggaggggaatgcgcgcctactgcgcgccctggtgc


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000598A_C01 KCC000598A_c01
         (768 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|...    61  2e-08
ref|NP_045241.1| 24 [Equine herpesvirus 4] gi|11278231|pir||T425...    53  6e-06
ref|NP_422235.1| arylesterase-related protein [Caulobacter cresc...    52  8e-06
ref|XP_311129.1| ENSANGP00000004749 [Anopheles gambiae] gi|30178...    52  1e-05
ref|XP_317879.1| ENSANGP00000004917 [Anopheles gambiae] gi|21300...    50  3e-05

>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
           blr0521 [Bradyrhizobium japonicum USDA 110]
          Length = 745

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 65/243 (26%), Positives = 83/243 (33%), Gaps = 20/243 (8%)
 Frame = +2

Query: 98  PDPATPRTHPAGRPLHNSAPGRPLRSPA*YSIPRLHAASPWLMSLSFAAASASPPRAPRV 277
           P PA    HP   P   +AP RP   P     P    A P             PP AP+ 
Sbjct: 70  PPPAAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPP---------PPPPPPAAPKQ 120

Query: 278 PERPPEVAKPRMCASPPTAARAGSARS--------AGACCWG*RPHKPCCWRPASSSRGP 433
           P  PP  A  +   +PP  A   +  +        A A      P  P   RP  +   P
Sbjct: 121 PSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPP 180

Query: 434 RPT---SRACGAATQEPGS*RPRNSAGRGHRHS*TSKSSHGSACTQRPSRRAACARA*AR 604
            P    +R   A T  P    P  +A            S   A T  P+   A     A 
Sbjct: 181 PPAGPAARPTPAPTATPTPVAPPPAAPTAR------PGSPAPAATPAPTPTPAPTATPAP 234

Query: 605 EASEYPGTTSPSPPPGRHW---------QPPAAETPEATSSWRTCSSRPRDRGGECAPTA 757
            A+  PG+T  +PP GR            PPAA +P A  +    ++ P   G    P+ 
Sbjct: 235 TATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATPPSG 294

Query: 758 RPG 766
           RPG
Sbjct: 295 RPG 297

 Score = 55.8 bits (133), Expect = 7e-07
 Identities = 72/247 (29%), Positives = 84/247 (33%), Gaps = 24/247 (9%)
 Frame = +2

Query: 98  PDPATPRTHPAGRPLHNSAP-----GRPLRSPA*YSIPRLHAASPWLMSLSFAAASASPP 262
           P P  P   PA  P H   P      RP  +P     P   AA P     +     A PP
Sbjct: 146 PAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPP-PPPPAGPAARPTPAPTATPTPVAPPP 204

Query: 263 RAPRV-PERPPEVAKPRMCASP-PTAARAGSARSA-------------GACCWG*RPHKP 397
            AP   P  P   A P    +P PTA  A +A  A             GA   G RP  P
Sbjct: 205 AAPTARPGSPAPAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRPGSP 264

Query: 398 -CCWRPASSSRGPRPTSRACGAATQEPGS*RP---RNSAGRGHRHS*TSKSSHGSACTQR 565
                P +    P PT+      T  P S RP      A      + T+  + G A T  
Sbjct: 265 PAAGSPPAPGATPAPTTTPAPGGTATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPP 324

Query: 566 PSRRAACARA*AREASEYPGTTSPSPPPGRHWQPPAAETPEATSSWRTCSSRPRDRGGEC 745
           P R  A            PG    +PP G     PAA TP A        +RP    G  
Sbjct: 325 PGRPGA---------GPTPGPQGGTPPAGA----PAAGTPAAPPQAGGLPARPAAPAGAA 371

Query: 746 APTARPG 766
           AP+  PG
Sbjct: 372 APSTVPG 378

 Score = 43.5 bits (101), Expect = 0.004
 Identities = 53/207 (25%), Positives = 67/207 (31%), Gaps = 6/207 (2%)
 Frame = +2

