Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000571A_C01 KCC000571A_c01
(493 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH45038.1| Similar to ribosome binding protein 1 [Xenopus la... 37 0.13
gb|AAH59298.1| Unknown (protein for MGC:68897) [Xenopus laevis] 37 0.13
ref|NP_176576.1| hypothetical protein [Arabidopsis thaliana] gi|... 35 0.38
ref|XP_110500.1| similar to ATP-dependent chromatin remodeling p... 35 0.65
ref|XP_284045.1| similar to ATP-dependent chromatin remodeling p... 35 0.65
>gb|AAH45038.1| Similar to ribosome binding protein 1 [Xenopus laevis]
Length = 733
Score = 37.0 bits (84), Expect = 0.13
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 282 VPLAVATLPLAAPGTRQHLQGLCKPLISPSGAAPLVQKGRPSVQESRKRPQ 130
VP+ V +P+ AP ++ G K ++P AAP QK P+ Q++ PQ
Sbjct: 106 VPVEVPIVPVVAPVPKKSASGSEKAALAPQKAAPAPQKAAPAPQKAAPAPQ 156
>gb|AAH59298.1| Unknown (protein for MGC:68897) [Xenopus laevis]
Length = 1055
Score = 37.0 bits (84), Expect = 0.13
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 282 VPLAVATLPLAAPGTRQHLQGLCKPLISPSGAAPLVQKGRPSVQESRKRPQ 130
VP+ V +P+ AP ++ G K ++P AAP QK P+ Q++ PQ
Sbjct: 117 VPVEVPIVPVVAPVPKKSASGSEKAALAPQKAAPAPQKAAPAPQKAAPAPQ 167
>ref|NP_176576.1| hypothetical protein [Arabidopsis thaliana] gi|25354334|pir||D96664
hypothetical protein T12P18.5 [imported] - Arabidopsis
thaliana gi|12325015|gb|AAG52457.1|AC010852_14
hypothetical protein; 12785-11538 [Arabidopsis thaliana]
Length = 415
Score = 35.4 bits (80), Expect = 0.38
Identities = 28/88 (31%), Positives = 37/88 (41%), Gaps = 4/88 (4%)
Frame = -1
Query: 385 AITATPLSGEIVAANHTSGGNSLVSLML----NTFGGSGAFGGGNVAASRSWNSPTSPRT 218
A+ PL V + N +V+L L N GG G GGGN RSW
Sbjct: 151 ALEQRPLGDGNVRRAKRALANLVVALSLEDKENVSGGGGGGGGGNKTTERSW-------- 202
Query: 217 L*AFNFAFGGSPAGSEGPTIRPRVKEAS 134
+F GGS A S+G ++K +S
Sbjct: 203 --SFGRRSGGSSAASKGGATIGQLKSSS 228
>ref|XP_110500.1| similar to ATP-dependent chromatin remodeling protein SNF2H [Mus
musculus]
Length = 498
Score = 34.7 bits (78), Expect = 0.65
Identities = 20/49 (40%), Positives = 25/49 (50%), Gaps = 1/49 (2%)
Frame = +3
Query: 189 PPKAKLKAYKVLGDVGEFQERLAATLPP-PKAPEPPNVFNISDTSEFPP 332
PPK + KA + F+E L + P PKAP PP N+ D FPP
Sbjct: 419 PPKRERKANYAVD--AYFREALRVSEPKAPKAPRPPKQLNVQDFQFFPP 465
>ref|XP_284045.1| similar to ATP-dependent chromatin remodeling protein SNF2H [Mus
musculus]
Length = 327
Score = 34.7 bits (78), Expect = 0.65
Identities = 20/49 (40%), Positives = 25/49 (50%), Gaps = 1/49 (2%)
Frame = +3
Query: 189 PPKAKLKAYKVLGDVGEFQERLAATLPP-PKAPEPPNVFNISDTSEFPP 332
PPK + KA + F+E L + P PKAP PP N+ D FPP
Sbjct: 248 PPKRERKANYAVD--AYFREALRVSEPKAPKAPRPPKQLNVQDFQFFPP 294
