Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000490A_C01 KCC000490A_c01
(610 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB32911.1| P0666G04.13 [Oryza sativa (japonica cultivar-gro... 49 6e-05
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 41 6e-04
ref|ZP_00012675.1| COG0247: Fe-S oxidoreductase [Rhodopseudomona... 44 0.002
dbj|BAC84548.1| hypothetical protein [Oryza sativa (japonica cul... 43 0.003
dbj|BAC10766.1| putative DEIH-box RNA/DNA helicase [Oryza sativa... 43 0.004
>dbj|BAB32911.1| P0666G04.13 [Oryza sativa (japonica cultivar-group)]
Length = 162
Score = 48.9 bits (115), Expect = 6e-05
Identities = 36/83 (43%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -2
Query: 606 PPPLPPRRCPRRAPPPPAVAASPRHAHPAAASC*TGSPCRPG-*AHWPPAAPAGSATCGC 430
P P PP PR PPPPA A+ AHP S P P PP +PA A
Sbjct: 35 PRPSPPPPQPRLPPPPPASHAAADLAHPRRCSRRRPRPSPPPLQPPLPPPSPASRA--AV 92
Query: 429 HLAAAAGSRRQPCACRLPGPQAP 361
LA GSRR+P RLP PQ P
Sbjct: 93 DLAPPRGSRRRP---RLPPPQPP 112
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 41.2 bits (95), Expect(2) = 6e-04
Identities = 25/59 (42%), Positives = 29/59 (48%), Gaps = 3/59 (5%)
Frame = -2
Query: 606 PPPLPPRRCPRRAPPPPAVAASPRHA---HPAAASC*TGSPCRPG*AHWPPAAPAGSAT 439
PPP PP P PP P AA+P+HA P A+ T +P P PPA PA T
Sbjct: 137 PPPAPPAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPP-----PPAGPAARPT 190
Score = 38.5 bits (88), Expect = 0.076
Identities = 22/52 (42%), Positives = 26/52 (49%)
Frame = -2
Query: 606 PPPLPPRRCPRRAPPPPAVAASPRHAHPAAASC*TGSPCRPG*AHWPPAAPA 451
PPP PP P PPPP AA + + P AA+ +P P PPA PA
Sbjct: 97 PPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPP-----PPAPPA 143
Score = 37.4 bits (85), Expect = 0.17
Identities = 28/84 (33%), Positives = 32/84 (37%), Gaps = 2/84 (2%)
Frame = -2
Query: 606 PPPLPPRRCPRRAPPPPAVAASPRHAHPAAASC*TGSPCRPG*AHWPPAAPAGSATCGCH 427
PPP PP P PPPP A PA + T P P +PA +AT
Sbjct: 164 PPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPT 223
Query: 426 LAAAAGSRRQPCACRLPG--PQAP 361
A + P A PG P AP
Sbjct: 224 PTPAPTATPAPTATPAPGSTPGAP 247
Score = 37.0 bits (84), Expect = 0.22
Identities = 32/94 (34%), Positives = 36/94 (38%), Gaps = 12/94 (12%)
Frame = -2
Query: 606 PPPLPPRRCPRRAPPPPAVA------ASPRHAHPAAASC*TGSPCRPG*A--HWPPAAPA 451
PPP PP P++ PPPA A P A PAA T P A H PP P
Sbjct: 109 PPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPPPPPP 168
Query: 450 GSA----TCGCHLAAAAGSRRQPCACRLPGPQAP 361
+A T A +R P P P AP
Sbjct: 169 PAARPTPTPPPPPPAGPAARPTPAPTATPTPVAP 202
Score = 37.0 bits (84), Expect = 0.22
Identities = 22/53 (41%), Positives = 23/53 (42%)
Frame = -2
Query: 609 GPPPLPPRRCPRRAPPPPAVAASPRHAHPAAASC*TGSPCRPG*AHWPPAAPA 451
GPP P P R PP AA P HP AA +P RP PP PA
Sbjct: 54 GPPGAAPPAAPARPAAPPPAAAPP---HPPAAPPPAAAPPRPAAPPPPPPPPA 103
Score = 23.5 bits (49), Expect(2) = 6e-04
Identities = 11/19 (57%), Positives = 12/19 (62%)
Frame = -1
Query: 400 PAVRLPTPRPTSTEAAAAP 344
PA R PTP PT+T AP
Sbjct: 185 PAAR-PTPAPTATPTPVAP 202
>ref|ZP_00012675.1| COG0247: Fe-S oxidoreductase [Rhodopseudomonas palustris]
Length = 357
Score = 43.5 bits (101), Expect = 0.002
Identities = 27/69 (39%), Positives = 33/69 (47%)
Frame = -2
Query: 564 PPPAVAASPRHAHPAAASC*TGSPCRPG*AHWPPAAPAGSATCGCHLAAAAGSRRQPCAC 385
PP ++ P A PAAA+ T + P A PPA PA + H AA A + P A
Sbjct: 275 PPVSIMTEPTPAKPAAAAA-TNAKSAPA-AKKPPAPPAAAQASATHNAAGAAAANPPPAK 332
Query: 384 RLPGPQAPK 358
R P P PK
Sbjct: 333 RPPAPPKPK 341
>dbj|BAC84548.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 177
Score = 43.1 bits (100), Expect = 0.003
Identities = 37/106 (34%), Positives = 45/106 (41%), Gaps = 20/106 (18%)
Frame = +2
Query: 350 SCSFGACGPGSRQAHGWRREPAAAAKWQPQVAEPAGAAG--GQCAHP-GRQGLPVQQLAA 520
S S GA PG R GW A A+ + AG++G GQ H G G AA
Sbjct: 48 SGSHGAAQPGHRHGSGW--PDRATARGSAATGDGAGSSGSCGQWQHTLGSGGAARHGEAA 105
Query: 521 AGCA*R-------------GEAATAGGGGARR----GQRRGGSGGG 607
GC + G AT+GGG +R GQR+GG G G
Sbjct: 106 TGCLAQPAATWARSARQRTGRTATSGGGASRAGPGGGQRKGGRGRG 151
>dbj|BAC10766.1| putative DEIH-box RNA/DNA helicase [Oryza sativa (japonica
cultivar-group)]
Length = 1211
Score = 42.7 bits (99), Expect = 0.004
Identities = 32/81 (39%), Positives = 37/81 (45%)
Frame = +2
Query: 365 ACGPGSRQAHGWRREPAAAAKWQPQVAEPAGAAGGQCAHPGRQGLPVQQLAAAGCA*RGE 544
ACG G +A G P A P + + GG+ GR+G AAAG G
Sbjct: 48 ACGKGRSRA-GRAASPDVVATKPPPLHDEEEEEGGRMVRRGRKGKD----AAAGAGGTG- 101
Query: 545 AATAGGGGARRGQRRGGSGGG 607
GGGA RG RGGSGGG
Sbjct: 102 ---GRGGGAGRGGGRGGSGGG 119
