KCC000468A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000468A_C01 KCC000468A_c01
cgctgtaactaCTGCGACCTTCTTAGAATAGACACTTATTTACACCTGGACATGCGTTAG
CATTTTTCACGCACTTAGCGCGGACTGAGACGCTGTTGAACGCTGCGCGGGAGCCATGGC
GGCAGATGACAGCCTGCTGCCTATTGCCATCCTCATAGACGAGCTCAAGAGCGATGAGCC
GCTTCGGCGACTCAATTCCATCAGCCGTCTGGGGCTTATAGCGCAGGCTCTGGGCGAGGA
GCGGACACGGGCAGAGCTCATTCCGTTCCTTAGCGACAATGTGGACGATGAGGACGAGGT
CCTGCTAGCCCAGGCGGAGCAGCTGGGGAACTTCGTGCCCTACGTGGGCGGGCCGCAGTA
TGCCTACCTCTTGCTGCCCCTGCTGGAGACGCTGTCGACGGTGGAGGAGACGGTGGTCCG
GGACAAGGCGGTGGAGTCTCTCAGCAAAGTAGGCTCGAACATGCCCGACAGCCACACATG
CGAGCACTTCGTTCCCATCATCAAGCGGCTGGGCTCCGGGGACTGGTTCACGTCTCGCGT
CTCGGCATGCGGCCTGTTCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000468A_C01 KCC000468A_c01
         (560 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_172790.2| serine/threonine protein phosphatase 2A regulat...   203  1e-51
pir||H86267 probable protein phosphotase 2a 65K chain - Arabidop...   203  1e-51
ref|NP_189208.1| serine/threonine protein phosphatase 2A, 65 KDa...   200  1e-50
pir||S51808 phosphoprotein phosphatase 2A 65K regulatory chain h...   200  1e-50
emb|CAB51803.1| phosphatase 2A regulatory A subunit [Oryza sativ...   197  1e-49

>ref|NP_172790.2| serine/threonine protein phosphatase 2A regulatory subunit,
           putative [Arabidopsis thaliana]
           gi|20466588|gb|AAM20611.1| protein phosphatase 2A
           regulatory subunit, putative [Arabidopsis thaliana]
           gi|27311991|gb|AAO00961.1| protein phosphatase 2A
           regulatory subunit, putative [Arabidopsis thaliana]
          Length = 587

 Score =  203 bits (516), Expect = 1e-51
 Identities = 99/145 (68%), Positives = 122/145 (83%)
 Frame = +2

Query: 125 DDSLLPIAILIDELKSDEPLRRLNSISRLGLIAQALGEERTRAELIPFLSDNVDDEDEVL 304
           D+ L PIA+LIDELK+D+  RRLNSI RL +IA+ALGEERTR ELIPFLS+N DD+DEVL
Sbjct: 5   DEPLYPIAVLIDELKNDDIQRRLNSIKRLSIIARALGEERTRKELIPFLSENNDDDDEVL 64

Query: 305 LAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVESLSKVGSNMPDSHTCE 484
           LA AE+LG F+ YVGG +YAY+LLP LETLSTVEET VR+KAV+SL ++G+ M +S   E
Sbjct: 65  LAMAEELGGFILYVGGVEYAYVLLPPLETLSTVEETCVREKAVDSLCRIGAQMRESDLVE 124

Query: 485 HFVPIIKRLGSGDWFTSRVSACGLF 559
           HF P+ KRL +G+WFT+RVSACG+F
Sbjct: 125 HFTPLAKRLSAGEWFTARVSACGIF 149

 Score = 40.4 bits (93), Expect = 0.016
 Identities = 38/145 (26%), Positives = 64/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 92  AVERCAGA---MAADDSLLPIAILIDELKSDEPLR-RLNSISRLGLIAQALGEERTRAEL 259
           AVE CA     +   D +  I  +I     D+  R R    ++L  + +A+G E TR +L
Sbjct: 222 AVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDL 281

Query: 260 IPFLSDNV-DDEDEVLLAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVE 436
           +P  +  + D+E EV +A A ++  F   +        +LP ++ LS+     VR     
Sbjct: 282 VPAYARLLCDNEAEVRIAAAGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALAS 341

