KCC000585A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000585A_C01 KCC000585A_c01
gtgcaggccggtgtcctggccggcgaggtgtcggacatcgtcctgctggacgtgaccccg
ctgtcgctgggcctGGAGACCCTGGGCGGCGTCATGACCAAGCTCATCCCCCGCAACACC
ACCCTGCCCACCTCCAAGTCTGAGGTCTTCTCCACCGCCGCCGACGGTCAGACTTCGGTG
GAGATCAACGTGCTGCAGGGCGAGCGCGAGTTTGCCCGCGACAACAAGTCGCTGGGCACC
TTCCGCCTGGACGGCATCCCGCCCGCGCCCCGCGGTGTGCCCCAGATTGAGGTCAAGTTC
GACATTGACGCGAACGGCATCCTGTCCGTGACCGCCACCGACAAGGGCACTAGCAAGAAG
CAGGACATCCGCATCACCGGCGCCTCCACCCTGGACAAGGGCGACGTGGAGCGCATGGTC
AAGGAGGCGGAGAAGTTCGCCGGCGAGGACAAGAAGCGCCGCGAGAGCGTGGAGACCAAG
AACCAGGCGGAGACCATGGTGTACCAGACCGAGAAGCAGCTCAAGGAGTTTGAGGGCAAG
GTGCCGGCCGACATTAAGGCCAAGGTGGAGGCCAAGCTGGGCGAGCTCAAGGCGGCGCTG
CCGGCCGACGATGCTGAGGCCACCAAGGCCGCCATGAACGCGCTGCAGCAGGAGGTGATG
GCTATGGGCCAGGCCATGTACAGCCAGGCTGGCTGCTGCGCCAGGCGGCGCCCCGGGCGC
TGAGCCCGGCTGCCGGCGCGGGCTGCGGGTGGCTGCCCCCGGCGGCAAGAAGTGACGACG
ACGTCATTGACGCCGAGTTCACTGACAAGAAGTAAGCGGCCTGCATTGAGGCTACTGGCG
AGCTGACCGGGCAGGATGGATGTGTGATGGCGGCTGAGGGGTGCATTTGAGCGTGGGTGC
TTGTAGTAATGCGCTATTTTGGACGTTGCCGCGGCATATCACTACCAATCACTGCGGCCG
TAGCCACGTCTGCTGTTGAGCGTGGTTGGCGCCGGTTGCGATTGGGGCGCTGGATGTGTA
TTGATGTTTGGTGTGTTTGGCTGTGTGTGTGTGCTCTGTTAACGGACGTTGCGCTCCTCG
CGTGATCTGCTGGGAGGCTTGTCGCGCCTTTGCCATATAAATTTGGCTGCAAGTGTTTGG
TTGCGGCTAGTCGACATCTCCCAGCTGCCTGCGCTTGCAGCACGCTATACAGCGAGGCGC
GGCTGGCGCGGGGAGCTGTGGCGTATGACATGTATGACCTGCTGAACCTGACGTGAGTGT
GGAGTGGAGTGAAGGAATGGACATGCAAAGCAAGCGTACACAGACATTGCTTGGTAGGCT
CCAGCCATATGTGGTTTTGATGAGGGTGCAGATTAGAGTAAGAGGCCGCAAGCACCTGTC
GCAGTGCGCAGGCGGGCATGCTTTGCGTGCACAATCACGGAGGGAGTGAGGCGAGACCGA
GTGAGCTACCCAGGGTAGCTGCGGAGGCATGACGATGTGCTGGACatgaagtcgagcggt
gtaaggctgcgcgggctg


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000585A_C01 KCC000585A_c01
         (1518 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T08151 dnaK-type molecular chaperone hsp70b precursor, chlo...   446  e-124
emb|CAB71138.2| heat shock protein [Dunaliella salina]                365  e-102
gb|AAL66864.1| heat shock protein 70B [Dunaliella salina]             363  3e-99
pir||T10248 heat shock protein, 70K, chloroplast - cucumber gi|1...   358  1e-97
gb|AAC03416.1| heat shock protein 70 precursor [Citrullus lanatus]    354  1e-97

