KCC000567A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000567A_C01 KCC000567A_c01
tcaacATCATCTAGGCCTCCTCAGGCGCGCGTTGAGTTGTCTCAGTGGGGGTTCAGTGCT
GCTCCGTGCTATATGAGCTTGGGCTTCCGCCTTTGGCAGAACCTTCTTCCAACGATGAAC
CGCTCTCTTGCTCCGTCGAAGGCCCAGTGCCTGCGGCGATGCGGCGCTGCCAACATTGCG
CGGACGCGCCTGCACACGATCGCTGCTGCTGCGGCGCCCGTCGCTGGCGAGCGCAGGGCC
AAGGCTAACATTGACTGGGACAGCCTGGGCTTCGGCCTGAAGGACGTTGCTGCGACCATG
TATGTGGCGGAGTGGACGCCGGAGAAGGGCTGGGACAGCGGCAAGCTGGTGCCCTACGGC
CCCCTCAACATGATGCCCAGCGCGCAGGTGCTCAACTACGGCCAGGCCATCTTCGAGGGC
ATGAAGGCCCAGGAGTCCGCCAAGGGCCGGGTGGTGCTGTTCCGCCCCGACCAGAACGCG
GCCCGCTTCAAGGCGGGCGCGGCGCGCATGTCCATGCCGTCGGTGCCCGAGGACCAGTTC
GTGGAGGCGGTGCGTGCCACCGTGGAGAACAACCTAGACTACGTTCCCCCCATGGGCAAG
GGCTCCCTCTACCTGCGCCCGCTGCTGATGGGCACCGGACCCATCCTGGGCCTGGGCCCG
GCGCCCGCCTACACCTTTGCCATCTTCGCCGCCGCCGTGGGGGCCTACTTCAAGGGCGGC
CAGCTGACCCCCATTGACCTCATCGTGGAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000567A_C01 KCC000567A_c01
         (750 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAN60486.1| Putative aminotransferase [Oryza sativa (japonica...   191  1e-47
ref|NP_172478.1| tat-binding protein -related [Arabidopsis thali...   186  3e-46
gb|AAF07192.1|AF193846_1 branched-chain amino acid aminotransfer...   181  8e-45
ref|NP_201379.1| branched-chain amino acid aminotransferase [Ara...   180  2e-44
sp|Q9FYA6|BCA5_ARATH Branched-chain amino acid aminotransferase ...   180  2e-44

>gb|AAN60486.1| Putative aminotransferase [Oryza sativa (japonica cultivar-group)]
          Length = 405

 Score =  191 bits (485), Expect = 1e-47
 Identities = 101/205 (49%), Positives = 135/205 (65%)
 Frame = +1

Query: 136 SKAQCLRRCGAANIARTRLHTIAAAAAPVAGERRAKANIDWDSLGFGLKDVAATMYVAEW 315
           SKA C   C  A++A   + T A A            ++DW++LGFGL      MY+A+ 
Sbjct: 46  SKAHCAIGC-QASLATNYMETSAVA------------DLDWENLGFGLVQTDF-MYIAKC 91

Query: 316 TPEKGWDSGKLVPYGPLNMMPSAQVLNYGQAIFEGMKAQESAKGRVVLFRPDQNAARFKA 495
            P+  +  G++VP+GP+ + PSA VLNYGQ +FEG+KA     G ++LFRP++NA R + 
Sbjct: 92  GPDGNFSKGEMVPFGPIELSPSAGVLNYGQGLFEGLKAYRKTDGYILLFRPEENAIRMRN 151

Query: 496 GAARMSMPSVPEDQFVEAVRATVENNLDYVPPMGKGSLYLRPLLMGTGPILGLGPAPAYT 675
           GA RM MP+   +QFV+AV+ TV  N  +VPP GKGSLY+RPLLMG+G +LGL PAP YT
Sbjct: 152 GAERMCMPAPTLEQFVDAVKQTVLANKRWVPPTGKGSLYIRPLLMGSGAVLGLAPAPEYT 211

Query: 676 FAIFAAAVGAYFKGGQLTPIDLIVE 750
           F IF + VG YFK G L PI+LI+E
Sbjct: 212 FMIFVSPVGNYFKEG-LAPINLIIE 235

>ref|NP_172478.1| tat-binding protein -related [Arabidopsis thaliana]
           gi|26391680|sp|Q9M439|BCA2_ARATH Branched-chain amino
           acid aminotransferase 2, chloroplast precursor
           (Atbcat-2) gi|8249004|emb|CAB93128.1| branched-chain
           amino acid transaminase [Arabidopsis thaliana]
           gi|13877745|gb|AAK43950.1|AF370135_1 putative
           tat-binding protein [Arabidopsis thaliana]
           gi|15293209|gb|AAK93715.1| putative tat-binding protein
           [Arabidopsis thaliana]
          Length = 388

 Score =  186 bits (472), Expect = 3e-46
 Identities = 95/169 (56%), Positives = 120/169 (70%)
 Frame = +1

Query: 244 ANIDWDSLGFGLKDVAATMYVAEWTPEKGWDSGKLVPYGPLNMMPSAQVLNYGQAIFEGM 423
           A++DWD+LGFGL   A  MYV + + +  +  G+L PYG + + PSA VLNYGQAI+EG 
Sbjct: 54  ADLDWDNLGFGLNP-ADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGT 112

Query: 424 KAQESAKGRVVLFRPDQNAARFKAGAARMSMPSVPEDQFVEAVRATVENNLDYVPPMGKG 603
           KA     G+++LFRPD NA R K GA RM MPS   DQFV AV+ T   N  +VPP GKG
Sbjct: 113 KAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKG 172