Query: 83  TP*QCPDPATPRTH-PAGRPLHNSAPGRPLRSPA*YSIPRLHAASPWLMSLSFAAASASP 259
           TP   P PA   T  P   P   S PG P         P +   SP         A+ SP
Sbjct: 219 TPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRPGSP--------PAAGSP 270

Query: 260 PRAPRVPERPPEVAKPRMCASPPTAARAGSARSAGACCWG*RPHKPCCWRPASSSRGPRP 439
           P AP     P     P   A+PP+                 RP       P +++  P  
Sbjct: 271 P-APGATPAPTTTPAPGGTATPPSG----------------RPGPASTPAPGAATPAPTA 313

Query: 440 TSRACGAATQEPGS*RPRNSAGRGHRHS*TSKSSHGSACTQRPSRRAA-----CARA*AR 604
           T    GA T  PG  RP      G +       +  +     P +         A A A 
Sbjct: 314 TPAPGGALTPPPG--RPGAGPTPGPQGGTPPAGAPAAGTPAAPPQAGGLPARPAAPAGAA 371

Query: 605 EASEYPGTTSPSPPPGRHWQPPAAETP 685
             S  PG+ + +PPP R    P   TP
Sbjct: 372 APSTVPGSAAATPPPNRAQFAPPTVTP 398

>ref|NP_045241.1| 24 [Equine herpesvirus 4] gi|11278231|pir||T42567 tegument protein 24
            - equine herpesvirus 4 (strain NS80567)
            gi|2605967|gb|AAC59539.1| 24 [Equine herpesvirus 4]
          Length = 3534

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 51/205 (24%), Positives = 76/205 (36%), Gaps = 2/205 (0%)
 Frame = +2

Query: 86   P*QCPDPATPRTHPA-GRPLHNSAPGRPLRSPA*YSIPRLHAASPWLMSLSFAAASASPP 262
            P   P P+ P   PA  +P    AP +P  +PA    P   AA+P   S   AA + S P
Sbjct: 2722 PAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPA----PSKPAAAP-APSKPAAAPAPSKP 2776

Query: 263  RAPRVPERPPEVAKPRMCASPPTAARAGSARSAGACCWG*RPHKPCCW-RPASSSRGPRP 439
             A   P +P     P   A+ P  ++  +A +         P KP     P+  +  P P
Sbjct: 2777 AAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAP 2836

Query: 440  TSRACGAATQEPGS*RPRNSAGRGHRHS*TSKSSHGSACTQRPSRRAACARA*AREASEY 619
            +  A   A  +P       +A         + +    A    PS+ AA        A+  
Sbjct: 2837 SKPAAAPAPSKP-------AAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPA 2889

Query: 620  PGTTSPSPPPGRHWQPPAAETPEAT 694
            P   + +P P +    PA   P+ T
Sbjct: 2890 PSKPAAAPAPSKPAAAPAPSKPQNT 2914

 Score = 50.1 bits (118), Expect = 4e-05
 Identities = 52/223 (23%), Positives = 77/223 (34%), Gaps = 1/223 (0%)
 Frame = +2

Query: 98   PDPATPRTHPAGRPLHNSAPGRPLRSPA*YSIPRLHAASPWLMSLSFAAASASPPRAPRV 277
            PDP         +P    AP +P  +PA    P   AA+P   S   AA + S P A   
Sbjct: 2709 PDPNEALLTAPSKPAAAPAPSKPAAAPA----PSKPAAAP-APSKPAAAPAPSKPAAAPA 2763

Query: 278  PERPPEVAKPRMCASPPTAARAGSARSAGACCWG*RPHKPCCW-RPASSSRGPRPTSRAC 454
            P +P     P   A+ P  ++  +A +         P KP     P+  +  P P+  A 
Sbjct: 2764 PSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAA 2823

