KCC000587A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000587A_C01 KCC000587A_c01
CAAGGACTACTGTTACAGTGGACCGCTCCGTTAGCCTCCGTGCAGCTGGATGTTGCTCTG
CACTCACTCCTCCCGAGTCTGCAACATAACATACACGCAACTCGACTGCATGCCCCGGTG
ATGCTTGGGGCCCATCAACTTCGCAAGTATTGTGCACCAAATTGTTTGTACGGTAGCTAT
GGCTCCCGCAAGTTCCGTGTTCTCCACATACCTCTAGGAAGAATTTTGTAGGGAATGAAT
CATCATCCGCGCACCGCGTCACGACGTCAACCATCCACACAGGCGTCGCAAGGAGCTCTG
TAGTTGGTGCTGCACATCATCGCTGGCAGCAGCCCAATAGGGCACTGCCACCCGCCAGTC
GTCTTTGGTGCACACATTGACTACCGCCCAGCCTTTTGTACTGCTTGTTCTTCTCGCCTC
GTTGCACTCCTAGTTCGAGCCCCCGTGGATGTAGTCGCCCGCTGACGCGCCACACCCGCG
T


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000587A_C01 KCC000587A_c01
         (481 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO39049.1| TSP1 domain-containing protein TSP9 precursor [Cr...    33  1.3
emb|CAD98628.1| sporozoite cysteine-rich protein, possible [Cryp...    33  1.3
ref|XP_310741.1| ENSANGP00000021947 [Anopheles gambiae] gi|21294...    32  3.9
ref|NP_571936.1| jagged1 [Danio rerio] gi|20455036|sp|Q90Y57|JAG...    32  5.1
gb|AAB27041.1| plasma albumin prepeptide [Petromyzon marinus=lam...    31  6.6

>gb|AAO39049.1| TSP1 domain-containing protein TSP9 precursor [Cryptosporidium
           parvum]
          Length = 457

 Score = 33.5 bits (75), Expect = 1.3
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
 Frame = -1

Query: 280 VWMVDVVTRCADDDSFPTKFFLEVCGEHG---TCGSHSYRTNNLVHNTCEVDGPQASPGH 110
           +W  D+  RC D++S      +E C E      C   S+ + ++  +TC        PG+
Sbjct: 272 IWKSDIKGRCEDNES-----DIESCNEQSCPVNCRLSSWTSWSICSSTC-------GPGN 319

Query: 109 AVELRVCYV-ADSGGVSAEQHPAARRLTERST 17
            +  R+    +D GGV   Q P  + +TER++
Sbjct: 320 KMRYRIILAQSDLGGV---QCPTEKEITERAS 348

>emb|CAD98628.1| sporozoite cysteine-rich protein, possible [Cryptosporidium parvum]
          Length = 437

 Score = 33.5 bits (75), Expect = 1.3
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
 Frame = -1

Query: 280 VWMVDVVTRCADDDSFPTKFFLEVCGEHG---TCGSHSYRTNNLVHNTCEVDGPQASPGH 110
           +W  D+  RC D++S      +E C E      C   S+ + ++  +TC        PG+
Sbjct: 252 IWKSDIKGRCEDNES-----DIESCNEQSCPVNCRLSSWTSWSICSSTC-------GPGN 299

Query: 109 AVELRVCYV-ADSGGVSAEQHPAARRLTERST 17
            +  R+    +D GGV   Q P  + +TER++
Sbjct: 300 KMRYRIILAQSDLGGV---QCPTEKEITERAS 328

>ref|XP_310741.1| ENSANGP00000021947 [Anopheles gambiae] gi|21294520|gb|EAA06665.1|
            ENSANGP00000021947 [Anopheles gambiae str. PEST]
          Length = 2593

 Score = 32.0 bits (71), Expect = 3.9
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +1

Query: 7    LLLQWTAPLASVQLDVALHSLLPSLQHNIHATRLHAPVMLGAHQLRKYCAPNCLYGSY-- 180
            L L  +A + S+ L  ALH  +P L+ N+   RLHA + +     R       +YG Y  
Sbjct: 1651 LELDSSATIGSIGLLDALHRAMPRLERNVPPDRLHAIIDIWRSNHR------AVYGHYEA 1704

Query: 181  -GSRKFRVLHIPLGR 222
                 FR L +  GR
Sbjct: 1705 AAEAYFRFLQLSSGR 1719

>ref|NP_571936.1| jagged1 [Danio rerio] gi|20455036|sp|Q90Y57|JAG1_BRARE Jagged 1
           precursor (Jagged1) gi|15799274|gb|AAL08213.1|AF229448_1
           jagged1 [Danio rerio]
          Length = 1242

 Score = 31.6 bits (70), Expect = 5.1
 Identities = 18/51 (35%), Positives = 23/51 (44%), Gaps = 3/51 (5%)
 Frame = -1

Query: 316 CAAPTTELLATPVWMVDVVTRCADDDSFPTKFFL---EVCGEHGTCGSHSY 173
           C+      L TP  ++D  T     +S P    L    VCG HG C SHS+
Sbjct: 561 CSQLKDHCLITPCQVIDSCTVAVVSNSTPGGLRLISSSVCGPHGRCRSHSH 611

>gb|AAB27041.1| plasma albumin prepeptide [Petromyzon marinus=lampreys, liver,
            Peptide, 1423 aa]
          Length = 1423

 Score = 31.2 bits (69), Expect = 6.6
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 16/73 (21%)
 Frame = -1

Query: 259  TRCADDDSFPTKFFLEVCGEHGTCGSHS----------------YRTNNLVHNTCEVDGP 128
            T C  D+SF      E+CG+HG   +H                 ++ +  VH+  E+   
Sbjct: 1289 THCLIDESF--HLHAEMCGDHGYIMAHPGVANCCKSDVSEQGTCFKIHEDVHHAEEILSK 1346

Query: 127  QASPGHAVELRVC 89
              SP H    RVC
Sbjct: 1347 DVSPAHPTAERVC 1359



EST assemble image


clone accession position
1 LC024g07_r AV620640 1 525
2 CL44h11_r AV395600 47 528
3 LCL034e05_r AV627958 48 367




Chlamydomonas reinhardtii
Kazusa DNA Research Institute