Query: 437 SLSKVGSNMPDSHTCEHFVPIIKRL 511
            +  +   +    T EH +PI   L
Sbjct: 342 VIMGMAPVLGKDATIEHLLPIFLSL 366

 Score = 35.0 bits (79), Expect = 0.69
 Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
 Frame = +2

Query: 110 GAMAADDSLLPIAILIDELKSDEPLRRLNSISRLGLIAQALGEERTRAELIPFLSDNVDD 289
           G  A  + LLPI + +  LK + P  RLN IS+L  + Q +G +     L+P + +  +D
Sbjct: 351 GKDATIEHLLPIFLSL--LKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAED 408

Query: 290 ED-EVLLAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVESLSKVGSNMP 466
               V LA  E +      +G   +   L  L       +   +R+ A  +L ++     
Sbjct: 409 RHWRVRLAIIEYIPLLASQLGVGFFDEKLGALCMQWLQDKVHSIREAAANNLKRLAEEFG 468

Query: 467 DSHTCEHFVPIIKRLGSGDWFTSRVS 544
                +H VP +  + +   +  R++
Sbjct: 469 PEWAMQHIVPQVLEMINNPHYLYRMT 494

>pir||H86267 probable protein phosphotase 2a 65K chain - Arabidopsis thaliana
           gi|9958062|gb|AAG09551.1|AC011810_10 Putative protein
           phosphotase 2a 65kd regulatory subunit [Arabidopsis
           thaliana]
          Length = 591

 Score =  203 bits (516), Expect = 1e-51
 Identities = 99/145 (68%), Positives = 122/145 (83%)
 Frame = +2

Query: 125 DDSLLPIAILIDELKSDEPLRRLNSISRLGLIAQALGEERTRAELIPFLSDNVDDEDEVL 304
           D+ L PIA+LIDELK+D+  RRLNSI RL +IA+ALGEERTR ELIPFLS+N DD+DEVL
Sbjct: 5   DEPLYPIAVLIDELKNDDIQRRLNSIKRLSIIARALGEERTRKELIPFLSENNDDDDEVL 64

Query: 305 LAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVESLSKVGSNMPDSHTCE 484
           LA AE+LG F+ YVGG +YAY+LLP LETLSTVEET VR+KAV+SL ++G+ M +S   E
Sbjct: 65  LAMAEELGGFILYVGGVEYAYVLLPPLETLSTVEETCVREKAVDSLCRIGAQMRESDLVE 124

Query: 485 HFVPIIKRLGSGDWFTSRVSACGLF 559
           HF P+ KRL +G+WFT+RVSACG+F
Sbjct: 125 HFTPLAKRLSAGEWFTARVSACGIF 149

 Score = 40.4 bits (93), Expect = 0.016
 Identities = 38/145 (26%), Positives = 64/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 92  AVERCAGA---MAADDSLLPIAILIDELKSDEPLR-RLNSISRLGLIAQALGEERTRAEL 259
           AVE CA     +   D +  I  +I     D+  R R    ++L  + +A+G E TR +L
Sbjct: 222 AVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDL 281

Query: 260 IPFLSDNV-DDEDEVLLAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVE 436
           +P  +  + D+E EV +A A ++  F   +        +LP ++ LS+     VR     
Sbjct: 282 VPAYARLLCDNEAEVRIAAAGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALAS 341

Query: 437 SLSKVGSNMPDSHTCEHFVPIIKRL 511
            +  +   +    T EH +PI   L
Sbjct: 342 VIMGMAPVLGKDATIEHLLPIFLSL 366

 Score = 35.0 bits (79), Expect = 0.69
 Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
 Frame = +2

Query: 110 GAMAADDSLLPIAILIDELKSDEPLRRLNSISRLGLIAQALGEERTRAELIPFLSDNVDD 289
           G  A  + LLPI + +  LK + P  RLN IS+L  + Q +G +     L+P + +  +D
Sbjct: 351 GKDATIEHLLPIFLSL--LKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAED 408

