KCC000572A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000572A_C02 KCC000572A_c02
GAAGCCCACACCCAGCAACCATGCAGACCGTGCGTGCTCCCGCCGCCTCCGGCGTTGCCA
CCCGCGTGGCTGGCCGCCGCATGTGCCGCCCCGTGGCGGCCACCAAGGCTTCGACCGCGG
TGACCACCGATATGTCCAAGCGCACCGTGCCCACCAAGCTGGAGGAGGGTGAGATGCCCC
TGAACACCTACTCGAACAAGGCTCCCTTCAAGGCCAAGGTTCGCTCGGTGGAGAAGATCA
CCGGCCCCAAGGCCACTGGTGAGACTTGCCACATCATCATCGAGACCGAGGGCAAGATCC
CCTTCTGGGAGGGCCAGTCCTACGGTGTGATCCCCCCGGGCACCAAGATCAACTCCAAGG
GCAAGGAGGTGCCCCACGGCACCCGCCTCTACTCCATCGCCTCGTCCCGCTACGGCGATG
ACTTCGACGGCCAGACCGCCTCGCTGTGCGTGCGCCGCGCCGTGTACGTGGACCCCGAGA
CCGGCAAGGAGGACCCCGCCAAGAAGGGCCTGTGCTCCAACTTCCTGTGCGACGCCACCC
CCGGCACCGAGATCTCGATGACCGGCCCCACCGGCAAGGTGCTGCTGCTGCCCGCTGACG
CCAACGCCCCTCTGATCTGCGTGGCCACCGGCACCGGCATTGCCCCCTTCCGCTCCTTCT
GGCGCCGCTGCTTCATTGAGAACGTGCCCAGCTACAAGTTCACCGGCCTGTTCTGGCTGT
TCATGGGCGTGGCCAACAGCGACGCCAAGCTGTACGACGAGGAGCTGCAGGCCATCGCCA
AGGCCTACCCCGGCCAGTTCCGCCTGGACTACGCCCTGTCGCGCGAGCAGAACAACCGCA
AGGGCGGCAAGATGTACATCCAGGACAAGGTGGAGGAGTACGCCGACGAGATCTTCGACC
TGCTGGACAACGGCGCGCACATGTACTTCTGCGGCCTGAAGGGCATGATGCCCTGGCATC
CAGGACATGCTTGAGCGCGTGGCCAAGGCAGAAGGGCCTGAACTACGAGGAGTGGGTTGA
GGGCCTGAAGCACAAGAACCAGTGGCACGTGGAGGTCTACTAAGCGGCCTGCGCTCTGCC
CTCTCCCGCACACGTCGAGTGGGCGGGAGCGAGTTGTGTAGCGGTGGCGGCTTGGTAGCA
GCACGGCCACGGCGTGCTCCTTGAGCGGGCTCGAGCGTAACAGCGGCGAAAGCAGCAGCG
AGGAGCTTCTGCTCTCTCGGACGAGGCAAGGGGGCGCTGGCGGTGGCGGGACGAGAACGC
GGCGGGCAGCGGGCCGGGCGGGCGGCATGCCTCGCCGGAAAGCAAAGGCGCCGCGCGCCG
GCCGCGGCACTAGCATGTCTGGAGCAGTCTAGTTGCCTCGCTGGCGTTGATGTCTAGAGC
CCGGAAGGTCCGTTCCGAATACCTGCGCTGCGCGAGAGCGCGTGTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000572A_C02 KCC000572A_c02
         (1426 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P53991|FENR_CHLRE Ferredoxin--NADP reductase, chloroplast pre...   600  0.0
pir||S72222 ferredoxin-NADP reductase (EC 1.18.1.2) precursor - ...   603  0.0
emb|CAA55406.1| ferredoxin NADP reductase [Chlamydomonas reinhar...   461  e-141
ref|NP_567293.1| ferredoxin--NADP(+) reductase (adrenodoxin redu...   374  e-104
pir||G85067 ferredoxin-NADP+ reductase-like protein [imported] -...   374  e-104

>sp|P53991|FENR_CHLRE Ferredoxin--NADP reductase, chloroplast precursor (FNR)
           gi|7433375|pir||T08035 ferredoxin-NADP reductase (EC
           1.18.1.2) precursor - Chlamydomonas reinhardtii
           gi|619662|gb|AAA79131.1| ferredoxin-NADP+ reductase
          Length = 354

 Score =  600 bits (1546), Expect(4) = 0.0
 Identities = 295/300 (98%), Positives = 295/300 (98%)
 Frame = +3

