Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000469A_C01 KCC000469A_c01
(1001 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_328545.1| hypothetical protein [Neurospora crassa] gi|289... 420 e-116
dbj|BAB90281.1| putative RNA helicase [Oryza sativa (japonica cu... 416 e-115
ref|NP_568964.1| ethylene-responsive DEAD box RNA helicase, puta... 404 e-111
dbj|BAB10554.1| ATP-dependent RNA helicase-like protein [Arabido... 404 e-111
dbj|BAB56090.1| putative ethylene-responsive RNA helicase [Oryza... 400 e-110
>ref|XP_328545.1| hypothetical protein [Neurospora crassa] gi|28924605|gb|EAA33724.1|
hypothetical protein [Neurospora crassa]
Length = 651
Score = 420 bits (1079), Expect = e-116
Identities = 210/318 (66%), Positives = 246/318 (77%)
Frame = +2
Query: 47 FMSHYSSHGRGDDRWGGGGSSYGGGGGSSRWDSGGHGGGGGGGGFNTRGGRDDLDRMALP 226
+ ++YSSHG G + +GGGG YGGGGG + GG+GGGGGG + G +
Sbjct: 31 YSNNYSSHG-GSNGYGGGGGGYGGGGGG--YGGGGYGGGGGGDRMSALGAG-----LQKQ 82
Query: 227 RPDFTNLPKFEKCFYLEHPAVSGRTPEEVEQYRREKQIHVYGDGVPKPVKTFEEASFPEY 406
D + LPKFEK FY EHP+V+ R+P EV+++R + I V+G+ VPKPV+TF+EA FP Y
Sbjct: 83 NWDMSALPKFEKSFYQEHPSVANRSPAEVDKFRADHSIAVFGNNVPKPVETFDEAGFPRY 142
Query: 407 VLEEVLRAGFKEPTPIQCQGWPMALLGRDLIGLAETGSGKTLAYLLPAVVHINAQPYLQS 586
V++EV GF PT IQ QGWPMAL GRD++G+AETGSGKTL Y LPA+VHINAQP L
Sbjct: 143 VMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAP 202
Query: 587 GDGPIVLVLAPTRELAVQIQQECQRFGASSRIKNTVVYGGAPKGPQARDLRGGVEIVIAT 766
GDGPIVL+LAPTRELAVQIQQE +FG SSRI+NT VYGG PKGPQ RDL GVE+ IAT
Sbjct: 203 GDGPIVLILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIAT 262
Query: 767 PGRLIDMLDSRITNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLLWSATWPK 946
PGRLIDML+S TNLRRVTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTL+WSATWPK
Sbjct: 263 PGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPK 322
Query: 947 EVQAIARDFLKDPYQVII 1000
EV+ +A DFL D QV I
Sbjct: 323 EVRNLAADFLTDFIQVNI 340
Score = 37.7 bits (86), Expect = 0.31
Identities = 19/35 (54%), Positives = 20/35 (56%), Gaps = 4/35 (11%)
Frame = +2
Query: 92 GGGGSSYGG----GGGSSRWDSGGHGGGGGGGGFN 184
GGGG +GG GGG R GG GGGG GG N
Sbjct: 608 GGGGGRFGGYRGRGGGGWRGGRGGGGGGGSVGGAN 642
Score = 33.5 bits (75), Expect = 5.9
Identities = 21/42 (50%), Positives = 23/42 (54%)
Frame = +2
Query: 50 MSHYSSHGRGDDRWGGGGSSYGGGGGSSRWDSGGHGGGGGGG 175
M+ YS G G R+GG GGG W GG GGGGGGG
Sbjct: 603 MARYSGGGGG--RFGGYRGRGGGG-----W-RGGRGGGGGGG 636
>dbj|BAB90281.1| putative RNA helicase [Oryza sativa (japonica cultivar-group)]
gi|20804948|dbj|BAB92627.1| putative RNA helicase [Oryza
sativa (japonica cultivar-group)]
Length = 480