Query: 604 SLYLRPLLMGTGPILGLGPAPAYTFAIFAAAVGAYFKGGQLTPIDLIVE 750
           +LY+RPLLMG+GPILGLGPAP YTF ++A+ VG YFK G +  ++L VE
Sbjct: 173 TLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEG-MAALNLYVE 220

>gb|AAF07192.1|AF193846_1 branched-chain amino acid aminotransferase [Solanum tuberosum]
          Length = 377

 Score =  181 bits (460), Expect = 8e-45
 Identities = 94/184 (51%), Positives = 126/184 (68%)
 Frame = +1

Query: 199 IAAAAAPVAGERRAKANIDWDSLGFGLKDVAATMYVAEWTPEKGWDSGKLVPYGPLNMMP 378
           +A+ A+ VA E    A+IDWD+LGFG       MY  + +  + +  G+L  +G + + P
Sbjct: 30  VASPASDVASEL---ADIDWDNLGFGFMPTDY-MYSMKCSQGENFSKGELQRFGNIELSP 85

Query: 379 SAQVLNYGQAIFEGMKAQESAKGRVVLFRPDQNAARFKAGAARMSMPSVPEDQFVEAVRA 558
           SA +LNYGQ +FEG+KA     G ++LFRP++NA R K GA RM MPS   +QFVEAV+A
Sbjct: 86  SAGILNYGQGLFEGLKAYRKHDGNILLFRPEENATRLKMGAERMCMPSPSVEQFVEAVKA 145

Query: 559 TVENNLDYVPPMGKGSLYLRPLLMGTGPILGLGPAPAYTFAIFAAAVGAYFKGGQLTPID 738
           TV  N  ++PP GKGSLY+RPLLMG+G +LGL PAP YTF I+ + VG YFK G L PI+
Sbjct: 146 TVLANERWIPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG-LAPIN 204

Query: 739 LIVE 750
           L++E
Sbjct: 205 LVIE 208

>ref|NP_201379.1| branched-chain amino acid aminotransferase [Arabidopsis thaliana]
           gi|10177336|dbj|BAB10685.1| branched-chain amino acid
           aminotransferase [Arabidopsis thaliana]
          Length = 401

 Score =  180 bits (456), Expect = 2e-44
 Identities = 91/169 (53%), Positives = 118/169 (68%)
 Frame = +1

Query: 244 ANIDWDSLGFGLKDVAATMYVAEWTPEKGWDSGKLVPYGPLNMMPSAQVLNYGQAIFEGM 423
           A IDWD + FGLK     MY  + + +  +  G+L P+G +++ P+A VLNYGQ +FEG+
Sbjct: 69  AEIDWDKIDFGLKPTDY-MYAMKCSRDGEFSQGQLQPFGNIDINPAAGVLNYGQGLFEGL 127

Query: 424 KAQESAKGRVVLFRPDQNAARFKAGAARMSMPSVPEDQFVEAVRATVENNLDYVPPMGKG 603
           KA     G ++LFRP++NA R + GA RM MPS   +QFVEAV+ TV  N  ++PP GKG
Sbjct: 128 KAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTVLANKRWIPPPGKG 187

Query: 604 SLYLRPLLMGTGPILGLGPAPAYTFAIFAAAVGAYFKGGQLTPIDLIVE 750
           SLY+RPLLMGTG +LGL PAP YTF IF + VG YFK G + PI+LIVE
Sbjct: 188 SLYIRPLLMGTGAVLGLAPAPEYTFLIFVSPVGNYFKEG-VAPINLIVE 235

>sp|Q9FYA6|BCA5_ARATH Branched-chain amino acid aminotransferase 5, chloroplast precursor
           (Atbcat-5) gi|9843665|emb|CAC03680.1| branched-chain
           amino acid transaminase 5 [Arabidopsis thaliana]
          Length = 415

 Score =  180 bits (456), Expect = 2e-44
 Identities = 91/169 (53%), Positives = 118/169 (68%)
 Frame = +1

Query: 244 ANIDWDSLGFGLKDVAATMYVAEWTPEKGWDSGKLVPYGPLNMMPSAQVLNYGQAIFEGM 423
           A IDWD + FGLK     MY  + + +  +  G+L P+G +++ P+A VLNYGQ +FEG+
Sbjct: 80  AEIDWDKIDFGLKPTDY-MYAMKCSRDGEFSQGQLQPFGNIDINPAAGVLNYGQGLFEGL 138

Query: 424 KAQESAKGRVVLFRPDQNAARFKAGAARMSMPSVPEDQFVEAVRATVENNLDYVPPMGKG 603
           KA     G ++LFRP++NA R + GA RM MPS   +QFVEAV+ TV  N  ++PP GKG
Sbjct: 139 KAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTVLANKRWIPPPGKG 198

Query: 604 SLYLRPLLMGTGPILGLGPAPAYTFAIFAAAVGAYFKGGQLTPIDLIVE 750
           SLY+RPLLMGTG +LGL PAP YTF IF + VG YFK G + PI+LIVE
Sbjct: 199 SLYIRPLLMGTGAVLGLAPAPEYTFLIFVSPVGNYFKEG-VAPINLIVE 246



EST assemble image


clone accession position
1 CL42g06_r AV395455 1 448
2 MX237a01_r BP091325 6 296
3 LC051b11_r AV622555 245 750




Chlamydomonas reinhardtii
Kazusa DNA Research Institute