>KCC000481A_C01 KCC000481A_c01
gggcaacgacgctgcaccagcGAGTGGCCTTCTTCTCAGCGGCGAGCAACAGCGCTTTAA
AACCAGGGAACACGGCCATTTGCAGCGCTGATACACTCATACAAGACCAACATCACCTGT
GCGGGAGGTCGCTCGAGCCGGGGCAGCGGTGCGCCGTTGGTCGACATGACGCGTTCAGAG
CAGCAACTATTGTCGGGCTATGAGCATCAATATCTGGACTCAAGATGCTCCGATACAATT
ACGCAGGCACAGATGATACTTCTCCTGCCTGGCGCGTGGGCCTTGGGGGAAGGCCTGGAG
ATTGAGATGCCCTGTCCCGTGGCCCCTGACCCCGACTGGACTAGCAACAGCTCGCCTCTC
CCGCAACCCCAGCACTGCGCCTGCTGCCACGAGCAG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000481A_C01 KCC000481A_c01
         (396 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAH36187.1| SRRM1 protein [Homo sapiens]                            35  0.33
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-...    35  0.33
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote...    35  0.33
gb|AAL11913.1| scFV single-chain antibody ZG1 [synthetic construct]    34  0.43
ref|NP_642792.1| adenosylmethionine-8-amino-7-oxononanoate amino...    33  0.73

>gb|AAH36187.1| SRRM1 protein [Homo sapiens]
          Length = 904

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 23/70 (32%), Positives = 32/70 (44%), Gaps = 3/70 (4%)
 Frame = -3

Query: 391 RGSRRSAGVAGEASCC*SSRGQGPRDRASQSPGLPPRPTRQAGEVSSVPA*LYR---SIL 221
           R  R SA ++G +S   SSR + P  +  +    PPR TR+    +S P   +R      
Sbjct: 347 RRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPAT 406

Query: 220 SPDIDAHSPT 191
            P    HSPT
Sbjct: 407 PPPKTRHSPT 416

>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
           serine/arginine repetitive matrix protein 1 [Mus
           musculus] gi|3153821|gb|AAC17422.1|
           plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
           musculus]
          Length = 897

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 23/70 (32%), Positives = 32/70 (44%), Gaps = 3/70 (4%)
 Frame = -3

Query: 391 RGSRRSAGVAGEASCC*SSRGQGPRDRASQSPGLPPRPTRQAGEVSSVPA*LYR---SIL 221
           R  R SA ++G +S   SSR + P  +  +    PPR TR+    +S P   +R      
Sbjct: 345 RRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPAT 404

Query: 220 SPDIDAHSPT 191
            P    HSPT
Sbjct: 405 PPPKTRHSPT 414

>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
           plenty-of-prolines-101; serine/arginine repetitive
           matrix protein 1 [Rattus norvegicus]
          Length = 958

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 23/70 (32%), Positives = 32/70 (44%), Gaps = 3/70 (4%)
 Frame = -3

Query: 391 RGSRRSAGVAGEASCC*SSRGQGPRDRASQSPGLPPRPTRQAGEVSSVPA*LYR---SIL 221
           R  R SA ++G +S   SSR + P  +  +    PPR TR+    +S P   +R      
Sbjct: 404 RRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPAT 463

Query: 220 SPDIDAHSPT 191
            P    HSPT
Sbjct: 464 PPPKTRHSPT 473

>gb|AAL11913.1| scFV single-chain antibody ZG1 [synthetic construct]
          Length = 237

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 22/67 (32%), Positives = 29/67 (42%), Gaps = 10/67 (14%)
 Frame = -2

Query: 395 CSWQQAQCWGC-GRGELLLVQSGSGATGQG---------ISISRPSPKAHAPGRRSIICA 246
           C+    Q W C G+G L+ V SG G +G G         + +    P A A    SI   
Sbjct: 96  CARHSGQLWPCWGQGTLVTVSSGGGGSGGGGSGGGGSALLPVLTQPPSASALLGASIKLT 155

Query: 245 CVIVSEH 225
           C + SEH
Sbjct: 156 CTLSSEH 162

>ref|NP_642792.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Xanthomonas axonopodis pv. citri str. 306]
           gi|21108738|gb|AAM37328.1|
           adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 455

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
 Frame = +3

Query: 39  AASNSALKPG--------NTAICSADTLIQDQHHLCGRSLEPGQRCAVGRHDAFRAATIV 194
           AA  + L PG        N+   + DT+++   H      +P +R  +GRHD +   T+ 
Sbjct: 99  AAKLAELAPGDLNHAFFANSGSEANDTILRLVRHFWAVQGQPQKRIFIGRHDGYHGTTMA 158

Query: 195 GL*ASISGLKMLRYN----YAGTDDTSPAWRVGLGG 290
           G  AS+ G++ +        A     +P +  G GG
Sbjct: 159 G--ASLGGMRGMHQQGGLPIADIHHVAPPYHFGDGG 192

EST assemble image

clone accession position 1 CL32g02_r AV394873 1 349 2 HCL036f10_r AV641580 22 396

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