>pir||T08151 dnaK-type molecular chaperone hsp70b precursor, chloroplast -
            Chlamydomonas reinhardtii gi|1225970|emb|CAA65356.1| heat
            shock protein 70B [Chlamydomonas reinhardtii]
          Length = 679

 Score =  446 bits (1148), Expect = e-124
 Identities = 238/253 (94%), Positives = 238/253 (94%)
 Frame = +1

Query: 1    VQAGVLAGEVSDIVLLDVTPLSLGLETLGGVMTKLIPRNTTLPTSKSEVFSTAADGQTSV 180
            VQAGVLAGEVSDIVLLDVTPLSLGLETLGGVMTKLIPRNTTLPTSKSEVFSTAADGQTSV
Sbjct: 411  VQAGVLAGEVSDIVLLDVTPLSLGLETLGGVMTKLIPRNTTLPTSKSEVFSTAADGQTSV 470

Query: 181  EINVLQGEREFARDNKSLGTFRLDGIPPAPRGVPQIEVKFDIDANGILSVTATDKGTSKK 360
            EINVLQGEREFARDNKSLGTFRLDGIPPAPRGVPQIEVKFDIDANGILSVTATDKGTSKK
Sbjct: 471  EINVLQGEREFARDNKSLGTFRLDGIPPAPRGVPQIEVKFDIDANGILSVTATDKGTSKK 530

Query: 361  QDIRITGASTLDKGDVERMVKEAEKFAGEDKKRRESVETKNQAETMVYQTEKQLKEFEGK 540
            QDIRITGASTLDKGDVERMVKEAEKFAGEDKKRRESVETKNQAETMVYQTEKQLKEFEGK
Sbjct: 531  QDIRITGASTLDKGDVERMVKEAEKFAGEDKKRRESVETKNQAETMVYQTEKQLKEFEGK 590

Query: 541  VPADIKAKVEAKLGELKAALPADDAEATKAAMNALQQEVMAMGQAMYSQAGCCARRRPGR 720
            VPADIKAKVEAKLGELKAALPADDAEATKAAMNALQQEVMAMGQAMYSQAG      PG 
Sbjct: 591  VPADIKAKVEAKLGELKAALPADDAEATKAAMNALQQEVMAMGQAMYSQAGAAPGGAPGA 650

Query: 721  *ARLPARAAGGCP 759
                 A  AGG P
Sbjct: 651  EPGAGA-GAGGAP 662

 Score = 43.1 bits (100), Expect = 0.013
 Identities = 29/61 (47%), Positives = 31/61 (50%)
 Frame = +3

Query: 630 RHERAAAGGDGYGPGHVQPGWLLRQAAPRALSPAAGAGCGWLPPAARSDDDVIDAEFTDK 809
           + E  A G   Y      PG      AP A  P AGAG G  P   + DDDVIDAEFTDK
Sbjct: 626 QQEVMAMGQAMYSQAGAAPG-----GAPGA-EPGAGAGAGGAP-GGKKDDDVIDAEFTDK 678

Query: 810 K 812
           K
Sbjct: 679 K 679

>emb|CAB71138.2| heat shock protein [Dunaliella salina]
          Length = 670

 Score =  365 bits (938), Expect(2) = e-102
 Identities = 186/231 (80%), Positives = 207/231 (89%)
 Frame = +1

Query: 1    VQAGVLAGEVSDIVLLDVTPLSLGLETLGGVMTKLIPRNTTLPTSKSEVFSTAADGQTSV 180
            VQAGVL+GEVSDIVLLDVTPLSLGLETLGGV TKLI RNTTLPTSKSEVFSTAADGQTSV
Sbjct: 408  VQAGVLSGEVSDIVLLDVTPLSLGLETLGGVATKLITRNTTLPTSKSEVFSTAADGQTSV 467

Query: 181  EINVLQGEREFARDNKSLGTFRLDGIPPAPRGVPQIEVKFDIDANGILSVTATDKGTSKK 360
            EINVLQGEREFARDNKSLGTFRLDGIPPAPRG+PQIEVKFDIDANGILSVTATDKG+ KK
Sbjct: 468  EINVLQGEREFARDNKSLGTFRLDGIPPAPRGMPQIEVKFDIDANGILSVTATDKGSGKK 527

