KCC000483A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000483A_C01 KCC000483A_c01
cTTGTAAACGAAAAAGACGTGACACAATGAAGGCCCTGCGAAGTGGAACCGCTGTGGCCC
GGGGCCAAGCGGGCTGTGTTTCTCCCGCTCCGCGCCCTGTGCCTATGTCGTCTCAGACGA
TGATTCCGAGCACCAGCTCCCCAGCAACTCGTGCACCCGCCCGGTCCGGTCGCCGCGCCC
TCGCTGTGTCGGCCAAGCTTGCTGATGGGTCCCGTCGCATGCAGTCCGAGGAGGTGCGCC
GCGCCAAGGAGGTGGCCCAGGCTGCGCTGGCCAAGGACAGCCCCGCCGACTGGGTGGACC
GCTACGGCTCGGAGCCGCGCAAGGGCGCCGACATCCTGGTTCAGGCGCTGGAGCGCGAGG
GCGTGGACAGCGTGTTCGCCTACCCGGGCGGCGCCTCCATGGAGATCCACCAGGCCCTCA
CGCGCTCCGACCGCATCACCAACGTGCTGTGCCGCCACGAGCAGGGCGAGATCTTTGCCG
CCGAGGGCTACGCCAAGGCCGCGGGCCGCGTGGGCGTGTGCATCGCCACCTCAGGCCCCG
GCGCCACCAACCTGGTCACGGGGCTGGCGGACGCCATGATGGACTCCATCCCCCTGGTGG
CCATCACCGGCCAGGTGCCGCGCCGCATGATCGGCACCGACGCCTTCCAGGAGACTCCCA
TTGTGGAGGTGACTCGCGCCATCACCAAGCACAACTACCTGGTGCTGGACATCAAGGACC
TGCCGCGTGTGATCAAGGAGGCCTTCTACCTGGCGCGCACCGGCCGGCCCGGTCCTGTGC
TGGTGGACGTGCCCAAGGACATCCAGCAGCAGCTGGCGGTGCCGGACTGGGAGGCGCCCA
TGAGCATCACGGGCTACATCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000483A_C01 KCC000483A_c01
         (861 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T07941 acetolactate synthase (EC 4.1.3.18) - Chlamydomonas ...   543  e-153
pir||T07912 acetolactate synthase (EC 4.1.3.18) - Chlamydomonas ...   541  e-153
pir||T07968 acetolactate synthase (EC 4.1.3.18) - Volvox carteri...   442  e-123
pir||T08085 acetolactate synthase (EC 4.1.3.18) precursor - Volv...   432  e-120
gb|AAK50821.1|AF363370_1 acetolactate synthase [Amaranthus powel...   322  7e-87

>pir||T07941 acetolactate synthase (EC 4.1.3.18) - Chlamydomonas reinhardtii
           gi|2906139|gb|AAC03784.1| acetolactate synthase
           [Chlamydomonas reinhardtii]
          Length = 683

 Score =  543 bits (1398), Expect = e-153
 Identities = 277/278 (99%), Positives = 277/278 (99%)
 Frame = +3

Query: 27  MKALRSGTAVARGQAGCVSPAPRPVPMSSQTMIPSTSSPATRAPARSGRRALAVSAKLAD 206
           MKALRSGTAVARGQAGCVSPAPRPVPMSSQTMIPSTSSPATRAPARSGRRALAVSAKLAD
Sbjct: 1   MKALRSGTAVARGQAGCVSPAPRPVPMSSQTMIPSTSSPATRAPARSGRRALAVSAKLAD 60

Query: 207 GSRRMQSEEVRRAKEVAQAALAKDSPADWVDRYGSEPRKGADILVQALEREGVDSVFAYP 386
           GSRRMQSEEVRRAKEVAQAALAKDSPADWVDRYGSEPRKGADILVQALEREGVDSVFAYP
Sbjct: 61  GSRRMQSEEVRRAKEVAQAALAKDSPADWVDRYGSEPRKGADILVQALEREGVDSVFAYP 120

Query: 387 GGASMEIHQALTRSDRITNVLCRHEQGEIFAAEGYAKAAGRVGVCIATSGPGATNLVTGL 566
           GGASMEIHQALTRSDRITNVLCRHEQGEIFAAEGYAKAAGRVGVCIATSGPGATNLVTGL
Sbjct: 121 GGASMEIHQALTRSDRITNVLCRHEQGEIFAAEGYAKAAGRVGVCIATSGPGATNLVTGL 180

Query: 567 ADAMMDSIPLVAITGQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAF 746
           ADAMMDSIPLVAITGQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAF
Sbjct: 181 ADAMMDSIPLVAITGQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAF 240

