KCC000566A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000566A_C01 KCC000566A_c01
aagacaccacgtagGCAGCTCCACGCGCCGCCCGTCACGAGACTTTGCCGAGCACTGCTT
GTCAAGCGACTCTGCCTAGATAATACGCCTTTTCGTATTGGTACTATCCGATTAATTTAT
GAGGCGCAACCCCAGCGCCGGGAGCGCAGTTGCGCAAGCGGACGGCAGCATGGCTCCGAG
CACTTCGTTGCTGCACCCCGATGGTGCCGGAGCCGCCCTAGAGCTGAGCAGTAGCATGAT
GATGCCAACGGACTGCTCTGTTATCAACGGGCGCCACGGGGCAGCGGGAGCAAGCTCGGG
TGGCGCCCAAATGGAATTCCCTTGGGAAAACACAAATGGAAATGCAGATCGCAGCAGCGT
GCACGGAACACTGCAGAAGGTCTGGGAGCGCAGCAAGTCCAGCTACCAGCTGAAGATGTC
GACCTACTCGGCGCTCGACTGGCTGGCCTTCTTCCTGCCGTGCGTGCGGTGGCTGCGGAC
CTACAAGATCAGGGAGTACCTCTTTGCCGACATCGTGGCGGGTATCTCTGTGGGCTTCAT
GGTCGTGCCGCAA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000566A_C01 KCC000566A_c01
         (553 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB17026.1| sulfate transporter-like protein [Arabidopsis th...    56  3e-07
ref|NP_196859.1| sulfate transporter [Arabidopsis thaliana] gi|3...    56  3e-07
dbj|BAA23424.1| sulfate transporter [Arabidopsis thaliana]             56  3e-07
dbj|BAC43623.1| putative sulfate transporter [Arabidopsis thaliana]    56  3e-07
emb|CAC94921.1| sulfate transporter [Brassica napus]                   55  8e-07

>dbj|BAB17026.1| sulfate transporter-like protein [Arabidopsis thaliana]
          Length = 389

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 23/52 (44%), Positives = 33/52 (63%)
 Frame = +2

Query: 398 SSYQLKMSTYSALDWLAFFLPCVRWLRTYKIREYLFADIVAGISVGFMVVPQ 553
           S +  K+     +DW+    PC RW+RTY+  EY   D++AGI+VG M+VPQ
Sbjct: 61  SGWTAKIKRMRLVDWIDTLFPCFRWIRTYRWSEYFKLDLMAGITVGIMLVPQ 112

>ref|NP_196859.1| sulfate transporter [Arabidopsis thaliana]
           gi|37089772|sp|Q9FY46|ST41_ARATH Sulfate transporter
           4.1, chloroplast precursor (AST82)
           gi|9955547|emb|CAC05432.1| sulfate transporter
           [Arabidopsis thaliana]
          Length = 685

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 23/52 (44%), Positives = 33/52 (63%)
 Frame = +2

Query: 398 SSYQLKMSTYSALDWLAFFLPCVRWLRTYKIREYLFADIVAGISVGFMVVPQ 553
           S +  K+     +DW+    PC RW+RTY+  EY   D++AGI+VG M+VPQ
Sbjct: 61  SGWTAKIKRMRLVDWIDTLFPCFRWIRTYRWSEYFKLDLMAGITVGIMLVPQ 112

>dbj|BAA23424.1| sulfate transporter [Arabidopsis thaliana]
          Length = 685

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 23/52 (44%), Positives = 33/52 (63%)
 Frame = +2

Query: 398 SSYQLKMSTYSALDWLAFFLPCVRWLRTYKIREYLFADIVAGISVGFMVVPQ 553
           S +  K+     +DW+    PC RW+RTY+  EY   D++AGI+VG M+VPQ
Sbjct: 61  SGWTAKIKRMRLVDWIDTLFPCFRWIRTYRWSEYFKLDLMAGITVGIMLVPQ 112

>dbj|BAC43623.1| putative sulfate transporter [Arabidopsis thaliana]
          Length = 352

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 23/52 (44%), Positives = 33/52 (63%)
 Frame = +2

Query: 398 SSYQLKMSTYSALDWLAFFLPCVRWLRTYKIREYLFADIVAGISVGFMVVPQ 553
           S +  K+     +DW+    PC RW+RTY+  EY   D++AGI+VG M+VPQ
Sbjct: 61  SGWTAKIKRMRLVDWIDTLFPCFRWIRTYRWSEYFKLDLMAGITVGIMLVPQ 112

>emb|CAC94921.1| sulfate transporter [Brassica napus]
          Length = 691

 Score = 54.7 bits (130), Expect = 8e-07
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = +2

Query: 398 SSYQLKMSTYSALDWLAFFLPCVRWLRTYKIREYLFADIVAGISVGFMVVPQ 553
           S ++ K+   S +DW+    PC  W+ TY+  EY   D++AGI+VG M+VPQ
Sbjct: 61  SGWRAKIKPMSLVDWVEILFPCFTWIPTYRWSEYFKLDLMAGITVGIMLVPQ 112



EST assemble image


clone accession position
1 MXL024e03_r BP094530 1 358
2 CL42f11_r AV395482 15 553
3 HCL025g11_r AV640989 18 441




Chlamydomonas reinhardtii
Kazusa DNA Research Institute