Query: 54  VATRVAGRRMCRPVAATKASTAVTTDMSKRTVPTKLEEGEMPLNTYSNKAPFKAKVRSVE 233
           VATRVAGRRMCRPVAATKASTAVTTDMSKRTVPTKLEEGEMPLNTYSNKAPFKAKVRSVE
Sbjct: 21  VATRVAGRRMCRPVAATKASTAVTTDMSKRTVPTKLEEGEMPLNTYSNKAPFKAKVRSVE 80

Query: 234 KITGPKATGETCHIIIETEGKIPFWEGQSYGVIPPGTKINSKGKEVPHGTRLYSIASSRY 413
           KITGPKATGETCHIIIETEGKIPFWEGQSYGVIPPGTKINSKGKEVP   RLYSIASSRY
Sbjct: 81  KITGPKATGETCHIIIETEGKIPFWEGQSYGVIPPGTKINSKGKEVPTA-RLYSIASSRY 139

Query: 414 GDDFDGQTASLCVRRAVYVDPETGKEDPAKKGLCSNFLCDATPGTEISMTGPTGKVLLLP 593
           GDD DGQTASLCVRRAVYVDPETGKEDPAKKGLCSNFLCDATPGTEISMTGPTGKVLLLP
Sbjct: 140 GDDGDGQTASLCVRRAVYVDPETGKEDPAKKGLCSNFLCDATPGTEISMTGPTGKVLLLP 199

Query: 594 ADANAPLICVATGTGIAPFRSFWRRCFIENVPSYKFTGLFWLFMGVANSDAKLYDEELQA 773
           ADANAPLICVATGTGIAPFRSFWRRCFIENVPSYKFTGLFWLFMGV NSDAKLYDEELQA
Sbjct: 200 ADANAPLICVATGTGIAPFRSFWRRCFIENVPSYKFTGLFWLFMGVGNSDAKLYDEELQA 259

Query: 774 IAKAYPGQFRLDYALSREQNNRKGGKMYIQDKVEEYADEIFDLLDNGAHMYFCGLKGMMP 953
           IAKAYPGQFRLDYALSREQNNRKGGKMYIQDKVEEYADEIFDLLDNGAHMYFCGLKGMMP
Sbjct: 260 IAKAYPGQFRLDYALSREQNNRKGGKMYIQDKVEEYADEIFDLLDNGAHMYFCGLKGMMP 319

 Score = 58.5 bits (140), Expect(4) = 0.0
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = +2

Query: 986  RQKGLNYEEWVEGLKHKNQWHVEVY 1060
            ++KGLNYEEWVEGLKHKNQWHVEVY
Sbjct: 330  KEKGLNYEEWVEGLKHKNQWHVEVY 354

 Score = 33.9 bits (76), Expect(4) = 0.0
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +2

Query: 11 PSNHADRACSRRLR 52
          PSNHADRACSRRLR
Sbjct: 7  PSNHADRACSRRLR 20

 Score = 30.0 bits (66), Expect(4) = 0.0
 Identities = 13/15 (86%), Positives = 14/15 (92%)
 Frame = +1

Query: 952 PGIQDMLERVAKAEG 996
           PGIQDMLERVAK +G
Sbjct: 319 PGIQDMLERVAKEKG 333

>pir||S72222 ferredoxin-NADP reductase (EC 1.18.1.2) precursor - Volvox carteri
           gi|732532|gb|AAB40978.1| ferredoxin-NADP+ reductase
          Length = 346

 Score =  603 bits (1554), Expect(3) = 0.0
 Identities = 290/311 (93%), Positives = 301/311 (96%)
 Frame = +3

Query: 21  MQTVRAPAASGVATRVAGRRMCRPVAATKASTAVTTDMSKRTVPTKLEEGEMPLNTYSNK 200
           MQT+RAPAA G ATRVA RR+ RPVA+TK STAVTTD+SKRTVPT LEEGEMPLNTYSNK
Sbjct: 1   MQTMRAPAAQGAATRVASRRVFRPVASTKVSTAVTTDVSKRTVPTALEEGEMPLNTYSNK 60

Query: 201 APFKAKVRSVEKITGPKATGETCHIIIETEGKIPFWEGQSYGVIPPGTKINSKGKEVPHG 380
           APFKAK+RSVE ITGPKATGETCHIIIETEGKIPFWEGQSYGVIPPGTKINSKGKEVPHG
Sbjct: 61  APFKAKIRSVETITGPKATGETCHIIIETEGKIPFWEGQSYGVIPPGTKINSKGKEVPHG 120

