Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000474A_C01 KCC000474A_c01
(575 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00092630.1| COG0810: Periplasmic protein TonB, links inne... 46 4e-04
gb|AAP82644.1| Hypothetical protein R144.4a [Caenorhabditis eleg... 44 0.001
ref|NP_741122.1| actin-binding WH2 (3G109) [Caenorhabditis elegans] 44 0.001
gb|AAP82645.1| Hypothetical protein R144.4b [Caenorhabditis eleg... 44 0.001
ref|NP_741123.1| actin-binding WH2 (3G109) [Caenorhabditis elegans] 44 0.001
>ref|ZP_00092630.1| COG0810: Periplasmic protein TonB, links inner and outer membranes
[Azotobacter vinelandii]
Length = 286
Score = 45.8 bits (107), Expect = 4e-04
Identities = 48/156 (30%), Positives = 58/156 (36%), Gaps = 4/156 (2%)
Frame = -1
Query: 572 SSPARSTRPAPPAPAAPACGRTLPPPPLPQGRRRALSPALSEIRIAPAPRISYGCARSNH 393
SSPA P P P PA PPPP P A A + PR +
Sbjct: 94 SSPAPPAEPVEPTPPPPAVAAPEPPPPPPVVEELAPRKAPPKPPKPQPPRQKAEAKPART 153
Query: 392 QYALVSPCRIPVAPSSRA-W*RPAPAPRLP*HASPEPRQAPALAGTVGRTLEETPV*LAP 216
A P AP + A PAPAP P ++P P QAP + G + P AP
Sbjct: 154 PPAKAEAPPAPTAPPAPAPAPAPAPAPAAP-TSAPAPAQAPLTPPSAGAGYLKNP---AP 209
Query: 215 SVVASSWQHDWFPSYCQRA---ACGPFGAFRVWLSS 117
A + + +W S R A G RV SS
Sbjct: 210 EYPALALRRNWEGSVLLRVHVLASGRPSEIRVQQSS 245
>gb|AAP82644.1| Hypothetical protein R144.4a [Caenorhabditis elegans]
Length = 360
Score = 44.3 bits (103), Expect = 0.001
Identities = 38/104 (36%), Positives = 44/104 (41%), Gaps = 8/104 (7%)
Frame = -1
Query: 572 SSPARSTRPAPPAPAAPACGRTLPPPPLP-----QGRRRALSPALSEI---RIAPAPRIS 417
+S R RP P PA PA PPPP+P Q R SPA+S P PRI+
Sbjct: 220 TSATRLARPLAPPPARPAA----PPPPVPTPSIAQMSSRFQSPAISRTLDDAPPPPPRIA 275
Query: 416 YGCARSNHQYALVSPCRIPVAPSSRAW*RPAPAPRLP*HASPEP 285
+ + P APS A PAP P P ASP P
Sbjct: 276 SKTSVAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYP 319
Score = 32.7 bits (73), Expect = 3.7
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Frame = -1
Query: 572 SSPARSTRPAPPAPAAPACGRTLPPPPLPQGRRRALSPALSEIR-IAPAPRISYGCARSN 396
+S A P PP + P+ T PPPP Q + + +R + PA + R +
Sbjct: 151 TSSAPPPPPPPPPVSVPSSKPTPPPPPPAQQKPSSDREQFRTMRPLRPANDVKPTMYRRS 210
Query: 395 HQYALVSPCRIPVAPSSRAW*RP-APAPRLP*HASPEPRQAPALA--------GTVGRTL 243
S IP A S+ RP AP P P A P P P++A + RTL
Sbjct: 211 G-----SSEDIPQATSATRLARPLAPPPARP-AAPPPPVPTPSIAQMSSRFQSPAISRTL 264
Query: 242 EETP 231
++ P
Sbjct: 265 DDAP 268
>ref|NP_741122.1| actin-binding WH2 (3G109) [Caenorhabditis elegans]
Length = 378
Score = 44.3 bits (103), Expect = 0.001
Identities = 38/104 (36%), Positives = 44/104 (41%), Gaps = 8/104 (7%)
Frame = -1
Query: 572 SSPARSTRPAPPAPAAPACGRTLPPPPLP-----QGRRRALSPALSEI---RIAPAPRIS 417
+S R RP P PA PA PPPP+P Q R SPA+S P PRI+
Sbjct: 222 TSATRLARPLAPPPARPAA----PPPPVPTPSIAQMSSRFQSPAISRTLDDAPPPPPRIA 277
Query: 416 YGCARSNHQYALVSPCRIPVAPSSRAW*RPAPAPRLP*HASPEP 285
+ + P APS A PAP P P ASP P
