Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000529A_C01 KCC000529A_c01
(367 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF18101.1|AF204400_1 FrgA [Myxococcus xanthus] 45 2e-04
pir||S31719 proline-rich protein - African clawed frog gi|64956|... 44 4e-04
dbj|BAC87604.1| unnamed protein product [Homo sapiens] 43 0.001
dbj|BAC86079.1| unnamed protein product [Homo sapiens] 42 0.003
ref|ZP_00009817.1| COG2885: Outer membrane protein and related p... 41 0.004
>gb|AAF18101.1|AF204400_1 FrgA [Myxococcus xanthus]
Length = 883
Score = 45.4 bits (106), Expect = 2e-04
Identities = 42/118 (35%), Positives = 51/118 (42%), Gaps = 7/118 (5%)
Frame = +2
Query: 35 RSPLHPPPSSSVGDSPAPRPDVASRCRSGARGSPCQLRRIARRAATPSG*WPWAP*TPGR 214
R P PP + + G P P P + R+ R + Q AR A P+ P P
Sbjct: 158 RPPPPPPEALTPGPEPLPPPGPPAFVRAPLRLNMPQAEAPARPAQRPTPQAAQIPVLPFT 217
Query: 215 RCPGCTPMRRR---PARPPAAS---RAP-TAAAWIPKWPSWLLRPTTPKWPAQPASAA 367
PG P PA PPAA+ RAP TA A P PS PT + PAQ +AA
Sbjct: 218 PAPGTAPSSANTSTPASPPAATLPPRAPATAPAPKPAAPSSPPAPTGARAPAQSGTAA 275
>pir||S31719 proline-rich protein - African clawed frog gi|64956|emb|CAA48321.1|
Proline rich protein [Xenopus laevis]
Length = 379
Score = 44.3 bits (103), Expect = 4e-04
Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +2
Query: 50 PPPSSSVG---DSPAPRPDVASRCRSGARGSPCQLRRIARRAATPSG*WPWAP*TPGRRC 220
PP S+S G S AP P R ++GA +P Q + R P TPG R
Sbjct: 168 PPSSTSSGMKHSSSAPPPPPPGRRQAGAPPAPSQNAKPYNREKP-------LPPTPGHRA 220
Query: 221 PGCTPMRRRPARPPAASRAPTAAAWIPKWPSWLLRPTTPKWPAQP 355
P P++ P+ P SR+P+A + P P + PT+ P P
Sbjct: 221 PAAPPVKPPPS--PINSRSPSAHSQPPPPPPYRQPPTSLNGPPSP 263
>dbj|BAC87604.1| unnamed protein product [Homo sapiens]
Length = 215
Score = 42.7 bits (99), Expect = 0.001
Identities = 33/95 (34%), Positives = 40/95 (41%), Gaps = 2/95 (2%)
Frame = +2
Query: 38 SPLHPPPSSSVGDSPAPRPDVASRCRSGARGSPCQLRRIARRAATPSG*WPWAP*TP--G 211
SP HPPPS PA +P SG RG P Q+ + TP WP P P
Sbjct: 116 SPAHPPPSL-----PASKPR-----NSGFRG-PSQVSTWQQCLQTPG--WPICPPAPLSD 162
Query: 212 RRCPGCTPMRRRPARPPAASRAPTAAAWIPKWPSW 316
PGC + P+ P PT+ W+P P W
Sbjct: 163 LSLPGCPCLH--PSSPSHCRCLPTSHPWVPSQPLW 195
>dbj|BAC86079.1| unnamed protein product [Homo sapiens]
Length = 215
Score = 41.6 bits (96), Expect = 0.003
Identities = 34/97 (35%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +2
Query: 38 SPLHPPPSSSVGDSPAPRPDVASRCRSGARGSPCQLRRIARRAATPSG*WPWAP*TPGR- 214
SP HPPPS PA +P SG RG P Q+ + TP WP P P R
Sbjct: 116 SPAHPPPSL-----PASKPR-----NSGFRG-PSQVSTWQQCLQTPG--WPICP--PARL 160
Query: 215 ---RCPGCTPMRRRPARPPAASRAPTAAAWIPKWPSW 316
PGC + P+ P PT+ W+P P W
Sbjct: 161 SDLSLPGCPCLH--PSSPSHCRCLPTSHPWVPSQPLW 195
>ref|ZP_00009817.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Rhodopseudomonas palustris]
Length = 689
Score = 41.2 bits (95), Expect = 0.004
Identities = 40/112 (35%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Frame = +2
Query: 53 PPSSSVGDSPAPRPDVASRCRSGARGSPCQLRRIARRAATPSG*WPWAP*TP-GRRCPGC 229
PP+++ D A +PD A + RG P P AP TP PG
Sbjct: 194 PPNAAAPD--AAKPDAAKQPPGERRGPP-----------------PGAPGTPPNATAPGM 234
Query: 230 TPM-----RRRPARPPAASRAPTAAAWIPKWPSWL--LRPTTPKWPAQPASA 364
TP RR P PPAA+ P AAA P PS PT+P P+ PA A
Sbjct: 235 TPPPGEAPRRGPPPPPAAANPPPAAAPTPA-PSAAPQAAPTSPANPSGPAVA 285