Query: 361  QDIRITGASTLDKGDVERMVKEAEKFAGEDKKRRESVETKNQAETMVYQTEKQLKEFEGK 540
            QDI+ITGASTL K DVERMV +AE+FAGEDKK+RE+V+TKNQAE+M+YQTEKQL EF+ K
Sbjct: 528  QDIKITGASTLGKDDVERMVADAERFAGEDKKKREAVDTKNQAESMIYQTEKQLDEFKEK 587

Query: 541  VPADIKAKVEAKLGELKAALPADDAEATKAAMNALQQEVMAMGQAMYSQAG 693
            VP D+K+ ++ ++ EL+ +  ADD E  K  + ALQQEVM MGQAMY Q G
Sbjct: 588  VPEDVKSSIQNRVKELRESAGADDVEGMKKGIEALQQEVMKMGQAMYGQPG 638

 Score = 29.6 bits (65), Expect(2) = e-102
 Identities = 16/28 (57%), Positives = 17/28 (60%)
 Frame = +3

Query: 729 AAGAGCGWLPPAARSDDDVIDAEFTDKK 812
           AAGA  G   P    D  VIDAE+TDKK
Sbjct: 643 AAGAQPGSGEPPKDGDGGVIDAEYTDKK 670

>gb|AAL66864.1| heat shock protein 70B [Dunaliella salina]
          Length = 669

 Score =  363 bits (933), Expect = 3e-99
 Identities = 189/251 (75%), Positives = 213/251 (84%)
 Frame = +1

Query: 1    VQAGVLAGEVSDIVLLDVTPLSLGLETLGGVMTKLIPRNTTLPTSKSEVFSTAADGQTSV 180
            VQAGVL+GEVSDIVLLDVTPLSLGLETLGGV TKLI RNTTLPTSKSEVFSTAADGQTSV
Sbjct: 408  VQAGVLSGEVSDIVLLDVTPLSLGLETLGGVATKLITRNTTLPTSKSEVFSTAADGQTSV 467

Query: 181  EINVLQGEREFARDNKSLGTFRLDGIPPAPRGVPQIEVKFDIDANGILSVTATDKGTSKK 360
            EINVLQGEREFARDNKSLGTFRLDGIPPAPRG+PQIEVKFDIDANGILSVTATDKG+ KK
Sbjct: 468  EINVLQGEREFARDNKSLGTFRLDGIPPAPRGMPQIEVKFDIDANGILSVTATDKGSGKK 527

Query: 361  QDIRITGASTLDKGDVERMVKEAEKFAGEDKKRRESVETKNQAETMVYQTEKQLKEFEGK 540
            QDI+ITGASTL K DVERMV EAE+FAGEDKK+RE+V+TKNQAE+M+YQTEKQL EF+ K
Sbjct: 528  QDIKITGASTLGKDDVERMVAEAERFAGEDKKKREAVDTKNQAESMIYQTEKQLDEFKEK 587

Query: 541  VPADIKAKVEAKLGELKAALPADDAEATKAAMNALQQEVMAMGQAMYSQAGCCARRRPGR 720
            VP D+K+ ++ ++ EL+ +  ADD E  K  + +LQQEVM MGQAMY Q    A    G+
Sbjct: 588  VPEDVKSSIQNRVKELRDSAGADDVEGMKKGIESLQQEVMKMGQAMYGQPSGDAGAAGGQ 647

Query: 721  *ARLPARAAGG 753
                P + + G
Sbjct: 648  PGPEPPKDSDG 658

>pir||T10248 heat shock protein, 70K, chloroplast - cucumber
            gi|1143427|emb|CAA52149.1| heat shock protein 70 [Cucumis
            sativus]
          Length = 707

 Score =  358 bits (920), Expect = 1e-97
 Identities = 184/239 (76%), Positives = 207/239 (85%)
 Frame = +1

Query: 1    VQAGVLAGEVSDIVLLDVTPLSLGLETLGGVMTKLIPRNTTLPTSKSEVFSTAADGQTSV 180
            VQAGVLAG+VSDIVLLDV+PLSLGLETLGGVMTK+IPRNTTLPTSKSEVFSTAADGQTSV
Sbjct: 441  VQAGVLAGDVSDIVLLDVSPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSV 500