Query: 747 YLARTGRPGPVLVDVPKDIQQQLAVPDWEAPMSITGYI 860
           YLARTGRPGPVLVDVP DIQQQLAVPDWEAPMSITGYI
Sbjct: 241 YLARTGRPGPVLVDVPTDIQQQLAVPDWEAPMSITGYI 278

>pir||T07912 acetolactate synthase (EC 4.1.3.18) - Chlamydomonas reinhardtii
           gi|2435505|gb|AAB88292.1| acetolactate synthase
           [Chlamydomonas reinhardtii]
          Length = 683

 Score =  541 bits (1394), Expect = e-153
 Identities = 276/278 (99%), Positives = 276/278 (99%)
 Frame = +3

Query: 27  MKALRSGTAVARGQAGCVSPAPRPVPMSSQTMIPSTSSPATRAPARSGRRALAVSAKLAD 206
           MKALRSGTAVARGQAGCVSPAPRPVPMSSQ MIPSTSSPA RAPARSGRRALAVSAKLAD
Sbjct: 1   MKALRSGTAVARGQAGCVSPAPRPVPMSSQAMIPSTSSPAARAPARSGRRALAVSAKLAD 60

Query: 207 GSRRMQSEEVRRAKEVAQAALAKDSPADWVDRYGSEPRKGADILVQALEREGVDSVFAYP 386
           GSRRMQSEEVRRAKEVAQAALAKDSPADWVDRYGSEPRKGADILVQALEREGVDSVFAYP
Sbjct: 61  GSRRMQSEEVRRAKEVAQAALAKDSPADWVDRYGSEPRKGADILVQALEREGVDSVFAYP 120

Query: 387 GGASMEIHQALTRSDRITNVLCRHEQGEIFAAEGYAKAAGRVGVCIATSGPGATNLVTGL 566
           GGASMEIHQALTRSDRITNVLCRHEQGEIFAAEGYAKAAGRVGVCIATSGPGATNLVTGL
Sbjct: 121 GGASMEIHQALTRSDRITNVLCRHEQGEIFAAEGYAKAAGRVGVCIATSGPGATNLVTGL 180

Query: 567 ADAMMDSIPLVAITGQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAF 746
           ADAMMDSIPLVAITGQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAF
Sbjct: 181 ADAMMDSIPLVAITGQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAF 240

Query: 747 YLARTGRPGPVLVDVPKDIQQQLAVPDWEAPMSITGYI 860
           YLARTGRPGPVLVDVPKDIQQQLAVPDWEAPMSITGYI
Sbjct: 241 YLARTGRPGPVLVDVPKDIQQQLAVPDWEAPMSITGYI 278

>pir||T07968 acetolactate synthase (EC 4.1.3.18) - Volvox carteri
           gi|2565317|gb|AAB88296.1| acetolactate synthase [Volvox
           carteri]
          Length = 681

 Score =  442 bits (1137), Expect = e-123
 Identities = 227/264 (85%), Positives = 239/264 (89%), Gaps = 1/264 (0%)
 Frame = +3

Query: 72  GCVSPAPRPVPMSSQTMIPSTSSPATRAPARSGRRALAVSAKLADGS-RRMQSEEVRRAK 248
           GC +P   PV +     +   S+ A+R  AR  R  +   AKLADGS RRMQSEEVRRAK
Sbjct: 14  GCGTPIQHPVLLLPHKALLPYSTAASRQAARPARVCVTAYAKLADGSARRMQSEEVRRAK 73

Query: 249 EVAQAALAKDSPADWVDRYGSEPRKGADILVQALEREGVDSVFAYPGGASMEIHQALTRS 428
           EVAQAALAK+SPADWVDR+GSEPRKGADILVQ LEREGVD+VFAYPGGASMEIHQALTRS
Sbjct: 74  EVAQAALAKESPADWVDRFGSEPRKGADILVQCLEREGVDNVFAYPGGASMEIHQALTRS 133

Query: 429 DRITNVLCRHEQGEIFAAEGYAKAAGRVGVCIATSGPGATNLVTGLADAMMDSIPLVAIT 608
           DRITNVLCRHEQGEIFAAEGYAKA+GRVGVCIATSGPGATNLVTGLADAMMDSIPLVAIT
Sbjct: 134 DRITNVLCRHEQGEIFAAEGYAKASGRVGVCIATSGPGATNLVTGLADAMMDSIPLVAIT 193

Query: 609 GQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAFYLARTGRPGPVLVD 788
           GQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAFYLARTGRPGPVLVD
Sbjct: 194 GQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAFYLARTGRPGPVLVD 253

Query: 789 VPKDIQQQLAVPDWEAPMSITGYI 860
           VPKDIQQQLAVPDW++PMSITGYI
Sbjct: 254 VPKDIQQQLAVPDWDSPMSITGYI 277

>pir||T08085 acetolactate synthase (EC 4.1.3.18) precursor - Volvox carteri
           gi|2921777|gb|AAC04854.1| acetolactate synthase [Volvox
           carteri]
          Length = 681

