Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000579A_C02 KCC000579A_c02
(2208 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ... 811 0.0
emb|CAA71667.1| Rubisco activase [Chlorococcum littorale] 621 e-176
gb|AAK25798.1|AF338237_1 rubisco activase [Zantedeschia aethiopica] 510 e-143
gb|AAK25801.1|AF338240_1 rubisco activase [Zantedeschia aethiopica] 510 e-143
gb|AAG61121.1|AF329935_1 ribulose-1,5-bisphosphate carboxylase/o... 507 e-142
>sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast
precursor (RuBisCO activase) (RA) gi|320539|pir||A45507
ribulose-bisphosphate carboxylase activase (EC 6.3.4.-)
precursor - Chlamydomonas reinhardtii
gi|167434|gb|AAA33091.1| ribulose 1,5-bisphosphate
carboxylase/oxygenase activase gi|227783|prf||1710353A
RuBisCO activase
Length = 408
Score = 811 bits (2094), Expect = 0.0
Identities = 407/408 (99%), Positives = 407/408 (99%)
Frame = +3
Query: 54 MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 233
MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVA SRKQMGRWRSIDAGVDASDDQQDIT
Sbjct: 1 MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVAPSRKQMGRWRSIDAGVDASDDQQDIT 60
Query: 234 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 413
RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK
Sbjct: 61 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 120
Query: 414 NFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIR 593
NFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIR
Sbjct: 121 NFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIR 180
Query: 594 TRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLP 773
TRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLP
Sbjct: 181 TRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLP 240
Query: 774 GVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQR 953
GVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQR
Sbjct: 241 GVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQR 300
Query: 954 REVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQKVAMPKVSM 1133
REVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQKVAMPKVSM
Sbjct: 301 REVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQKVAMPKVSM 360
Query: 1134 DLNVLIKYGKSLVDEQENVKRVQLADAYLSGAELAGHGGSSLPEAYSR 1277
DLNVLIKYGKSLVDEQENVKRVQLADAYLSGAELAGHGGSSLPEAYSR
Sbjct: 361 DLNVLIKYGKSLVDEQENVKRVQLADAYLSGAELAGHGGSSLPEAYSR 408
>emb|CAA71667.1| Rubisco activase [Chlorococcum littorale]
Length = 403
Score = 621 bits (1601), Expect = e-176
Identities = 310/409 (75%), Positives = 353/409 (85%), Gaps = 1/409 (0%)
Frame = +3
Query: 54 MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 233
MQ+ MK++A + GA+ A ++VR + +S+ Q GRW +IDAG D SDDQQDIT
Sbjct: 1 MQMQMKNTAF---KATGAKTAPKAVR---VPACKASKSQAGRWAAIDAGNDMSDDQQDIT 54
Query: 234 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 413
RGR+MVD LFQG GGTH+AVLSS++YLS + +FNN+EDGFYISPAFLDKMTIH+AK
Sbjct: 55 RGRDMVDSLFQGPGSGGGTHSAVLSSEDYLSTASRNFNNVEDGFYISPAFLDKMTIHVAK 114
Query: 414 NFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIR 593
NFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGI+PIVMSAGELESGNAGEPAKLIR
Sbjct: 115 NFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGISPIVMSAGELESGNAGEPAKLIR 174
Query: 594 TRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLP 773
RYREASD +KKG+MCSLFINDLDAGAGRMG TQYTVNNQMVNATLMNIADNPTNVQLP
Sbjct: 175 QRYREASDSVKKGKMCSLFINDLDAGAGRMGMGTQYTVNNQMVNATLMNIADNPTNVQLP 234
Query: 774 GVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQR 953
GVYK +IPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNV R
Sbjct: 235 GVYKEVQIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVNR 294
Query: 954 REVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVS 1130
EVE LVD FPGQSIDFFGALRARVYDD VR+++ +TGV+ + ++L+N+R+ KV K S
Sbjct: 295 GEVEVLVDAFPGQSIDFFGALRARVYDDKVREFVKNTGVENLSKRLINSREGKVVFEKPS 354
Query: 1131 MDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAELAGHGGSSLPEAYSR 1277
M+L++L+KYGK L +EQENVKRVQLA+ Y+ GA LAG G+SLPE Y+R
Sbjct: 355 MNLDILMKYGKFLTNEQENVKRVQLAEEYMMGASLAGDHGTSLPENYTR 403
>gb|AAK25798.1|AF338237_1 rubisco activase [Zantedeschia aethiopica]
Length = 436
Score = 510 bits (1314), Expect = e-143
Identities = 258/385 (67%), Positives = 304/385 (78%), Gaps = 5/385 (1%)
Frame = +3
Query: 96 VGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGF 275
+G R +T +++ + S + + RW + D SDDQQDITRG+ MVD LFQ
Sbjct: 5 LGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYT--DTSDDQQDITRGKGMVDSLFQAPM 62