Score = 416 bits (1068), Expect = e-115
Identities = 205/307 (66%), Positives = 244/307 (78%), Gaps = 6/307 (1%)
Frame = +2
Query: 98 GGSSYGGGGGSSRWDSGGHGGGGGGG---GFNTRGGRDDLDRMALPRPDFTNLPKFEKCF 268
GG GGG G W GG GGGG GG G GGRD LD ++LP+PDF +L FEK F
Sbjct: 61 GGRGRGGGAGGGGWGRGGGGGGGAGGYRGGGGRGGGRDALDSLSLPKPDFRSLIPFEKNF 120
Query: 269 YLEHPAVSGRTPEEVEQYRREKQIHVYGDGVPKPVKTFEEASFPEYVLEEVLRAGFKEPT 448
Y+E PAV + +V QYRR++ I V G VPKPV+ F+EA+FP+Y ++ + ++GF EPT
Sbjct: 121 YVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPT 180
Query: 449 PIQCQGWPMALLGRDLIGLAETGSGKTLAYLLPAVVHINAQPYLQSGDGPIVLVLAPTRE 628
PIQ QGWPMAL GRD+IG+A+TGSGKTL+YLLP +VH+ AQP L+ GDGPIVL+LAPTRE
Sbjct: 181 PIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRE 240
Query: 629 LAVQIQQECQRFGASSRIKNTVVYGGAPKGPQARDLRGGVEIVIATPGRLIDMLDSRITN 808
LAVQIQQE +FG+ SR ++T +YGGAPKGPQ RDLR GVEIVIATPGRLIDML+ TN
Sbjct: 241 LAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTN 300
Query: 809 LRRVTYLVLDEADRMLDMGFEPQIRKIVDQ---IRPDRQTLLWSATWPKEVQAIARDFLK 979
LRRVTYLVLDEADRMLDMGFEPQIRKIV Q IRPDRQTL WSATWP+EV+++AR FL+
Sbjct: 301 LRRVTYLVLDEADRMLDMGFEPQIRKIVAQAWLIRPDRQTLYWSATWPREVESLARQFLQ 360
Query: 980 DPYQVII 1000
+PY+VII
Sbjct: 361 NPYKVII 367
>ref|NP_568964.1| ethylene-responsive DEAD box RNA helicase, putative [Arabidopsis
thaliana] gi|16974623|gb|AAL31214.1| AT5g63120/MDC12_8
[Arabidopsis thaliana] gi|23308415|gb|AAN18177.1|
At5g63120/MDC12_8 [Arabidopsis thaliana]
Length = 484
Score = 404 bits (1038), Expect = e-111
Identities = 203/312 (65%), Positives = 241/312 (77%)
Frame = +2
Query: 65 SHGRGDDRWGGGGSSYGGGGGSSRWDSGGHGGGGGGGGFNTRGGRDDLDRMALPRPDFTN 244
S GRG R GG YG G W GGGGG GG + R +LD ++LP+ +F N
Sbjct: 73 SVGRGGGR--GGYGQYGDRNGGGNW-----GGGGGRGGSSKR----ELDSVSLPKQNFGN 121
Query: 245 LPKFEKCFYLEHPAVSGRTPEEVEQYRREKQIHVYGDGVPKPVKTFEEASFPEYVLEEVL 424
L FEK FY+E P V T ++V YR E+ I V G VPKP+K F++A+FP+ +LE +
Sbjct: 122 LVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIA 181
Query: 425 RAGFKEPTPIQCQGWPMALLGRDLIGLAETGSGKTLAYLLPAVVHINAQPYLQSGDGPIV 604
+ GF EPTPIQ QGWPMAL GRDLIG+AETGSGKTLAYLLPA+VH++AQP L DGPIV
Sbjct: 182 KLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIV 241
Query: 605 LVLAPTRELAVQIQQECQRFGASSRIKNTVVYGGAPKGPQARDLRGGVEIVIATPGRLID 784
L+LAPTRELAVQIQ+E ++FG S +++T +YGGAPKGPQ RDLR GVEIVIATPGRLID
Sbjct: 242 LILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 301
Query: 785 MLDSRITNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLLWSATWPKEVQAIA 964
ML+ + TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTLLWSATWP+EV+ +A
Sbjct: 302 MLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLA 361
