Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000480A_C01 KCC000480A_c01
(908 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_596300.1| dna-directed rna polymerase i 190 kd polypeptid... 152 1e-35
emb|CAA32887.1| unnamed protein product [Schizosaccharomyces pombe] 150 2e-35
ref|NP_033114.2| RNA polymerase 1-4; RNA polymerase 1-4 (194 kDa... 134 2e-30
sp|O35134|RPA1_MOUSE DNA-directed RNA polymerase I largest subun... 134 2e-30
gb|AAL56846.1|AF309686_1 RNA polymerase I large subunit [Xenopus... 134 2e-30
>ref|NP_596300.1| dna-directed rna polymerase i 190 kd polypeptide [Schizosaccharomyces
pombe] gi|3334489|sp|P15398|RPA1_SCHPO DNA-directed RNA
polymerase I 190 kDa polypeptide gi|82799|pir||JS0080
DNA-directed RNA polymerase (EC 2.7.7.6) I 189K chain -
fission yeast (Schizosaccharomyces pombe)
gi|173433|gb|AAA35326.1| RNA polymerase I largest subunit
gi|2832886|emb|CAA16827.1| nuc1 [Schizosaccharomyces
pombe]
Length = 1689
Score = 152 bits (383), Expect = 1e-35
Identities = 74/114 (64%), Positives = 88/114 (76%)
Frame = -2
Query: 904 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 725
TND+ A+L YGVEAAR I+ EV SVF YGI VDPRHLSLIAD+MT +GGY+A NR+G
Sbjct: 1566 TNDIAAILRIYGVEAARNAIVHEVSSVFGVYGIAVDPRHLSLIADYMTFEGGYKAFNRMG 1625
Query: 724 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVEL 563
IE + SPF KMSFET HFLT+A LRG VDDL +P++RL VGRV GTG ++
Sbjct: 1626 IEYNTSPFAKMSFETTCHFLTEAALRGDVDDLSNPSSRLVVGRVGNFGTGSFDI 1679
>emb|CAA32887.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 1689
Score = 150 bits (380), Expect = 2e-35
Identities = 73/118 (61%), Positives = 88/118 (73%)
Frame = -2
Query: 904 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 725
TND+ A+L YGVEA R I+ EV SVF YGI VDPRHLSLIAD+MT +GGY+A NR+G
Sbjct: 1566 TNDIAAILRIYGVEATRNAIVHEVSSVFGVYGIAVDPRHLSLIADYMTFEGGYKAFNRMG 1625
Query: 724 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 551
IE + SPF KMSFET HFLT+A LRG VDDL +P++RL VGRV GTG ++ +
Sbjct: 1626 IEYNTSPFAKMSFETTCHFLTEAALRGDVDDLSNPSSRLVVGRVGNFGTGSFDIFNPV 1683
>ref|NP_033114.2| RNA polymerase 1-4; RNA polymerase 1-4 (194 kDa subunit) [Mus
musculus] gi|31753226|gb|AAH53744.1| RNA polymerase 1-4
[Mus musculus]
Length = 1717
Score = 134 bits (338), Expect = 2e-30
Identities = 66/118 (55%), Positives = 87/118 (72%)
Frame = -2
Query: 904 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 725
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1599 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1658
Query: 724 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 551
I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q +
Sbjct: 1659 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1716
>sp|O35134|RPA1_MOUSE DNA-directed RNA polymerase I largest subunit (RNA polymerase I 194
kDa subunit) (RPA194) gi|7513630|pir||T13961 DNA-directed
RNA polymerase (EC 2.7.7.6) I large chain - mouse
gi|2330007|gb|AAB66718.1| RNA polymerase I largest
subunit [Mus musculus]
Length = 1717
Score = 134 bits (338), Expect = 2e-30
Identities = 66/118 (55%), Positives = 87/118 (72%)
Frame = -2
Query: 904 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 725
+ND+HAM TYG+EAA I +E++ VF+ YGI VDPRHLSL+AD+M +G Y+ NR G
Sbjct: 1599 SNDIHAMANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFG 1658
Query: 724 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQQI 551
I+SS SP +M+FET+ FL AT+ GS D+LKSP+A L VG+VV+ GTG EL Q +
Sbjct: 1659 IQSSSSPLQQMTFETSFQFLKQATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPL 1716
>gb|AAL56846.1|AF309686_1 RNA polymerase I large subunit [Xenopus laevis]
Length = 1730
Score = 134 bits (337), Expect = 2e-30
Identities = 64/116 (55%), Positives = 89/116 (76%)
Frame = -2
Query: 904 TNDVHAMLVTYGVEAARATIMREVQSVFSAYGIGVDPRHLSLIADFMTHQGGYRACNRIG 725
+ND+HA+ T+G+EAA + +E++ VF+ YGI VDPRHLSL+AD+M +G YR NRIG
Sbjct: 1612 SNDIHAIANTFGIEAALRVVEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGTYRPLNRIG 1671
Query: 724 IESSVSPFLKMSFETAAHFLTDATLRGSVDDLKSPAARLCVGRVVELGTGCVELVQ 557
++SS SPF +M+FET+ FL DAT+ G+ DDL+SP+A L VG+VV+ GTG +L Q
Sbjct: 1672 MQSSSSPFQQMTFETSYKFLKDATMNGARDDLQSPSACLVVGKVVKGGTGLFDLKQ 1727