Query: 290 ED-EVLLAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVESLSKVGSNMP 466
               V LA  E +      +G   +   L  L       +   +R+ A  +L ++     
Sbjct: 409 RHWRVRLAIIEYIPLLASQLGVGFFDEKLGALCMQWLQDKVHSIREAAANNLKRLAEEFG 468

Query: 467 DSHTCEHFVPIIKRLGSGDWFTSRVS 544
                +H VP +  + +   +  R++
Sbjct: 469 PEWAMQHIVPQVLEMINNPHYLYRMT 494

>ref|NP_189208.1| serine/threonine protein phosphatase 2A, 65 KDa regulatory subunit
           A [Arabidopsis thaliana] gi|7939566|dbj|BAA95767.1|
           protein phosphotase 2a 65kd regulatory subunit
           [Arabidopsis thaliana] gi|27311765|gb|AAO00848.1|
           protein phosphatase 2A 65 kDa regulatory subunit
           [Arabidopsis thaliana] gi|30725386|gb|AAP37715.1|
           At3g25800 [Arabidopsis thaliana]
          Length = 587

 Score =  200 bits (509), Expect = 1e-50
 Identities = 99/145 (68%), Positives = 122/145 (83%)
 Frame = +2

Query: 125 DDSLLPIAILIDELKSDEPLRRLNSISRLGLIAQALGEERTRAELIPFLSDNVDDEDEVL 304
           D+ L PIA+LIDELK+D+   RLNSI RL  IA+ALGEERTR ELIPFLS+N DD+DEVL
Sbjct: 5   DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVL 64

Query: 305 LAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVESLSKVGSNMPDSHTCE 484
           LA AE+LG F+PYVGG +YA++LLP LETLSTVEET VR+KAVESL +VGS M +S   +
Sbjct: 65  LAMAEELGVFIPYVGGVEYAHVLLPPLETLSTVEETCVREKAVESLCRVGSQMRESDLVD 124

Query: 485 HFVPIIKRLGSGDWFTSRVSACGLF 559
           HF+ ++KRL +G+WFT+RVSACG+F
Sbjct: 125 HFISLVKRLAAGEWFTARVSACGVF 149

 Score = 40.4 bits (93), Expect = 0.016
 Identities = 39/145 (26%), Positives = 64/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 92  AVERCAGA---MAADDSLLPIAILIDELKSDEPLR-RLNSISRLGLIAQALGEERTRAEL 259
           AVE CA     +   D +  I  +I     D+  R R    ++L  + +A+G E TR EL
Sbjct: 222 AVEGCAALGKLLEPQDCVQHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTEL 281

Query: 260 IP-FLSDNVDDEDEVLLAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVE 436
           +P ++    D+E EV +A A ++  F   +        +LP ++ LS+     VR     
Sbjct: 282 VPAYVRLLRDNEAEVRIAAAGKVTKFCRILNPEIAIQHILPCVKELSSDSSQHVRSALAS 341

Query: 437 SLSKVGSNMPDSHTCEHFVPIIKRL 511
            +  +   +    T EH +PI   L
Sbjct: 342 VIMGMAPVLGKDATIEHLLPIFLSL 366

 Score = 36.6 bits (83), Expect = 0.24
 Identities = 35/146 (23%), Positives = 62/146 (41%), Gaps = 1/146 (0%)
 Frame = +2

Query: 110 GAMAADDSLLPIAILIDELKSDEPLRRLNSISRLGLIAQALGEERTRAELIPFLSDNVDD 289
           G  A  + LLPI + +  LK + P  RLN IS+L  + Q +G +     L+P + +  +D
Sbjct: 351 GKDATIEHLLPIFLSL--LKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAED 408

Query: 290 ED-EVLLAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVESLSKVGSNMP 466
               V LA  E +      +G   +   L  L       +   +RD A  +L ++     
Sbjct: 409 RHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIRDAAANNLKRLAEEFG 468

Query: 467 DSHTCEHFVPIIKRLGSGDWFTSRVS 544
                +H VP +  + +   +  R++
Sbjct: 469 PEWAMQHIVPQVLEMVNNPHYLYRMT 494

