Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000488A_C01 KCC000488A_c01
(380 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_173020.1| F-box protein family [Arabidopsis thaliana] gi|... 38 0.040
gb|AAO37179.1| hypothetical protein [Arabidopsis thaliana] 36 0.12
gb|AAO37178.1| hypothetical protein [Arabidopsis thaliana] 36 0.12
ref|NP_179373.1| hypothetical protein [Arabidopsis thaliana] gi|... 36 0.12
gb|AAM62697.1| unknown [Arabidopsis thaliana] 35 0.20
>ref|NP_173020.1| F-box protein family [Arabidopsis thaliana] gi|25518749|pir||H86290
hypothetical protein F7H2.2 [imported] - Arabidopsis
thaliana gi|8927647|gb|AAF82138.1|AC034256_2 Contains
weak similarity to fimbriata protein from Antirrhinum
majus gb|S71192 and contains an F-box PF|00646 domain.
[Arabidopsis thaliana]
Length = 410
Score = 37.7 bits (86), Expect = 0.040
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 217 GSRSLQELPRDIIAQVVAALPYASLPSFRATCSVARDLVDS 339
G + ELP +++A++VA LP+ S+ F++ C R L++S
Sbjct: 12 GCKRRIELPEELLAEIVARLPFISITRFKSVCKGWRSLIES 52
>gb|AAO37179.1| hypothetical protein [Arabidopsis thaliana]
Length = 105
Score = 36.2 bits (82), Expect = 0.12
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 229 LQELPRDIIAQVVAALPYASLPSFRATCSVARDL 330
+ +LPRD++A++++ +P ASL S R TC DL
Sbjct: 4 MSDLPRDLLAEILSRVPLASLRSVRFTCKKWNDL 37
>gb|AAO37178.1| hypothetical protein [Arabidopsis thaliana]
Length = 394
Score = 36.2 bits (82), Expect = 0.12
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 229 LQELPRDIIAQVVAALPYASLPSFRATCSVARDL 330
+ +LPRD++A++++ +P ASL S R TC DL
Sbjct: 4 MSDLPRDLLAEILSRVPLASLRSVRFTCKKWNDL 37
>ref|NP_179373.1| hypothetical protein [Arabidopsis thaliana] gi|7486988|pir||T00841
hypothetical protein At2g17830 [imported] - Arabidopsis
thaliana gi|2708751|gb|AAD03575.1| unknown protein
[Arabidopsis thaliana]
Length = 391
Score = 36.2 bits (82), Expect = 0.12
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 229 LQELPRDIIAQVVAALPYASLPSFRATCSVARDL 330
+ +LPRD++A++++ +P ASL S R TC DL
Sbjct: 1 MSDLPRDLLAEILSRVPLASLRSVRFTCKKWNDL 34
>gb|AAM62697.1| unknown [Arabidopsis thaliana]
Length = 467
Score = 35.4 bits (80), Expect = 0.20
Identities = 18/48 (37%), Positives = 25/48 (51%)
Frame = +1
Query: 202 LAGPRGSRSLQELPRDIIAQVVAALPYASLPSFRATCSVARDLVDSAS 345
++G QE P+D+ VV+ LP A+ FRA C L+DS S
Sbjct: 108 ISGNMDQEIWQEFPQDLFEDVVSRLPMATFFQFRAVCRKWNALIDSDS 155