Sbjct: 278 SKTSVAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYP 321
Score = 34.3 bits (77), Expect = 1.3
Identities = 36/127 (28%), Positives = 51/127 (39%), Gaps = 16/127 (12%)
Frame = -1
Query: 563 ARSTRPAPPAPAAPA---CGRTLPPPPLPQGRRRALSPALSEIR----IAPAPRISYGCA 405
A S+ P PP P P + PPPP P ++ + + R + PA +
Sbjct: 150 ATSSAPPPPPPPPPVSVPSSKPTPPPPPPAQQKPSFQSDREQFRTMRPLRPANDVKPTMY 209
Query: 404 RSNHQYALVSPCRIPVAPSSRAW*RP-APAPRLP*HASPEPRQAPALA--------GTVG 252
R + S IP A S+ RP AP P P A P P P++A +
Sbjct: 210 RRSG-----SSEDIPQATSATRLARPLAPPPARP-AAPPPPVPTPSIAQMSSRFQSPAIS 263
Query: 251 RTLEETP 231
RTL++ P
Sbjct: 264 RTLDDAP 270
>gb|AAP82645.1| Hypothetical protein R144.4b [Caenorhabditis elegans]
Length = 362
Score = 44.3 bits (103), Expect = 0.001
Identities = 38/104 (36%), Positives = 44/104 (41%), Gaps = 8/104 (7%)
Frame = -1
Query: 572 SSPARSTRPAPPAPAAPACGRTLPPPPLP-----QGRRRALSPALSEI---RIAPAPRIS 417
+S R RP P PA PA PPPP+P Q R SPA+S P PRI+
Sbjct: 222 TSATRLARPLAPPPARPAA----PPPPVPTPSIAQMSSRFQSPAISRTLDDAPPPPPRIA 277
Query: 416 YGCARSNHQYALVSPCRIPVAPSSRAW*RPAPAPRLP*HASPEP 285
+ + P APS A PAP P P ASP P
Sbjct: 278 SKTSVAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYP 321
Score = 34.3 bits (77), Expect = 1.3
Identities = 36/127 (28%), Positives = 51/127 (39%), Gaps = 16/127 (12%)
Frame = -1
Query: 563 ARSTRPAPPAPAAPA---CGRTLPPPPLPQGRRRALSPALSEIR----IAPAPRISYGCA 405
A S+ P PP P P + PPPP P ++ + + R + PA +
Sbjct: 150 ATSSAPPPPPPPPPVSVPSSKPTPPPPPPAQQKPSFQSDREQFRTMRPLRPANDVKPTMY 209
Query: 404 RSNHQYALVSPCRIPVAPSSRAW*RP-APAPRLP*HASPEPRQAPALA--------GTVG 252
R + S IP A S+ RP AP P P A P P P++A +
Sbjct: 210 RRSG-----SSEDIPQATSATRLARPLAPPPARP-AAPPPPVPTPSIAQMSSRFQSPAIS 263
Query: 251 RTLEETP 231
RTL++ P
Sbjct: 264 RTLDDAP 270
>ref|NP_741123.1| actin-binding WH2 (3G109) [Caenorhabditis elegans]
Length = 376
Score = 44.3 bits (103), Expect = 0.001
Identities = 38/104 (36%), Positives = 44/104 (41%), Gaps = 8/104 (7%)
Frame = -1
Query: 572 SSPARSTRPAPPAPAAPACGRTLPPPPLP-----QGRRRALSPALSEI---RIAPAPRIS 417
+S R RP P PA PA PPPP+P Q R SPA+S P PRI+
Sbjct: 220 TSATRLARPLAPPPARPAA----PPPPVPTPSIAQMSSRFQSPAISRTLDDAPPPPPRIA 275
Query: 416 YGCARSNHQYALVSPCRIPVAPSSRAW*RPAPAPRLP*HASPEP 285
+ + P APS A PAP P P ASP P
Sbjct: 276 SKTSVAPTSSRAPLPPSSSFAPSISASPAPAPPPPPPQAASPYP 319
Score = 32.7 bits (73), Expect = 3.7
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Frame = -1
Query: 572 SSPARSTRPAPPAPAAPACGRTLPPPPLPQGRRRALSPALSEIR-IAPAPRISYGCARSN 396
+S A P PP + P+ T PPPP Q + + +R + PA + R +
Sbjct: 151 TSSAPPPPPPPPPVSVPSSKPTPPPPPPAQQKPSSDREQFRTMRPLRPANDVKPTMYRRS 210
Query: 395 HQYALVSPCRIPVAPSSRAW*RP-APAPRLP*HASPEPRQAPALA--------GTVGRTL 243
S IP A S+ RP AP P P A P P P++A + RTL
Sbjct: 211 G-----SSEDIPQATSATRLARPLAPPPARP-AAPPPPVPTPSIAQMSSRFQSPAISRTL 264
Query: 242 EETP 231
++ P
Sbjct: 265 DDAP 268