 Score = 31.6 bits (70), Expect = 7.7
 Identities = 20/73 (27%), Positives = 32/73 (43%)
 Frame = +2

Query: 284 DDEDEVLLAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVESLSKVGSNM 463
           DD   V  A A  LG F   V        ++ + E L+  ++  VR  AVE  + +G  +
Sbjct: 174 DDMPMVRRAAATNLGKFAATVESAHLKTDVMSMFEDLTQDDQDSVRLLAVEGCAALGKLL 233

Query: 464 PDSHTCEHFVPII 502
                 +H +P+I
Sbjct: 234 EPQDCVQHILPVI 246

>pir||S51808 phosphoprotein phosphatase 2A 65K regulatory chain homolog pDF1 -
           Arabidopsis thaliana gi|683502|emb|CAA57528.1| protein
           phosphatase 2A 65 kDa regulatory subunit [Arabidopsis
           thaliana]
          Length = 587

 Score =  200 bits (509), Expect = 1e-50
 Identities = 99/145 (68%), Positives = 122/145 (83%)
 Frame = +2

Query: 125 DDSLLPIAILIDELKSDEPLRRLNSISRLGLIAQALGEERTRAELIPFLSDNVDDEDEVL 304
           D+ L PIA+LIDELK+D+   RLNSI RL  IA+ALGEERTR ELIPFLS+N DD+DEVL
Sbjct: 5   DEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVL 64

Query: 305 LAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVESLSKVGSNMPDSHTCE 484
           LA AE+LG F+PYVGG +YA++LLP LETLSTVEET VR+KAVESL +VGS M +S   +
Sbjct: 65  LAMAEELGVFIPYVGGVEYAHVLLPPLETLSTVEETCVREKAVESLCRVGSQMRESDLVD 124

Query: 485 HFVPIIKRLGSGDWFTSRVSACGLF 559
           HF+ ++KRL +G+WFT+RVSACG+F
Sbjct: 125 HFISLVKRLAAGEWFTARVSACGVF 149

 Score = 40.0 bits (92), Expect = 0.022
 Identities = 39/145 (26%), Positives = 64/145 (43%), Gaps = 5/145 (3%)
 Frame = +2

Query: 92  AVERCAGA---MAADDSLLPIAILIDELKSDEPLR-RLNSISRLGLIAQALGEERTRAEL 259
           AVE CA     +   D +  I  +I     D+  R R    ++L  + +A+G E TR EL
Sbjct: 222 AVEGCAALGKLLEPQDCVQHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTEL 281

Query: 260 IP-FLSDNVDDEDEVLLAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVE 436
           +P ++    D+E EV +A A ++  F   +        +LP ++ LS+     VR     
Sbjct: 282 VPAYVRLLRDNEAEVRIAAAGKVTKFCRILNPEIAIQDILPCVKELSSDSSQHVRSALAS 341

Query: 437 SLSKVGSNMPDSHTCEHFVPIIKRL 511
            +  +   +    T EH +PI   L
Sbjct: 342 VIMGMAPVLGKDATIEHLLPIFLSL 366

 Score = 36.6 bits (83), Expect = 0.24
 Identities = 35/146 (23%), Positives = 62/146 (41%), Gaps = 1/146 (0%)
 Frame = +2

Query: 110 GAMAADDSLLPIAILIDELKSDEPLRRLNSISRLGLIAQALGEERTRAELIPFLSDNVDD 289
           G  A  + LLPI + +  LK + P  RLN IS+L  + Q +G +     L+P + +  +D
Sbjct: 351 GKDATIEHLLPIFLSL--LKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAED 408

Query: 290 ED-EVLLAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVESLSKVGSNMP 466
               V LA  E +      +G   +   L  L       +   +RD A  +L ++     
Sbjct: 409 RHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIRDAAANNLKRLAEEFG 468

Query: 467 DSHTCEHFVPIIKRLGSGDWFTSRVS 544
                +H VP +  + +   +  R++
Sbjct: 469 PEWAMQHIVPQVLEMVNNPHYLYRMT 494

 Score = 31.6 bits (70), Expect = 7.7
 Identities = 20/73 (27%), Positives = 32/73 (43%)
 Frame = +2