Query: 381 TRLYSIASSRYGDDFDGQTASLCVRRAVYVDPETGKEDPAKKGLCSNFLCDATPGTEISM 560
           TRLYSIASSRYGDDFDG+TASLCVRRAVYVDPETGKEDPAKKG+CSN+LCDATPGTEI M
Sbjct: 121 TRLYSIASSRYGDDFDGKTASLCVRRAVYVDPETGKEDPAKKGICSNYLCDATPGTEIVM 180

Query: 561 TGPTGKVLLLPADANAPLICVATGTGIAPFRSFWRRCFIENVPSYKFTGLFWLFMGVANS 740
           TGPTGKVLLLPADANAPLICVATGTGIAPFRSFWRRCF+ENVPSYKFTGLFWLFMGVANS
Sbjct: 181 TGPTGKVLLLPADANAPLICVATGTGIAPFRSFWRRCFMENVPSYKFTGLFWLFMGVANS 240

Query: 741 DAKLYDEELQAIAKAYPGQFRLDYALSREQNNRKGGKMYIQDKVEEYADEIFDLLDNGAH 920
           DAKLYDEELQA+AKAYP QFRLDYALSREQ NRKGGKMYIQDKVEEY+DEIFDLLDNGAH
Sbjct: 241 DAKLYDEELQALAKAYPSQFRLDYALSREQKNRKGGKMYIQDKVEEYSDEIFDLLDNGAH 300

Query: 921 MYFCGLKGMMP 953
           MYFCGLKGMMP
Sbjct: 301 MYFCGLKGMMP 311

 Score = 56.6 bits (135), Expect(3) = 0.0
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +2

Query: 986  RQKGLNYEEWVEGLKHKNQWHVEVY 1060
            + KGLNYEEWVEGLKH+NQWHVEVY
Sbjct: 322  KSKGLNYEEWVEGLKHRNQWHVEVY 346

 Score = 29.3 bits (64), Expect(3) = 0.0
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +1

Query: 952 PGIQDMLERVAKAEG 996
           PGIQ+MLERVAK++G
Sbjct: 311 PGIQEMLERVAKSKG 325

>emb|CAA55406.1| ferredoxin NADP reductase [Chlamydomonas reinhardtii]
          Length = 255

 Score =  461 bits (1186), Expect(3) = e-141
 Identities = 220/220 (100%), Positives = 220/220 (100%)
 Frame = +3

Query: 294 KIPFWEGQSYGVIPPGTKINSKGKEVPHGTRLYSIASSRYGDDFDGQTASLCVRRAVYVD 473
           KIPFWEGQSYGVIPPGTKINSKGKEVPHGTRLYSIASSRYGDDFDGQTASLCVRRAVYVD
Sbjct: 1   KIPFWEGQSYGVIPPGTKINSKGKEVPHGTRLYSIASSRYGDDFDGQTASLCVRRAVYVD 60

Query: 474 PETGKEDPAKKGLCSNFLCDATPGTEISMTGPTGKVLLLPADANAPLICVATGTGIAPFR 653
           PETGKEDPAKKGLCSNFLCDATPGTEISMTGPTGKVLLLPADANAPLICVATGTGIAPFR
Sbjct: 61  PETGKEDPAKKGLCSNFLCDATPGTEISMTGPTGKVLLLPADANAPLICVATGTGIAPFR 120

Query: 654 SFWRRCFIENVPSYKFTGLFWLFMGVANSDAKLYDEELQAIAKAYPGQFRLDYALSREQN 833
           SFWRRCFIENVPSYKFTGLFWLFMGVANSDAKLYDEELQAIAKAYPGQFRLDYALSREQN
Sbjct: 121 SFWRRCFIENVPSYKFTGLFWLFMGVANSDAKLYDEELQAIAKAYPGQFRLDYALSREQN 180

Query: 834 NRKGGKMYIQDKVEEYADEIFDLLDNGAHMYFCGLKGMMP 953
           NRKGGKMYIQDKVEEYADEIFDLLDNGAHMYFCGLKGMMP
Sbjct: 181 NRKGGKMYIQDKVEEYADEIFDLLDNGAHMYFCGLKGMMP 220

 Score = 58.5 bits (140), Expect(3) = e-141
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = +2

Query: 986  RQKGLNYEEWVEGLKHKNQWHVEVY 1060
            ++KGLNYEEWVEGLKHKNQWHVEVY
Sbjct: 231  KEKGLNYEEWVEGLKHKNQWHVEVY 255

