KCC000514A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000514A_C01 KCC000514A_c01
tgcctggtttcgtctgcagcgtcgacctgctgaaacgtgacggtgaattggtgtcatgac
cgcctcgagacttgacgaagACCCGCTTGCCGGGTCCGTGCTTCGGACGCTGCGAATTCT
GGGCCGGAGCAGCGAGGGCGACAATGTGACCGTCCTCGCGTCCAGCAGCTCCACGGGGCA
GCTGGTGGCCGTGAAGCTGATATCACGCGGCTTCGACTCGCCACGGGCAAAGTACCTGTT
GCGGGAGCTGTTAAACCACTATGAGCTAACCCTCGCCAAGCACCCGCACGTCGTCAGCCT
ACTGGACGTGTTCCTCACGCCGCAGCATATGGCCATCGTGATGGAGTACGTTGACGGGGA
GAACCTGCAGGTGTTTACGGAGAAGGCGGGTGGGTGCGTCATAGAGCCCCTGGCGCGCTT
CCTTTTCCAGCAGCTGGTAATCTCGCTGGACTTCTGCCACCGGCGCGGCAAGGTGAACCG
TGGCATCCGGCCCACCAGCCTGCTACTGCAGCTGAGCGCCTCGGCGCTGCCTCTGCTCAA
GCTGTCGGACTTCTCGCTGAGCAAGGACACGCTGCGGCACTCGGAGCCCAGGTCGCAGGT
GGGCACAGCCATGTTCTGCGCGCCCGAGGTGCTTCAGAACTTCAAGGGGGCGCCCTAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000514A_C01 KCC000514A_c01
         (658 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAC98509.1| sulfur stress regulator [Chlamydomonas reinhardtii]    123  2e-27
pir||S56719 serine/threonine-specific protein kinase SPK-1 (EC 2...   112  5e-24
gb|AAA34017.1| protein kinase 2                                       112  5e-24
ref|NP_196476.1| serine/threonine protein kinase (ASK2) [Arabido...   107  2e-22
gb|AAM65503.1| serine/threonine-protein kinase [Arabidopsis thal...   106  3e-22

>gb|AAC98509.1| sulfur stress regulator [Chlamydomonas reinhardtii]
          Length = 357

 Score =  123 bits (309), Expect = 2e-27
 Identities = 73/168 (43%), Positives = 98/168 (57%)
 Frame = +2

Query: 155 LASSSSTGQLVAVKLISRGFDSPRAKYLLRELLNHYELTLAKHPHVVSLLDVFLTPQHMA 334
           LA    TG+  AVK I RG      KY+ RE++NH  L    HPH+V   +VFLTP H+ 
Sbjct: 39  LARDKLTGETWAVKFIERG--DKITKYVEREIINHRCLV---HPHIVQFREVFLTPTHLC 93

Query: 335 IVMEYVDGENLQVFTEKAGGCVIEPLARFLFQQLVISLDFCHRRGKVNRGIRPTSLLLQL 514
           IVME+  G ++  +  +  G + E  AR+ FQQL++ LD+CHR G VNR I+  + L  L
Sbjct: 94  IVMEFAPGGDMFEYVVRKNG-LREDEARWFFQQLIVGLDYCHRMGVVNRDIKLENTL--L 150

Query: 515 SASALPLLKLSDFSLSKDTLRHSEPRSQVGTAMFCAPEVLQNFKGAPY 658
            +S  PL+K+ DF  SK     S P S+VGT  + APEV+   KG  Y
Sbjct: 151 DSSPRPLVKICDFGYSKHEKFQSAPGSRVGTPAYLAPEVILTTKGKTY 198

>pir||S56719 serine/threonine-specific protein kinase SPK-1 (EC 2.7.1.-) -
           soybean gi|169991|gb|AAA33979.1| protein kinase
          Length = 339

 Score =  112 bits (280), Expect = 5e-24
 Identities = 72/176 (40%), Positives = 99/176 (55%)
 Frame = +2

Query: 107 TLRILGRSSEGDNVTVLASSSSTGQLVAVKLISRGFDSPRAKYLLRELLNHYELTLAKHP 286
           TL+ LG  + G  V  LA    TG+LVA+K I RG        + RE++NH  L   +HP
Sbjct: 7   TLKELGSGNFG--VARLAKDKETGELVAIKYIERG--KKIDANVQREIVNHRSL---RHP 59

Query: 287 HVVSLLDVFLTPQHMAIVMEYVDGENLQVFTEKAGGCVIEPLARFLFQQLVISLDFCHRR 466
           +++   +VFLTP H+AIV+EY  G  L      AG  + E  ARF FQQL+  + +CH  
Sbjct: 60  NIIRFKEVFLTPTHLAIVLEYAAGGELFERICNAGR-LSEDEARFFFQQLISGVSYCHSM 118