 Score =  432 bits (1110), Expect = e-120
 Identities = 221/264 (83%), Positives = 236/264 (88%), Gaps = 1/264 (0%)
 Frame = +3

Query: 72  GCVSPAPRPVPMSSQTMIPSTSSPATRAPARSGRRALAVSAKLADGS-RRMQSEEVRRAK 248
           GC +P   PV +     +   S+ A+R  AR  R  +   AKLADGS RRMQSEEVRRAK
Sbjct: 14  GCGTPIQHPVLLLPHKALLPYSTAASRQAARPARVCVTAYAKLADGSARRMQSEEVRRAK 73

Query: 249 EVAQAALAKDSPADWVDRYGSEPRKGADILVQALEREGVDSVFAYPGGASMEIHQALTRS 428
           EVAQAALAK+SPADWVDR+GSEPRKGADIL+Q LEREGVD+VFAYPGGASMEIHQALTRS
Sbjct: 74  EVAQAALAKESPADWVDRFGSEPRKGADILIQCLEREGVDNVFAYPGGASMEIHQALTRS 133

Query: 429 DRITNVLCRHEQGEIFAAEGYAKAAGRVGVCIATSGPGATNLVTGLADAMMDSIPLVAIT 608
           DRITNVLCRHEQGEIF+AEGYAKA+GRVGVCIATSGPGATNLVT L DAMMDSI L+AIT
Sbjct: 134 DRITNVLCRHEQGEIFSAEGYAKASGRVGVCIATSGPGATNLVTRLDDAMMDSITLIAIT 193

Query: 609 GQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAFYLARTGRPGPVLVD 788
           GQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAFYLARTGRPGPVLVD
Sbjct: 194 GQVPRRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAFYLARTGRPGPVLVD 253

Query: 789 VPKDIQQQLAVPDWEAPMSITGYI 860
           VPKDIQQQLAVPDW++PMSITGYI
Sbjct: 254 VPKDIQQQLAVPDWDSPMSITGYI 277

>gb|AAK50821.1|AF363370_1 acetolactate synthase [Amaranthus powellii]
          Length = 669

 Score =  322 bits (824), Expect = 7e-87
 Identities = 164/260 (63%), Positives = 203/260 (78%), Gaps = 3/260 (1%)
 Frame = +3

Query: 90  PRPVP--MSSQTMIPSTSSPATRAPARSGRRALAVSAKLADGSRRMQSEEVRRAKEVAQA 263
           P  +P   SS   IP ++S    + +   RR L +S+     S+  + +        + +
Sbjct: 16  PNKIPNLQSSIYAIPFSNSLKPTSSSSILRRPLQISSS---SSQSPKPKPPSATITQSPS 72

Query: 264 ALAKDSPADWVDRYG-SEPRKGADILVQALEREGVDSVFAYPGGASMEIHQALTRSDRIT 440
           +L  D P+ +V R+   EPRKG D+LV+ALEREGV  VFAYPGGASMEIHQALTRS+ I 
Sbjct: 73  SLTDDKPSSFVSRFSPEEPRKGCDVLVEALEREGVTDVFAYPGGASMEIHQALTRSNIIR 132

Query: 441 NVLCRHEQGEIFAAEGYAKAAGRVGVCIATSGPGATNLVTGLADAMMDSIPLVAITGQVP 620
           NVL RHEQG +FAAEGYA+A GRVGVCIATSGPGATNLV+GLADA++DS+PLVAITGQVP
Sbjct: 133 NVLPRHEQGGVFAAEGYARATGRVGVCIATSGPGATNLVSGLADALLDSVPLVAITGQVP 192

Query: 621 RRMIGTDAFQETPIVEVTRAITKHNYLVLDIKDLPRVIKEAFYLARTGRPGPVLVDVPKD 800
           RRMIGTDAFQETPIVEVTR+ITKHNYLVLD++D+PR++KEAF+LA +GRPGPVL+D+PKD
Sbjct: 193 RRMIGTDAFQETPIVEVTRSITKHNYLVLDVEDIPRIVKEAFFLANSGRPGPVLIDIPKD 252

Query: 801 IQQQLAVPDWEAPMSITGYI 860
           IQQQL VP+WE P+ + GY+
Sbjct: 253 IQQQLVVPNWEQPIKLGGYL 272



EST assemble image


clone accession position
1 MXL076c11_r BP097474 1 356
2 CL33b07_r AV394982 2 557
3 HC087a10_r AV638492 305 772
4 LCL066a07_r AV629779 415 861




Chlamydomonas reinhardtii
Kazusa DNA Research Institute