Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000593A_C01 KCC000593A_c01
(515 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_083213.1| RIKEN cDNA 4933406N12 [Mus musculus] gi|1285558... 37 0.19
ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca] 35 0.43
ref|NP_630484.1| putative transposase [Streptomyces coelicolor A... 35 0.57
gb|AAH00121.1| MGC3130 protein [Homo sapiens] 34 0.97
ref|XP_305849.1| hypothetical protein XP_305849 [Homo sapiens] 34 1.3
>ref|NP_083213.1| RIKEN cDNA 4933406N12 [Mus musculus] gi|12855587|dbj|BAB30389.1|
unnamed protein product [Mus musculus]
Length = 467
Score = 36.6 bits (83), Expect = 0.19
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Frame = +2
Query: 134 SAYLCPTAPAHSLGAPNHELCLVSSVRQSSPSCQLVKPGHWSATS--------------- 268
S YL PTAP+ S P H ++ R +SP+C L PGH A S
Sbjct: 385 STYLPPTAPSVSNFIPQHCNAMLCPARPTSPNC-LCTPGHELAASSRAASASIFRGFRAA 443
Query: 269 TGSNVHVTSPRPLPSP 316
+ S+ + P LPSP
Sbjct: 444 SASDHQASQPPALPSP 459
>ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca]
Length = 754
Score = 35.4 bits (80), Expect = 0.43
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 149 PTAPAHSLGAPNHELCLVSSVRQSSPSCQLVKPGHWSATSTGSNVHVTSPRPLPSPTTGL 328
PT+P + AP+ + C +S+ S+PS V P S S+ S P+ PSP
Sbjct: 240 PTSPPPTWPAPSSKACSAASLTPSTPSSTKVSP---STVSSSSAAAPAPPQSAPSPPKSS 296
Query: 329 DAP 337
AP
Sbjct: 297 AAP 299
>ref|NP_630484.1| putative transposase [Streptomyces coelicolor A3(2)]
gi|7481634|pir||T34887 probable transposase -
Streptomyces coelicolor gi|3218345|emb|CAA19604.1|
putative transposase [Streptomyces coelicolor A3(2)]
Length = 487
Score = 35.0 bits (79), Expect = 0.57
Identities = 28/89 (31%), Positives = 34/89 (37%)
Frame = +2
Query: 119 RRTK*SAYLCPTAPAHSLGAPNHELCLVSSVRQSSPSCQLVKPGHWSATSTGSNVHVTSP 298
R TK L T P P+ L R ++V HW TG+ VT+
Sbjct: 373 RATKSQVSLHSTVPD-----PSGRTLLAVHPRAVGRGARIVDETHWDGLPTGAGRRVTTG 427
Query: 299 RPLPSPTTGLDAPLLPQTNRTACLLTEAA 385
LPSP G P P+T LL AA
Sbjct: 428 DALPSPRRG--QPAGPETGPLQALLNRAA 454
>gb|AAH00121.1| MGC3130 protein [Homo sapiens]
Length = 521
Score = 34.3 bits (77), Expect = 0.97
Identities = 25/74 (33%), Positives = 37/74 (49%), Gaps = 6/74 (8%)
Frame = +2
Query: 143 LCPTAPAHSLGAPNHELCLVSSVRQSS---PSC---QLVKPGHWSATSTGSNVHVTSPRP 304
L PTAP+ +LG P+ +LCL +S S+ PSC ++P S++ G+ VT
Sbjct: 63 LHPTAPSEALGLPDLDLCLPASSTPSADSRPSCIGAAPLRPVSTSSSWIGNQRRVTVTEV 122
Query: 305 LPSPTTGLDAPLLP 346
L P + L P
Sbjct: 123 LREPARPQSSALHP 136
>ref|XP_305849.1| hypothetical protein XP_305849 [Homo sapiens]
Length = 241
Score = 33.9 bits (76), Expect = 1.3
Identities = 25/72 (34%), Positives = 34/72 (46%)
Frame = +2
Query: 215 QSSPSCQLVKPGHWSATSTGSNVHVTSPRPLPSPTTGLDAPLLPQTNRTACLLTEAALLG 394
+S CQ ++ + G VH SP +P P + L A L T RT+ +E LL
Sbjct: 145 KSQFECQQLRAHRPPRETDGRPVHSRSPADIPLPRSALLALALC-TLRTSIHTSEMLLLP 203
Query: 395 YA*PLIRPCQSP 430
PL+ PC SP
Sbjct: 204 PETPLMSPCLSP 215