Query: 467 GKVNRGIRPTSLLLQLSASALPLLKLSDFSLSKDTLRHSEPRSQVGTAMFCAPEVL 634
              +R ++  + LL    +  P LK+ DF  SK  L HS+P+S VGT  + APEVL
Sbjct: 119 QICHRDLKLENTLLD--GNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVL 172

>gb|AAA34017.1| protein kinase 2
          Length = 339

 Score =  112 bits (280), Expect = 5e-24
 Identities = 72/176 (40%), Positives = 99/176 (55%)
 Frame = +2

Query: 107 TLRILGRSSEGDNVTVLASSSSTGQLVAVKLISRGFDSPRAKYLLRELLNHYELTLAKHP 286
           TL+ LG  + G  V  LA    TG+LVA+K I RG        + RE++NH  L   +HP
Sbjct: 7   TLKELGSGNFG--VARLAKDKETGELVAIKYIERG--KKIDANVQREIVNHRSL---RHP 59

Query: 287 HVVSLLDVFLTPQHMAIVMEYVDGENLQVFTEKAGGCVIEPLARFLFQQLVISLDFCHRR 466
           +++   +VFLTP H+AIV+EY  G  L      AG  + E  ARF FQQL+  + +CH  
Sbjct: 60  NIIRFKEVFLTPTHLAIVLEYAAGGELFERICNAGR-LSEDEARFFFQQLISGVSYCHSM 118

Query: 467 GKVNRGIRPTSLLLQLSASALPLLKLSDFSLSKDTLRHSEPRSQVGTAMFCAPEVL 634
              +R ++  + LL    +  P LK+ DF  SK  L HS+P+S VGT  + APEVL
Sbjct: 119 QICHRDLKLENTLLD--GNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVL 172

>ref|NP_196476.1| serine/threonine protein kinase (ASK2) [Arabidopsis thaliana]
           gi|26454616|sp|P43292|ASK2_ARATH
           Serine/threonine-protein kinase ASK2
           gi|9759353|dbj|BAB10008.1| serine/threonine-protein
           kinase [Arabidopsis thaliana]
          Length = 353

 Score =  107 bits (266), Expect = 2e-22
 Identities = 67/165 (40%), Positives = 93/165 (55%), Gaps = 2/165 (1%)
 Frame = +2

Query: 146 VTVLASSSSTGQLVAVKLISRGFDSPRAKYLLRELLNHYELTLAKHPHVVSLLDVFLTPQ 325
           V  L     T +LVA+K I RG      + + RE++NH  L   KHP+++   +V LTP 
Sbjct: 17  VARLLRHKDTKELVAMKYIERGRKID--ENVAREIINHRSL---KHPNIIRFKEVILTPT 71

Query: 326 HMAIVMEYVDGENL--QVFTEKAGGCVIEPLARFLFQQLVISLDFCHRRGKVNRGIRPTS 499
           H+AIVMEY  G  L  ++ T    G   E  AR+ FQQL+  +D+CH     +R ++  +
Sbjct: 72  HLAIVMEYASGGELFDRICT---AGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLEN 128

Query: 500 LLLQLSASALPLLKLSDFSLSKDTLRHSEPRSQVGTAMFCAPEVL 634
            LL    S  PLLK+ DF  SK ++ HS P+S VGT  + APEVL
Sbjct: 129 TLLD--GSPAPLLKICDFGYSKSSILHSRPKSTVGTPAYIAPEVL 171

>gb|AAM65503.1| serine/threonine-protein kinase [Arabidopsis thaliana]
          Length = 358

 Score =  106 bits (265), Expect = 3e-22
 Identities = 67/163 (41%), Positives = 91/163 (55%)
 Frame = +2

Query: 146 VTVLASSSSTGQLVAVKLISRGFDSPRAKYLLRELLNHYELTLAKHPHVVSLLDVFLTPQ 325
           V  L     T +LVA+K I RG      + + RE++NH  L   +HP+++   +V LTP 
Sbjct: 17  VARLLRHKETKELVAMKYIERGRKID--ENVAREIINHRSL---RHPNIIRFKEVILTPT 71

Query: 326 HMAIVMEYVDGENLQVFTEKAGGCVIEPLARFLFQQLVISLDFCHRRGKVNRGIRPTSLL 505
           H+AIVMEY  G  L      AG    E  AR+ FQQL+  +D+CH     +R ++  + L
Sbjct: 72  HLAIVMEYASGGELFERICNAGR-FSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTL 130

Query: 506 LQLSASALPLLKLSDFSLSKDTLRHSEPRSQVGTAMFCAPEVL 634
           L    S  PLLK+ DF  SK +L HS P+S VGT  + APEVL
Sbjct: 131 LD--GSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVL 171



EST assemble image


clone accession position
1 CL36f01_r AV395127 1 432
2 HCL083c02_r AV644167 127 658




Chlamydomonas reinhardtii
Kazusa DNA Research Institute