Query: 965 RDFLKDPYQVII 1000
R FL+DPY+ II
Sbjct: 362 RQFLRDPYKAII 373
>dbj|BAB10554.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length = 564
Score = 404 bits (1038), Expect = e-111
Identities = 203/312 (65%), Positives = 241/312 (77%)
Frame = +2
Query: 65 SHGRGDDRWGGGGSSYGGGGGSSRWDSGGHGGGGGGGGFNTRGGRDDLDRMALPRPDFTN 244
S GRG R GG YG G W GGGGG GG + R +LD ++LP+ +F N
Sbjct: 46 SVGRGGGR--GGYGQYGDRNGGGNW-----GGGGGRGGSSKR----ELDSVSLPKQNFGN 94
Query: 245 LPKFEKCFYLEHPAVSGRTPEEVEQYRREKQIHVYGDGVPKPVKTFEEASFPEYVLEEVL 424
L FEK FY+E P V T ++V YR E+ I V G VPKP+K F++A+FP+ +LE +
Sbjct: 95 LVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIA 154
Query: 425 RAGFKEPTPIQCQGWPMALLGRDLIGLAETGSGKTLAYLLPAVVHINAQPYLQSGDGPIV 604
+ GF EPTPIQ QGWPMAL GRDLIG+AETGSGKTLAYLLPA+VH++AQP L DGPIV
Sbjct: 155 KLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIV 214
Query: 605 LVLAPTRELAVQIQQECQRFGASSRIKNTVVYGGAPKGPQARDLRGGVEIVIATPGRLID 784
L+LAPTRELAVQIQ+E ++FG S +++T +YGGAPKGPQ RDLR GVEIVIATPGRLID
Sbjct: 215 LILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 274
Query: 785 MLDSRITNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLLWSATWPKEVQAIA 964
ML+ + TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTLLWSATWP+EV+ +A
Sbjct: 275 MLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLA 334
Query: 965 RDFLKDPYQVII 1000
R FL+DPY+ II
Sbjct: 335 RQFLRDPYKAII 346
>dbj|BAB56090.1| putative ethylene-responsive RNA helicase [Oryza sativa (japonica
cultivar-group)]
Length = 494
Score = 400 bits (1028), Expect = e-110
Identities = 200/280 (71%), Positives = 226/280 (80%)
Frame = +2
Query: 161 GGGGGGFNTRGGRDDLDRMALPRPDFTNLPKFEKCFYLEHPAVSGRTPEEVEQYRREKQI 340
GGG F D A D LP+FEK FY+E P+V+G T EEVE YRR ++I
Sbjct: 24 GGGTRAFAPTSKADS----AAAAADLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREI 79
Query: 341 HVYGDGVPKPVKTFEEASFPEYVLEEVLRAGFKEPTPIQCQGWPMALLGRDLIGLAETGS 520
V G VPKPV+ F + FPEYVL+E+ +AGF EPTPIQ QGWPMAL GRDLIG+AETGS
Sbjct: 80 TVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGS 139
Query: 521 GKTLAYLLPAVVHINAQPYLQSGDGPIVLVLAPTRELAVQIQQECQRFGASSRIKNTVVY 700
GKTLAYLLPA+VH+NAQP L GDGPIVLVLAPTRELAVQIQQE +FGASS+IK+T +Y
Sbjct: 140 GKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIY 199
Query: 701 GGAPKGPQARDLRGGVEIVIATPGRLIDMLDSRITNLRRVTYLVLDEADRMLDMGFEPQI 880
GG PKGPQ RDL+ GVEIVIATPGRLIDM++S TNLRRVTYLVLDEADRMLDMGFEPQI
Sbjct: 200 GGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEPQI 259
Query: 881 RKIVDQIRPDRQTLLWSATWPKEVQAIARDFLKDPYQVII 1000
+KIV QIRPDRQTL WSATWPKEV+ +AR+FL DPY+VII
Sbjct: 260 KKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVII 299
