Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000475A_C01 KCC000475A_c01
(365 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00092881.1| hypothetical protein [Azotobacter vinelandii] 39 0.024
ref|NP_902121.1| hypothetical protein CV2451 [Chromobacterium vi... 38 0.041
ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens] 30 0.048
ref|NP_826642.1| hypothetical protein [Streptomyces avermitilis ... 37 0.091
ref|ZP_00139943.1| hypothetical protein [Pseudomonas aeruginosa ... 36 0.12
>ref|ZP_00092881.1| hypothetical protein [Azotobacter vinelandii]
Length = 243
Score = 38.5 bits (88), Expect = 0.024
Identities = 30/77 (38%), Positives = 34/77 (43%), Gaps = 7/77 (9%)
Frame = +1
Query: 139 GDQPVRRVRHKAVAARVSEAHAGGARRL-------HPARQRRRAR*VRPRTTARTVPMPS 297
G +PVRR +AV R + A GARRL P RRRAR PR AR
Sbjct: 4 GPRPVRRRERRAVD-RHAAGRAAGARRLAAGVPRRRPRNPRRRARRADPRGPARAAGRTG 62
Query: 298 RSTSAAVAATRRAPPRA 348
+ A RR PRA
Sbjct: 63 GRSGRARRPVRRPRPRA 79
>ref|NP_902121.1| hypothetical protein CV2451 [Chromobacterium violaceum ATCC 12472]
gi|34103761|gb|AAQ60122.1| hypothetical protein CV2451
[Chromobacterium violaceum ATCC 12472]
Length = 247
Score = 37.7 bits (86), Expect = 0.041
Identities = 26/61 (42%), Positives = 29/61 (46%), Gaps = 9/61 (14%)
Frame = -3
Query: 363 PRHPPRPRRRPPC---------CRHGGAGAAAWHRHRPRRRPGPHLSRSSSLSCWMETPC 211
P PP PR R PC CR AGAA R PRRR G SR ++ CW T C
Sbjct: 77 PSQPPGPRNRSPCRTARSRRWRCRR-RAGAA---RALPRRRSGAG-SRPAAPGCWPRTDC 131
Query: 210 T 208
+
Sbjct: 132 S 132
>ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]
Length = 250
Score = 30.4 bits (67), Expect(2) = 0.048
Identities = 23/68 (33%), Positives = 29/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 PGDSAVEFAFRRIPKTTLPEELPKRRSDRPWRPTCAPSAA*SCRGPSIRSTCRR-CTASP 224
PG + + RR P P P R S R PT +P+ R P S R TASP
Sbjct: 54 PGRTPPRASPRRTPPRASPRRAPPRASPRRTPPTASPT-----RTPPTESPARTPPTASP 108
Query: 225 SSTTATTS 248
+ T + S
Sbjct: 109 ARTPSRAS 116
Score = 26.2 bits (56), Expect(2) = 0.048
Identities = 21/47 (44%), Positives = 24/47 (50%), Gaps = 2/47 (4%)
Frame = +1
Query: 226 PARQRRRAR*VRPRTTARTVPMPSRSTSAAVAATRRAPPRA--RRVP 360
PAR RA PR RT P S + + A+ RR PPRA RR P
Sbjct: 108 PARTPSRAS---PR---RTPPRASPTRTPPRASPRRTPPRASPRRTP 148
>ref|NP_826642.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29609126|dbj|BAC73177.1| hypothetical protein
[Streptomyces avermitilis MA-4680]
Length = 1387
Score = 36.6 bits (83), Expect = 0.091
Identities = 38/120 (31%), Positives = 48/120 (39%), Gaps = 3/120 (2%)
Frame = +3
Query: 15 TQSTNEALKVFPGDSAVEFAFRRIPKTTLPEELPKRRSDRPWRPTCAPSAA*SCRGPSIR 194
T+ T EA P + A + P +R + R P AP AA S
Sbjct: 81 TEETEEAAVAEPAEVAAA------TEDAAPRRTRRRATRRVSAPAGAPEAAESATAAETD 134
Query: 195 STCRRCTASPSSTTATTSAISEAPDDGEDGAD--AKPQ-HQRRRGGNKEGAAEGAEGAEE 365
S A+ S T AT SA AP+ GE A+ A P+ RRR + A GA A E
Sbjct: 135 S------AAESVTAATGSAEVSAPETGEAAAEEEAAPKGRTRRRATRRASAPAGAPKAAE 188
Score = 32.3 bits (72), Expect = 1.7
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Frame = +3
Query: 153 APSAA*SCRGPSIRSTCRRCTASPSSTTATTSAISEAPD--------DGEDGADAKPQHQ 308
A S A S G R P++ TAT + E + DG++ + + +
Sbjct: 404 ARSGAGSTAGSRRRRRRGGAEDEPAAVTATEDVVEETEEAEEAEDSVDGDEAEETGSRRR 463
Query: 309 RRRGGNKEGAAEGAEGAEE 365
RRRGG + E A+ +E
Sbjct: 464 RRRGGRRRRRGESADADDE 482
Score = 31.2 bits (69), Expect = 3.8
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 18/111 (16%)
Frame = +3
Query: 87 PKTTLPEELPKRRSDRPWRP----------------TCAPSAA*SCRGPSIRSTCRRCTA 218
P TLP +R + RP P A + A R I T A
Sbjct: 16 PSDTLPPRRRRRAASRPAGPPAAVAETATGATAPAEAAAETTAPITRPADIAETAEDAEA 75
Query: 219 SPSSTTATT--SAISEAPDDGEDGADAKPQHQRRRGGNKEGAAEGAEGAEE 365
+ ++ T T +A++E + DA P+ RRR + A GA A E
Sbjct: 76 AEAAGTEETEEAAVAEPAEVAAATEDAAPRRTRRRATRRVSAPAGAPEAAE 126
>ref|ZP_00139943.1| hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 790
Score = 36.2 bits (82), Expect = 0.12
Identities = 38/104 (36%), Positives = 46/104 (43%), Gaps = 1/104 (0%)
Frame = +1
Query: 55 TLLSSSRFDEFPKQRFRKSCLSVGRIGHGDQPVRRVRHKAVAARVSEAHAGGARRL-HPA 231
TLL++ + ++R L R+G G +P R R A A R A G RL PA
Sbjct: 143 TLLAAGGYPRTAQER----ALVRQRLGPGARPGAR-RAAAGAGRQPRPPARGTTRLARPA 197
Query: 232 RQRRRAR*VRPRTTARTVPMPSRSTSAAVAATRRAPPRARRVPR 363
R RR R R TAR VP P R+ A V R P R R
Sbjct: 198 RARR----ARRRRTARAVP-PGRAALATVLRGRLRPAGGRGAER 236
