Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000546A_C01 KCC000546A_c01
(488 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM12876.1|AF494290_1 quinol-to-oxygen oxidoreductase [Chlamy... 78 5e-14
pir||C34768 ORF2 protein - Orf virus (strain NZ2) gi|332565|gb|A... 40 0.015
ref|ZP_00092697.1| COG1020: Non-ribosomal peptide synthetase mod... 40 0.015
ref|XP_303813.1| hypothetical protein XP_303813 [Homo sapiens] 39 0.034
dbj|BAA90639.1| Similar to Arabidopsis thaliana chromosome II BA... 39 0.044
>gb|AAM12876.1|AF494290_1 quinol-to-oxygen oxidoreductase [Chlamydomonas reinhardtii]
Length = 471
Score = 78.2 bits (191), Expect = 5e-14
Identities = 42/106 (39%), Positives = 61/106 (56%), Gaps = 5/106 (4%)
Frame = +3
Query: 186 ECPLFQTREGKIVPAMCADYGFRSGSGRLY-QEGYGEVPKDVWQLAKDNYLHEFTQLRRS 362
EC F R+G + MC DYGFRSG+ R+Y QE G +PK+ +QL DN+ E LR+S
Sbjct: 81 ECSAFIDRDGDFMEVMCCDYGFRSGASRMYQQENDGRIPKNAFQLGWDNFKSELRSLRQS 140
Query: 363 TRYPP----SDITAPDGAVAKVLHSAGAAAARAFGSLDKALENAGV 488
R+ S+ P +++ +S G AA + ++D+ALE A V
Sbjct: 141 IRFDDYSTISEANPPRTPMSRAAYSVGQAALDSLDAVDRALEAAQV 186
>pir||C34768 ORF2 protein - Orf virus (strain NZ2) gi|332565|gb|AAA46789.1| ORF2
Length = 221
Score = 40.0 bits (92), Expect = 0.015
Identities = 36/106 (33%), Positives = 40/106 (36%), Gaps = 1/106 (0%)
Frame = +1
Query: 172 PLARANARCSRRVRGRSFQPCVRTTASAAAAGGCI-RRGTARCPRTYGSWPRTTTCMSSL 348
P R ARC RR R R + GGC RR AR W R C
Sbjct: 24 PRRRWCARCWRRARARR---------ARTRRGGCRWRRCCARRCAAAARWTRGCRCCWR- 73
Query: 349 SCGAPPATRPPTSRRRMVPLPRCCTQRAQRRPARSGLWTRRWRTRA 486
GA P R + R CC +RA+ G W RRWR RA
Sbjct: 74 --GAGPRPRRAPAAARGARRRGCCARRARG----GGGWPRRWRPRA 113
>ref|ZP_00092697.1| COG1020: Non-ribosomal peptide synthetase modules and related
proteins [Azotobacter vinelandii]
Length = 4332
Score = 40.0 bits (92), Expect = 0.015
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Frame = +1
Query: 172 PLARANARCSRR---VRGRSFQPCVRTTASAAAAGGCIRRGTARCPRTYGSWPRTTTCMS 342
P RA R + R VRG QP SAA G RRGTA + PR +
Sbjct: 1003 PAVRAAGRGAGRRAAVRG-DVQPPAARPGSAAPPAGAARRGTAL------AQPRGQVRPA 1055
Query: 343 SLSCGAPPATRPPTSRRRMVPLPRCCTQRAQRRPARSGLWTRRWRTRA 486
+ G PP PP R R+ + R +RA RR R+ T R RA
Sbjct: 1056 TAQRGGPPGAYPPVFRLRLRTV-RARQRRASRRAFRAPAGTDRREPRA 1102
>ref|XP_303813.1| hypothetical protein XP_303813 [Homo sapiens]
Length = 615
Score = 38.9 bits (89), Expect = 0.034
Identities = 33/124 (26%), Positives = 51/124 (40%), Gaps = 5/124 (4%)
Frame = +1
Query: 25 PLHSRDPALSVDFSLSRCS-----RPGS*AATGQAGSAIVTGRR*GFKQFQHL*PLARAN 189
PLH +DP ++ L + R AT Q+ +++ +G P R
Sbjct: 73 PLHMQDPLVTCQHVLEKLPLVVVWRQSQGTATPQSLASVPSGS-----------PHPRGQ 121
Query: 190 ARCSRRVRGRSFQPCVRTTASAAAAGGCIRRGTARCPRTYGSWPRTTTCMSSLSCGAPPA 369
++CS +RG + Q A G + TA P WP T + S++ G PPA
Sbjct: 122 SQCSNVLRGDTCQ------ARGLDEVGSSMKPTATDPAPLSPWPPTESEAGSVAQGDPPA 175
Query: 370 TRPP 381
T+ P
Sbjct: 176 TKGP 179
>dbj|BAA90639.1| Similar to Arabidopsis thaliana chromosome II BAC F9O13 genomic
sequence, putative non-LTR retroelement reverse
transcriptase. (AC006248) [Oryza sativa (japonica
cultivar-group)]
Length = 1223
Score = 38.5 bits (88), Expect = 0.044
Identities = 30/97 (30%), Positives = 39/97 (39%), Gaps = 2/97 (2%)
Frame = -3
Query: 480 RSPTPCPETRTRGPPLRPLSAAPW--QRHHPAP*CRRAGSGWSAAAE*THAGSCPWPAAI 307
R+PT E R + PP +A W +R P RA + A C W ++
Sbjct: 299 RTPTAAIEPREQEPPAVKFAAGKWNSRRIRPPSMAARASPAFFTAPR-----RCCWSSSR 353
Query: 306 RPWAPRRTPPDTAARCRCGSRSPHTWLERSSPHASGT 196
RPWA T ARC R P T S + +GT
Sbjct: 354 RPWA--TTSASAGARC----RPPSTAARASPAYCAGT 384