 Score = 30.0 bits (66), Expect(3) = e-141
 Identities = 13/15 (86%), Positives = 14/15 (92%)
 Frame = +1

Query: 952 PGIQDMLERVAKAEG 996
           PGIQDMLERVAK +G
Sbjct: 220 PGIQDMLERVAKEKG 234

>ref|NP_567293.1| ferredoxin--NADP(+) reductase (adrenodoxin reductase), putative
           [Arabidopsis thaliana] gi|18252227|gb|AAL61946.1|
           ferredoxin-NADP+ reductase-like protein [Arabidopsis
           thaliana] gi|21387049|gb|AAM47928.1| ferredoxin-NADP+
           reductase-like protein [Arabidopsis thaliana]
          Length = 378

 Score =  374 bits (959), Expect(3) = e-104
 Identities = 176/270 (65%), Positives = 214/270 (79%), Gaps = 2/270 (0%)
 Frame = +3

Query: 150 PTKLEEG-EMPLNTYSNKAPFKAKVRSVEKITGPKATGETCHIIIETEGKIPFWEGQSYG 326
           P +LE+  E PLN +  K P+ A + SVE+I GP+A GETCHI+I+ +G +P+WEGQSYG
Sbjct: 76  PLELEDPKETPLNLFRPKEPYTATIVSVERIVGPQAPGETCHIVIDHDGNVPYWEGQSYG 135

Query: 327 VIPPGTKINSKGKEVPHGTRLYSIASSRYGDDFDGQTASLCVRRAVYVDPETGKEDPAKK 506
           VIPPG   N K    PH  RLYSIAS+RYGD FDG+TASLCVRRA+Y DPETGKEDP+K 
Sbjct: 136 VIPPGE--NPKKPGAPHNVRLYSIASTRYGDSFDGKTASLCVRRAIYYDPETGKEDPSKA 193

Query: 507 GLCSNFLCDATPGTEISMTGPTGKVLLLPAD-ANAPLICVATGTGIAPFRSFWRRCFIEN 683
           G+CSNFLC+A PG ++ +TGP+GKV+LLP D   A  I +ATGTG+AP+R + RR F+EN
Sbjct: 194 GVCSNFLCNAKPGDKVKITGPSGKVMLLPEDDPKATHIMIATGTGVAPYRGYLRRMFMEN 253

Query: 684 VPSYKFTGLFWLFMGVANSDAKLYDEELQAIAKAYPGQFRLDYALSREQNNRKGGKMYIQ 863
           VP++KF GL WLF+GVANSD+ LYDEE     K YP  FR D ALSRE+ N+KGGKMY+Q
Sbjct: 254 VPNFKFDGLAWLFLGVANSDSLLYDEEFAGYRKDYPENFRYDKALSREEKNKKGGKMYVQ 313

Query: 864 DKVEEYADEIFDLLDNGAHMYFCGLKGMMP 953
           DK+EEY+DEIF LLDNGAH+YFCGLKGMMP
Sbjct: 314 DKIEEYSDEIFKLLDNGAHIYFCGLKGMMP 343

 Score = 28.1 bits (61), Expect(3) = e-104
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 989  QKGLNYEEWVEGLKHKNQWHVEVY 1060
            ++G ++E+ +  L+   QWHVEVY
Sbjct: 355  ERGESWEQKLTQLRKNKQWHVEVY 378

 Score = 24.3 bits (51), Expect(3) = e-104
 Identities = 10/15 (66%), Positives = 12/15 (79%)
 Frame = +1

Query: 952 PGIQDMLERVAKAEG 996
           PGIQD L+RVA+  G
Sbjct: 343 PGIQDTLKRVAEERG 357

>pir||G85067 ferredoxin-NADP+ reductase-like protein [imported] - Arabidopsis
           thaliana gi|7267299|emb|CAB81081.1| ferredoxin--NADP+
           reductase-like protein [Arabidopsis thaliana]
          Length = 360

 Score =  374 bits (959), Expect(3) = e-104
 Identities = 176/270 (65%), Positives = 214/270 (79%), Gaps = 2/270 (0%)
 Frame = +3

Query: 150 PTKLEEG-EMPLNTYSNKAPFKAKVRSVEKITGPKATGETCHIIIETEGKIPFWEGQSYG 326
           P +LE+  E PLN +  K P+ A + SVE+I GP+A GETCHI+I+ +G +P+WEGQSYG
Sbjct: 58  PLELEDPKETPLNLFRPKEPYTATIVSVERIVGPQAPGETCHIVIDHDGNVPYWEGQSYG 117