Query: 455  GAATQEPGS*RPRNSAGRGHRHS*TSKSSHGSACTQRPSRRAACARA*AREASEYPGTTS 634
              A  +P +                + +    A    PS+ AA        A+  P   +
Sbjct: 2824 APAPSKPAA----------------APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPA 2867

Query: 635  PSPPPGRHWQPPAAETPEATSSWRTCSSRPRDRGGECAPTARP 763
             +P P +    PA   P A  +     S+P        P A P
Sbjct: 2868 AAPAPSKPAAAPAPSKPAAAPA----PSKPAAAPAPSKPAAAP 2906

>ref|NP_422235.1| arylesterase-related protein [Caulobacter crescentus CB15]
           gi|25400354|pir||G87675 arylesterase-related protein
           [imported] - Caulobacter crescentus
           gi|13425157|gb|AAK25403.1| arylesterase-related protein
           [Caulobacter crescentus CB15]
          Length = 438

 Score = 52.4 bits (124), Expect = 8e-06
 Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 5/196 (2%)
 Frame = +2

Query: 125 PAGRPLHNSAPGRPLRSPA*YSIPRLHAASPWLMSLSFAAASASPPRAPRVPERPPEV-A 301
           PA +     AP  P  +PA    P   AA+P  +    AA  ASPP+A   P+  P+  A
Sbjct: 261 PAAKVEPAPAPAAPAPAPAPAKAPEPAAAAPEPVK---AAEPASPPKAKAAPKAAPKADA 317

Query: 302 KPRMCASPPTAARAGSARSAGACCWG*RPHKPCCWRPASSSRGPR---PTSRACGAATQE 472
           KP+  A  P A +A     A           P    PA S+  P+   P +    AA + 
Sbjct: 318 KPKATAKAPVAKKAAPKAKAA----------PAAEAPAKSAAAPKAKAPAAPKAAAAAKP 367

Query: 473 PGS*RPRNSAGRGHRHS*TSKSSHGSACTQRPSRRAACARA*AREASE-YPGTTSPSPPP 649
               +P+ +A         + ++  +   ++P+   A A+  A+ A++  P   +P+ P 
Sbjct: 368 KAEAKPKTAA--------KAPAAETAPAAKKPAAPKAAAKPAAKTATKAAPAAKAPAAPK 419

Query: 650 GRHWQPPAAETPEATS 697
               + PA + P  +S
Sbjct: 420 AA--KAPATKAPAKSS 433

 Score = 37.4 bits (85), Expect = 0.27
 Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 13/145 (8%)
 Frame = +2

Query: 98  PDP---ATPRTHPAGRPLHNSAPGRPLRSPA*YSIPRLHAASPWLMSLSFAAASASPPRA 268
           P+P   A P + P  +    +AP    +  A    P    A+P   +   A A A    A
Sbjct: 291 PEPVKAAEPASPPKAKAAPKAAPKADAKPKATAKAPVAKKAAPKAKAAPAAEAPAKSAAA 350

Query: 269 PRV--PERPPEVA--KPRMCASPPTAARAGSARSAGAC------CWG*RPHKPCCWRPAS 418
           P+   P  P   A  KP+  A P TAA+A +A +A A           +P      + A 
Sbjct: 351 PKAKAPAAPKAAAAAKPKAEAKPKTAAKAPAAETAPAAKKPAAPKAAAKPAAKTATKAAP 410

Query: 419 SSRGPRPTSRACGAATQEPGS*RPR 493
           +++ P     A   AT+ P    P+
Sbjct: 411 AAKAPAAPKAAKAPATKAPAKSSPK 435

>ref|XP_311129.1| ENSANGP00000004749 [Anopheles gambiae] gi|30178092|gb|EAA06612.2|
            ENSANGP00000004749 [Anopheles gambiae str. PEST]
          Length = 633