Query: 284 DDEDEVLLAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVESLSKVGSNM 463
           DD   V  A A  LG F   V        ++ + E L+  ++  VR  AVE  + +G  +
Sbjct: 174 DDMPMVRRAAATNLGKFAATVESAHLKTDVMSMFEDLTQDDQDSVRLLAVEGCAALGKLL 233

Query: 464 PDSHTCEHFVPII 502
                 +H +P+I
Sbjct: 234 EPQDCVQHILPVI 246

>emb|CAB51803.1| phosphatase 2A regulatory A subunit [Oryza sativa]
           gi|5679686|emb|CAB51804.1| protein phosphatase 2A A
           subunit [Oryza sativa]
          Length = 587

 Score =  197 bits (500), Expect = 1e-49
 Identities = 98/145 (67%), Positives = 121/145 (82%)
 Frame = +2

Query: 125 DDSLLPIAILIDELKSDEPLRRLNSISRLGLIAQALGEERTRAELIPFLSDNVDDEDEVL 304
           D+ L PIAILIDELK+++   RLNSI RL  IA+ALGEERTR ELIPFLS+N DDEDEVL
Sbjct: 5   DEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDEDEVL 64

Query: 305 LAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETVVRDKAVESLSKVGSNMPDSHTCE 484
           LA AE+LG F+PYVGG ++A++LLP LETL TVEET VRDKAVESL ++G+ M +S   +
Sbjct: 65  LAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKESDIVD 124

Query: 485 HFVPIIKRLGSGDWFTSRVSACGLF 559
            FVP++KRL +G+WFT+RVS+CGLF
Sbjct: 125 WFVPVVKRLAAGEWFTARVSSCGLF 149

 Score = 36.6 bits (83), Expect = 0.24
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
 Frame = +2

Query: 110 GAMAADDSLLPIAILIDELKSDEPLRRLNSISRLGLIAQALGEERTRAELIPFLSDNVDD 289
           G  A  + LLPI + +  LK + P  RLN IS+L  + Q +G +     L+P + +  +D
Sbjct: 351 GKEATIEQLLPIFLSL--LKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAED 408

Query: 290 ED-EVLLAQAEQLGNFVPYVGGPQYAYLLLPLLETLSTVEETV--VRDKAVESLSKVGSN 460
               V LA  E +      +G   +   L  L   +  +E+ V  +RD A  +L ++   
Sbjct: 409 RHWRVRLAIIEYIPLLASQLGVGFFDDKLGAL--CMQWLEDKVFSIRDAAANNLKRLAEE 466

Query: 461 MPDSHTCEHFVP 496
                  +H +P
Sbjct: 467 FGPEWAMQHIIP 478

 Score = 36.2 bits (82), Expect = 0.31
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
 Frame = +2

Query: 56  VSIFHALSAD*D------AVERCAGA---MAADDSLLPIAILIDELKSDEPLR-RLNSIS 205
           +SIF  L+ D        AVE CA     +   D +  I  +I     D+  R R    +
Sbjct: 204 MSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVAN 263

Query: 206 RLGLIAQALGEERTRAELIP-FLSDNVDDEDEVLLAQAEQLGNFVPYVGGPQYAYLLLPL 382
           +L  + +A+G E +R +L+P ++    D+E EV +A A ++  F   +        +LP 
Sbjct: 264 QLYELCEAVGPEHSREQLVPAYVRLLRDNEAEVRIAAAGKVTKFCRILSPQLAIQHILPC 323

Query: 383 LETLSTVEETVVRDKAVESLSKVGSNMPDSHTCEHFVPIIKRL 511
           ++ LS+     VR      +  +   +    T E  +PI   L
Sbjct: 324 VKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSL 366



EST assemble image


clone accession position
1 MXL085d01_r BP098013 1 389
2 HCL067e07_r AV643320 12 471
3 CL42a05_r AV395458 15 560
4 LCL034b05_r AV627936 20 181
5 MXL094c10_r BP098501 42 393
6 CL32a11_r AV394879 68 557




Chlamydomonas reinhardtii
Kazusa DNA Research Institute