Query: 327 VIPPGTKINSKGKEVPHGTRLYSIASSRYGDDFDGQTASLCVRRAVYVDPETGKEDPAKK 506
           VIPPG   N K    PH  RLYSIAS+RYGD FDG+TASLCVRRA+Y DPETGKEDP+K 
Sbjct: 118 VIPPGE--NPKKPGAPHNVRLYSIASTRYGDSFDGKTASLCVRRAIYYDPETGKEDPSKA 175

Query: 507 GLCSNFLCDATPGTEISMTGPTGKVLLLPAD-ANAPLICVATGTGIAPFRSFWRRCFIEN 683
           G+CSNFLC+A PG ++ +TGP+GKV+LLP D   A  I +ATGTG+AP+R + RR F+EN
Sbjct: 176 GVCSNFLCNAKPGDKVKITGPSGKVMLLPEDDPKATHIMIATGTGVAPYRGYLRRMFMEN 235

Query: 684 VPSYKFTGLFWLFMGVANSDAKLYDEELQAIAKAYPGQFRLDYALSREQNNRKGGKMYIQ 863
           VP++KF GL WLF+GVANSD+ LYDEE     K YP  FR D ALSRE+ N+KGGKMY+Q
Sbjct: 236 VPNFKFDGLAWLFLGVANSDSLLYDEEFAGYRKDYPENFRYDKALSREEKNKKGGKMYVQ 295

Query: 864 DKVEEYADEIFDLLDNGAHMYFCGLKGMMP 953
           DK+EEY+DEIF LLDNGAH+YFCGLKGMMP
Sbjct: 296 DKIEEYSDEIFKLLDNGAHIYFCGLKGMMP 325

 Score = 28.1 bits (61), Expect(3) = e-104
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 989  QKGLNYEEWVEGLKHKNQWHVEVY 1060
            ++G ++E+ +  L+   QWHVEVY
Sbjct: 337  ERGESWEQKLTQLRKNKQWHVEVY 360

 Score = 24.3 bits (51), Expect(3) = e-104
 Identities = 10/15 (66%), Positives = 12/15 (79%)
 Frame = +1

Query: 952 PGIQDMLERVAKAEG 996
           PGIQD L+RVA+  G
Sbjct: 325 PGIQDTLKRVAEERG 339



EST assemble image


clone accession position
1 HC047c10_r AV635514 1 555
2 MXL064h09_r BP096789 43 443
3 CM008f11_r AV386696 95 569
4 LC033g05_r AV621276 96 508
5 LCL026c03_r AV627402 99 586
6 LCL024a10_r AV627266 101 475
7 MXL067c01_r BP096928 102 487
8 LCL052g09_r AV629134 102 578
9 LC057b06_r AV622965 103 589
10 CM058g01_r AV390393 103 588
11 MXL020e05_r BP094280 104 578
12 MXL019a11_r BP094173 106 578
13 HCL034c08_r AV641475 106 462
14 MXL045f06_r BP095674 108 544
15 MXL097f04_r BP098700 108 482
16 MXL064c11_r BP096756 108 502
17 LCL088b09_r AV631054 108 513
18 MXL016g04_r BP093996 108 571
19 HCL043g10_r AV642006 109 563
20 HCL098h11_r AV645159 110 503
21 HC076g11_r AV637735 110 545
22 MX227c11_r BP090673 110 424
23 HCL060b09_r AV642902 110 641
24 MXL050h04_r BP096003 110 498
25 MXL057b03_r BP096343 112 481
26 HCL027h06_r AV641108 112 588
27 MXL032e06_r BP094920 119 523
28 MX251g05_r BP092260 137 580
29 MXL043a03_r BP095514 182 589
30 CM089b04_r AV392220 185 757
31 MXL037f02_r BP095190 286 686
32 HC089d02_r AV638679 359 777
33 LCL004a01_r AV626191 445 758
34 CM019g06_r AV387334 450 1057
35 HCL016h02_r AV640469 609 835
36 CL43d04_r AV395555 677 1138
37 LC011g06_r AV619687 849 1393
38 MX251f06_r BP092252 854 1138
39 HC042b08_r AV635122 902 1420
40 MXL008c10_r BP093431 914 1234
41 HCL046g10_r AV642171 1073 1524
42 MXL004b12_r BP093152 1100 1546
43 CM091b02_r AV397565 1187 1487




Chlamydomonas reinhardtii
Kazusa DNA Research Institute