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 65/211 (30%), Positives = 79/211 (36%), Gaps = 23/211 (10%)
 Frame = +2

Query: 104  PATPRTHPAGRPLHNSAPGRPLRSPA*YSIPRLHAASPWLMSLSFAAASASPPRAP-RVP 280
            PA P T P G P+    P  P   PA  +         W       AA ASPP  P R P
Sbjct: 431  PAPPPTPPFG-PMPLPMPSMPAPPPAPIAFTTTLLPIAW----PTRAARASPPALPFRAP 485

Query: 281  ERPP--EVAKPRMCASPPTAARAGSA---RSAGAC----CWG*RPHKPCCWRPASS-SRG 430
             RPP  + A P + A+   AA A +A   R A  C    C    P  P   RP+    R 
Sbjct: 486  ARPPSAQAAGPGVVAAAAAAAAAPAAVAVRPASPCTPSPCAAACPTSPSAARPSGCPGRS 545

Query: 431  PR---PTSRACG-----AATQEPGS*RP----RNSAGRGHRHS*TSKSSHGSACTQRPSR 574
            P    P +R  G      A   PG  R     R+SAG        S     ++C  RP  
Sbjct: 546  PPSAPPAARPAGPPAACTARAPPGRSRSAPPSRSSAGPAVASGCGSPPDCSASCAARPPA 605

Query: 575  RAACARA*AREASEYPGTTSPSPPPGRHWQP 667
              A  R     +S  PG + P+P P     P
Sbjct: 606  SPAAPR-----SSAPPGASRPAPRPAAPGAP 631

 Score = 33.9 bits (76), Expect = 2.9
 Identities = 42/135 (31%), Positives = 47/135 (34%), Gaps = 6/135 (4%)
 Frame = +2

Query: 104 PATPRTHPAGRPLHNSAP---GRPLRSPA*YSIPRLHAASPWLMSLSFAAASASPPRA-- 268
           P TP    A  P   SA    G P RSP         +A P       AA  A PP A  
Sbjct: 519 PCTPSPCAAACPTSPSAARPSGCPGRSPP--------SAPP-------AARPAGPPAACT 563

Query: 269 PRVPERPPEVAKP-RMCASPPTAARAGSARSAGACCWG*RPHKPCCWRPASSSRGPRPTS 445
            R P      A P R  A P  A+  GS     A C    P  P   R ++     RP  
Sbjct: 564 ARAPPGRSRSAPPSRSSAGPAVASGCGSPPDCSASCAARPPASPAAPRSSAPPGASRPAP 623

Query: 446 RACGAATQEPGS*RP 490
           R        PG+ RP
Sbjct: 624 RPAA-----PGAPRP 633

>ref|XP_317879.1| ENSANGP00000004917 [Anopheles gambiae] gi|21300834|gb|EAA12979.1|
           ENSANGP00000004917 [Anopheles gambiae str. PEST]
          Length = 257

 Score = 50.4 bits (119), Expect = 3e-05
 Identities = 63/234 (26%), Positives = 84/234 (34%), Gaps = 14/234 (5%)
 Frame = +2

Query: 104 PATPRTHPAGRPLHNSAPGRPLRSPA*YSIPRLHAASPWLMSLSFAAASASPPRAPRVPE 283
           P  PR+    RP        P R+PA    PR   ++P  +      A+ASPP  P  P 
Sbjct: 14  PRRPRSS-TDRPTPPRTASGPSRTPA--RPPRTRPSAPGRIR----RAAASPPPFPPAP- 65

Query: 284 RPPEVAKPRMCASPPTAARAGSARSAGACCWG*RPHK-PCCWRP---ASSSRGPRPTSRA 451
                A+ R C S   +A A  AR   + C   RP   P C+ P   A + R  RP    
Sbjct: 66  -----ARRRGCFSGDFSASAAPARCCPSSCCARRPRSPPFCFPPPAAAPARRAHRPPRCR 120