Query: 276 GAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPL 449
G GTHN VLSS EY+S SFN N +G YI+PAF+DK+ +HI KNFM+LP IK+PL
Sbjct: 63 G-DGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPL 121
Query: 450 ILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKK 629
ILGIWGGKGQGK+FQC L + K+GI PI+MSAGELESGNAGEPAKLIR RYREA+DII+K
Sbjct: 122 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRK 181
Query: 630 GRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVP 809
G+MC LFINDLDAGAGRMG TTQYTVNNQMVNATLMNIADNPTNVQLPG+Y +E PRVP
Sbjct: 182 GKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENPRVP 241
Query: 810 IVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPG 989
I+ TGNDFSTLYAPLIRDGRMEK+YW PTR+DR+GVC GIF+ DNV + +V LVDTFPG
Sbjct: 242 IIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCTGIFRSDNVPKEDVIKLVDTFPG 301
Query: 990 QSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ---KVAMPKVSMDLNVLIKYG 1160
QSIDFFGALRARVYDD VR+WI + GVD +G++LVN+ + A PK+++D L++YG
Sbjct: 302 QSIDFFGALRARVYDDEVRKWIAEIGVDGVGKRLVNSLEGPPTFAQPKMTLD--KLLEYG 359
Query: 1161 KSLVDEQENVKRVQLADAYLSGAEL 1235
LV EQENVKRVQLAD YLS A L
Sbjct: 360 NMLVQEQENVKRVQLADKYLSEAAL 384
>gb|AAK25801.1|AF338240_1 rubisco activase [Zantedeschia aethiopica]
Length = 435
Score = 510 bits (1314), Expect = e-143
Identities = 258/385 (67%), Positives = 304/385 (78%), Gaps = 5/385 (1%)
Frame = +3
Query: 96 VGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGF 275
+G R +T +++ + S + + RW + D SDDQQDITRG+ MVD LFQ
Sbjct: 41 LGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYT--DTSDDQQDITRGKGMVDSLFQAPM 98
Query: 276 GAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPL 449
G GTHN VLSS EY+S SFN N +G YI+PAF+DK+ +HI KNFM+LP IK+PL
Sbjct: 99 G-DGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPL 157
Query: 450 ILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKK 629
ILGIWGGKGQGK+FQC L + K+GI PI+MSAGELESGNAGEPAKLIR RYREA+DII+K
Sbjct: 158 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRK 217
Query: 630 GRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVP 809
G+MC LFINDLDAGAGRMG TTQYTVNNQMVNATLMNIADNPTNVQLPG+Y +E PRVP
Sbjct: 218 GKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENPRVP 277
Query: 810 IVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPG 989
I+ TGNDFSTLYAPLIRDGRMEK+YW PTR+DR+GVC GIF+ DNV + +V LVDTFPG
Sbjct: 278 IIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCTGIFRSDNVPKEDVIKLVDTFPG 337
Query: 990 QSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ---KVAMPKVSMDLNVLIKYG 1160
QSIDFFGALRARVYDD VR+WI + GVD +G++LVN+ + A PK+++D L++YG
Sbjct: 338 QSIDFFGALRARVYDDEVRKWIAEIGVDGVGKRLVNSLEGPPTFAQPKMTLD--KLLEYG 395
Query: 1161 KSLVDEQENVKRVQLADAYLSGAEL 1235
LV EQENVKRVQLAD YLS A L
Sbjct: 396 NMLVQEQENVKRVQLADKYLSEAAL 420
>gb|AAG61121.1|AF329935_1 ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 [Gossypium
hirsutum]
Length = 435
Score = 507 bits (1306), Expect = e-142
Identities = 254/373 (68%), Positives = 299/373 (80%), Gaps = 3/373 (0%)
Frame = +3
Query: 126 VRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVL 305
V A+ ++ ++ + RW+ + D SDDQQDITRG+ MVD LFQ GTH AV+
Sbjct: 14 VMAAEKEIDEETQTEKDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVM 70
Query: 306 SSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQ 479
SS EY+SQ ++N N DGFYI+PAF+DK+ +HI+KNFM LP IKVPLILGIWGGKGQ
Sbjct: 71 SSYEYISQGLKTYNLDNNMDGFYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIWGGKGQ 130
Query: 480 GKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFIND 659
GK+FQC L + K+GI PI+MSAGELESGNAGEPAKLIR RYREA+DIIKKG+MC+LFIND
Sbjct: 131 GKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCALFIND 190
Query: 660 LDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFST 839
LDAGAGRMG TTQYTVNNQMVNATLMNIADNPTNVQLPG+Y EE PRVPI+ TGNDFST
Sbjct: 191 LDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFST 250
Query: 840 LYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALR 1019
LYAPLIRDGRMEK+YW PTR+DRIGVC GIF+ D V+ ++ LVDTFPGQSIDFFGALR
Sbjct: 251 LYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFRTDGVRDEDIVKLVDTFPGQSIDFFGALR 310
Query: 1020 ARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKR 1196
ARVYDD VR+WI++ GV +G++LVN+R+ + M + L++YG LV EQENVKR
Sbjct: 311 ARVYDDEVRKWISEVGVASVGKKLVNSREGPPTFEQPKMTIEKLLEYGNMLVAEQENVKR 370
Query: 1197 VQLADAYLSGAEL 1235
VQLAD YLS A L
Sbjct: 371 VQLADKYLSEAAL 383