Query: 181  EINVLQGEREFARDNKSLGTFRLDGIPPAPRGVPQIEVKFDIDANGILSVTATDKGTSKK 360
            EINVLQGEREF RDNKSLG+FRLDGIPPAPRGVPQIEVKFDIDANGILSVTA DKG+ KK
Sbjct: 501  EINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVTAIDKGSGKK 560

Query: 361  QDIRITGASTLDKGDVERMVKEAEKFAGEDKKRRESVETKNQAETMVYQTEKQLKEFEGK 540
            QDI ITGASTL   +VERMV EA+KFA EDK++R++++TKNQA+++VYQTEKQLKE   K
Sbjct: 561  QDITITGASTLPSDEVERMVSEADKFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDK 620

Query: 541  VPADIKAKVEAKLGELKAALPADDAEATKAAMNALQQEVMAMGQAMYSQAGCCARRRPG 717
            VP  +K KVE+KLGELK A+     EA K AM AL QEVM +GQ++Y+Q G  A   PG
Sbjct: 621  VPGPVKEKVESKLGELKEAISGGSTEAIKEAMAALNQEVMQLGQSLYNQPGAGAAPGPG 679

>gb|AAC03416.1| heat shock protein 70 precursor [Citrullus lanatus]
          Length = 705

 Score =  354 bits (908), Expect(2) = 1e-97
 Identities = 181/231 (78%), Positives = 202/231 (87%)
 Frame = +1

Query: 1    VQAGVLAGEVSDIVLLDVTPLSLGLETLGGVMTKLIPRNTTLPTSKSEVFSTAADGQTSV 180
            VQAGVLAG+VSDIVLLDV+PLSLGLETLGGVMTK+IPRNTTLPTSKSEVFSTAADGQTSV
Sbjct: 441  VQAGVLAGDVSDIVLLDVSPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSV 500

Query: 181  EINVLQGEREFARDNKSLGTFRLDGIPPAPRGVPQIEVKFDIDANGILSVTATDKGTSKK 360
            EINVLQGEREF RDNKSLG+FRLDGIPPAPRGVPQIEVKFDIDANGILSVTA DKGT KK
Sbjct: 501  EINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVTAIDKGTGKK 560

Query: 361  QDIRITGASTLDKGDVERMVKEAEKFAGEDKKRRESVETKNQAETMVYQTEKQLKEFEGK 540
            QDI ITGASTL   +VERMV E  KFA EDK++R++++TKNQA+++VYQTEKQLKE   K
Sbjct: 561  QDITITGASTLPSDEVERMVSERRKFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDK 620

Query: 541  VPADIKAKVEAKLGELKAALPADDAEATKAAMNALQQEVMAMGQAMYSQAG 693
            VP  +K KVE+KLGELK A+     EA K AM AL QEVM +GQ++Y+Q G
Sbjct: 621  VPGPVKEKVESKLGELKEAISGGSTEAIKEAMAALNQEVMQLGQSLYNQPG 671

 Score = 26.9 bits (58), Expect(2) = 1e-97
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +3

Query: 723 SPAAGAGCGWLPPAARS---DDDVIDAEFTDKK 812
           +P AGAG    P  +     + DVIDA+FTD K
Sbjct: 673 APGAGAGSESGPSESTGKGPEGDVIDADFTDSK 705



EST assemble image


clone accession position
1 LC087b02_r AV625045 1 421
2 CM027f03_r AV387633 75 674
3 MX259g12_r BP092836 142 460
4 MX251a02_r BP092199 150 577
5 CM048h02_r AV389094 159 424
6 MXL014f12_r BP093850 161 499
7 MXL018e09_r BP094129 172 589
8 CM034d03_r AV388619 190 551
9 MXL077d11_r BP097538 214 581
10 LC051e05_r AV622578 429 1028
11 LCL084h04_r AV630829 574 1025
12 MX013f05_r BP086646 913 1226
13 MX012d11_r BP086593 913 1356
14 CL44g03_r AV395577 972 1435
15 LC004h05_r AV619184 1051 1567
16 HCL010g06_r AV640122 1060 1335




Chlamydomonas reinhardtii
Kazusa DNA Research Institute