Query: 452 CGAATQEPGS*R--PRNSAGRGHRHS*TSKSSHGSACTQRPSRRAACARA*AREASEYPG 625
           C  A   P +    P  S+ R    S  S ++   +    P R    A +  R  +   G
Sbjct: 121 CAPAAPSPPARAFGPWRSSTRSSARSPQSPTAGWRSFAPTPRRPCTAADSGTRRTAA-SG 179

Query: 626 TTSPSPPPGRHWQPPA--------AETPEATSSWRTCSSRPRDRGGECAPTARP 763
           T     P G     PA        A +P  +      +SRP  R       A P
Sbjct: 180 TRCRGTPSGTRCSAPAPCAASPASARSPPVSPRTARSASRPSSRSASAPSRASP 233

 Score = 33.9 bits (76), Expect = 2.9
 Identities = 48/168 (28%), Positives = 59/168 (34%), Gaps = 20/168 (11%)
 Frame = -3

Query: 760 ARSRRAFPSPVAGSRAASSPR*SCFRSLCSRRLPVPPWWRAG*CGTWILRCFPRSCASTS 581
           AR R  F    + S A   P   C  S C+RR   PP+            CFP   A+ +
Sbjct: 66  ARRRGCFSGDFSASAA---PARCCPSSCCARRPRSPPF------------CFPPPAAAPA 110

Query: 580 ----------CTPAGPLRTSATMRRFGSSTMPMTATCAIP----RSLRTRFLSRCTTRPR 443
                     C PA P   +     + SST     +   P    RS        CT    
Sbjct: 111 RRAHRPPRCRCAPAAPSPPARAFGPWRSSTRSSARSPQSPTAGWRSFAPTPRRPCTAADS 170

Query: 442 SRSRT----T**RCWPPTTRFMRPSTPAASAC*SGRP--SPRCSRRAS 317
              RT    T  R  P  TR   P+  AAS   +  P  SPR +R AS
Sbjct: 171 GTRRTAASGTRCRGTPSGTRCSAPAPCAASPASARSPPVSPRTARSAS 218

 Score = 33.1 bits (74), Expect = 5.0
 Identities = 54/200 (27%), Positives = 71/200 (35%), Gaps = 24/200 (12%)
 Frame = -3

Query: 604 PRSCASTSCTPAGPLRTSAT----MRRFGSSTMPMTATCAIPRS------------LRTR 473
           PR+ +  S TPA P RT  +    +RR  +S  P     A  R              R  
Sbjct: 27  PRTASGPSRTPARPPRTRPSAPGRIRRAAASPPPFPPAPARRRGCFSGDFSASAAPARCC 86

Query: 472 FLSRCTTRPRSRSRTT**RCWPPTTRFMRPSTPAASAC*SGRPSPRCSRRASAHA----G 305
             S C  RPRS        C+PP         PAA+        PRC    +A +     
Sbjct: 87  PSSCCARRPRSPP-----FCFPP---------PAAAPARRAHRPPRCRCAPAAPSPPARA 132

Query: 304 LGDLRRPFRDSGSSRRTRGGSGEA*RHEPRRRGMEPWDAVLGGRAQGSAGGGVVQG-PAG 128
            G  R   R S  S ++      +    PRR    P  A   G  + +A G   +G P+G
Sbjct: 133 FGPWRSSTRSSARSPQSPTAGWRSFAPTPRR----PCTAADSGTRRTAASGTRCRGTPSG 188

Query: 127 RVC---AGCCGVRTLSRSMP 77
             C   A C      +RS P
Sbjct: 189 TRCSAPAPCAASPASARSPP 208



EST assemble image


clone accession position
1 CL46b09_r AV395653 1 490
2 CM024f11_r AV388220 229 828




Chlamydomonas reinhardtii
Kazusa DNA Research Institute