Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000512A_C01 KCC000512A_c01
(567 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_505801.1| protein of unknown function C6 and thrombospond... 37 0.19
gb|AAO63565.1| RNA editing complex protein MP100; putative exonu... 35 0.55
ref|XP_203424.1| RIKEN cDNA 1700024J04 [Mus musculus] 34 1.2
dbj|BAB24517.1| unnamed protein product [Mus musculus] 34 1.2
dbj|BAC05951.1| seven transmembrane helix receptor [Homo sapiens] 34 1.6
>ref|NP_505801.1| protein of unknown function C6 and thrombospondin, type I (5L452)
[Caenorhabditis elegans] gi|7504031|pir||T21064
hypothetical protein F53B7.5 - Caenorhabditis elegans
gi|3876064|emb|CAA96634.1| Hypothetical protein F53B7.5
[Caenorhabditis elegans] gi|3877441|emb|CAA96654.1|
Hypothetical protein F53B7.5 [Caenorhabditis elegans]
Length = 2761
Score = 37.0 bits (84), Expect = 0.19
Identities = 26/75 (34%), Positives = 34/75 (44%), Gaps = 5/75 (6%)
Frame = +2
Query: 155 CLVSVSTTTAV-----ARCVLCTAKLSAPSLALSPSCSDGQLAASAFALQQGHMATRLPI 319
C+V++STTT V A C LCT + P++ L P+ D F L AT +
Sbjct: 2173 CVVAISTTTLVPATVAAGCKLCT---NLPAIGLEPNQLDANGRNGQFILDHVTTATACRV 2229
Query: 320 ILKPCAAMCLSRAST 364
I CA S ST
Sbjct: 2230 IYLSCAGSSASENST 2244
>gb|AAO63565.1| RNA editing complex protein MP100; putative exonuclease
[Trypanosoma brucei]
Length = 902
Score = 35.4 bits (80), Expect = 0.55
Identities = 26/79 (32%), Positives = 40/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 197 VLCTAKLSAPSLALSPSCSDGQLAASAFALQQ--GHMATRLPIILKPCAAMCLSRASTTA 370
+LCT + AP P+ GQL ++A + Q GH+A A+C AST
Sbjct: 358 MLCTGQ--APQCTYLPAAGTGQLGSTAPSAVQLAGHLA-----------ALC---ASTAQ 401
Query: 371 KRSQCPTLQPAVVATYKSS 427
+ ++C +LQP++V K S
Sbjct: 402 RNARCTSLQPSLVTPEKGS 420
>ref|XP_203424.1| RIKEN cDNA 1700024J04 [Mus musculus]
Length = 109
Score = 34.3 bits (77), Expect = 1.2
Identities = 13/42 (30%), Positives = 18/42 (41%)
Frame = +1
Query: 337 CHVPLARVNYCKALPVSYTSACCCCHL*VFKKCAALSIAVCY 462
CH + +YC P + CC CH FK C + C+
Sbjct: 14 CHPRSSESHYCTCYPRCFKRCCCMCHRKGFKWCCSTCYPRCF 55
>dbj|BAB24517.1| unnamed protein product [Mus musculus]
Length = 199
Score = 34.3 bits (77), Expect = 1.2
Identities = 13/42 (30%), Positives = 18/42 (41%)
Frame = +1
Query: 337 CHVPLARVNYCKALPVSYTSACCCCHL*VFKKCAALSIAVCY 462
CH + +YC P + CC CH FK C + C+
Sbjct: 14 CHPRSSESHYCTCYPRCFKRCCCMCHRKGFKWCCSTCYPRCF 55
>dbj|BAC05951.1| seven transmembrane helix receptor [Homo sapiens]
Length = 472
Score = 33.9 bits (76), Expect = 1.6
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 398 PAVVATYKSSKSVLLYPLQYAI-HTCANIARRTHLPCAGLLRYIQTQPSRPIP 553
PAV+A S + P+ YAI H +A HLPC G+L + + SRP P
Sbjct: 335 PAVIA----KASAIHNPIIYAITHPKYRVAIAQHLPCLGVLLGVSRRHSRPYP 383
