KCC000466A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000466A_C01 KCC000466A_c01
gtctgatgctattCATTAACAAGCTCTTGCACTGCTACTGCGGTGTGTGATTCCTCCAAG
TGGTCCCGAAATCATCGCTTTTCAACTACTTGGTTCTCGCGCCAAACTCTTTCCGGTTGC
CTGGATGACACGCAGCTCTGCACATCTGACACTTTCGCTATGGAAATCTACATTGCCGGG
CGTGAGTCAAGGAGCGCTCGAGGGCGCTCTGAGCGCGCTCAGCGCGCGGGCGGCATCTAG
CAACAGCAGCAGCGCCCAGCATGACAAAGCCGGGAGCCTCAGGCCTCTGGGCTGTAGCTT
CCGCCAGCCCCGCCCACTCACACCTGCTGGAACCTTTCGAGGCGCTGGCTTGGCGCTTGG
CGGCAACGGTGCCAGCACCACCGGCGGCGCTGGATCCAGCGCCGTACTTCACGGCAGCGA
AGGTGGCTGGCGGGCGTACGGCGCCGCCGCGGCCGCGTCGGCGCTGGCGCGCCGCGCACA
CCCTGACGATGACAGCACTGCGGCCGCCGATTCAGCTCCAGACATCGTGCTCGCGTTCTC
CCGCGCTGGGCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000466A_C01 KCC000466A_c01
         (552 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAG10393.1| heavy-chain fibroin [Galleria mellonella]               44  0.001
gb|AAC47008.1| fibroin-1 gi|1589021|prf||2209442A fibroin:ISOTYPE=1    43  0.002
emb|CAA16808.1| EG:171E4.3 [Drosophila melanogaster]                   43  0.003
ref|NP_569934.2| CG32809-PD [Drosophila melanogaster] gi|2283150...    43  0.003
gb|AAM52678.1| LD24507p [Drosophila melanogaster]                      43  0.003

>gb|AAG10393.1| heavy-chain fibroin [Galleria mellonella]
          Length = 1468

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 44/121 (36%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
 Frame = +2

Query: 197  LEGALSALSARAASSNSSSAQHDKAGSLRPLGCSFRQPRPLTPAGTFRGAGLA------- 355
            +E   SA SA AA S +S       G+L PLG     P   + AG   GAGL        
Sbjct: 691  IEDGSSAASAAAAGSGASGVGGLGLGALGPLGGI--GPIGASSAGA-SGAGLGGVGAAGT 747

Query: 356  -----LGGNGASTTG--GAGSSAVLHGSEGGWRAYGAAAAASALARRAHPDDDSTAAADS 514
                 +GG GAST G  GAG   +  G   G  A  AA+ AS        DD S+AA+ +
Sbjct: 748  SGLGGIGGVGASTAGSAGAGLGGIGAGGSSGSSAASAASGASGAGEVIVIDDRSSAASAA 807

Query: 515  A 517
            A
Sbjct: 808  A 808

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 43/121 (35%), Positives = 52/121 (42%), Gaps = 14/121 (11%)
 Frame = +2

Query: 197 LEGALSALSARAASSNSSSAQHDKAGSLRPLGCSFRQPRPLTPAGTFRGAGLA------- 355
           +E   SA SA AA S +S       G+L PLG   +       + T  GAGL        
Sbjct: 211 IEDGSSAASAAAAGSGASGVGGLGLGALGPLGGIGQSG---VSSATTSGAGLGGVGAVGA 267

Query: 356 -----LGGNGASTTG--GAGSSAVLHGSEGGWRAYGAAAAASALARRAHPDDDSTAAADS 514
                LGG GAS  G  GAG   V  G   G  A  AA+ AS        DD S+AA+ +
Sbjct: 268 SGLGGLGGAGASAAGSAGAGLGGVGVGGSSGSSAASAASGASGAGEVILIDDRSSAASRA 327

Query: 515 A 517
           A
Sbjct: 328 A 328

 Score = 39.7 bits (91), Expect = 0.027
 Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
 Frame = +2

Query: 212  SALSARAASSNSSSAQHDKAGSLRPLG--------CSFRQPRPLTPAGTFRGAGLA-LGG 364
            SA SA AA S +S       G L P G         +      L   GT   +GL  LGG
Sbjct: 908  SAASAAAAGSGASGLGGLGLGGLGPYGGIGLNGVSSASALGAGLGGVGTAGASGLGGLGG 967

Query: 365  NGASTTG--GAGSSAVLHGSEGGWRAYGAAAAASALARRAHPDDDSTAAADSA 517
             GAS  G  GAG   V  G   G  A  AA+ AS        DD S+AA+ +A
Sbjct: 968  TGASAAGSAGAGLGGVGAGGSFGSSAASAASGASGAGEVIVIDDRSSAASAAA 1020

 Score = 38.5 bits (88), Expect = 0.061
 Identities = 41/113 (36%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
 Frame = +2

Query: 212 SALSARAASSNSSSAQHDKAGSLRPLG--------CSFRQPRPLTPAGTFRGAGL-ALGG 364
           SA SA AASS +S       G L P G         +      L   GT   +GL  LGG
Sbjct: 428 SAASAAAASSGASGLGGLGLGGLGPYGGIGLNGVSSASALGAGLGGVGTAGASGLGGLGG 487

Query: 365 NGASTTG--GAGSSAVLHGSEGGWRAYGAAAAASALARRAHPDDDSTAAADSA 517
            G S  G  GAG   V  G   G  A  AA+A S  A     +D S+AA+ +A
Sbjct: 488 AGVSAVGPAGAGLGGVGAGGSSGSSAASAASARSGPAPVIVIEDGSSAASAAA 540

 Score = 35.8 bits (81), Expect = 0.40
 Identities = 38/106 (35%), Positives = 42/106 (38%), Gaps = 11/106 (10%)
 Frame = +2

Query: 212  SALSARAASSNSSSAQHDKAGSLRPLG--------CSFRQPRPLTPAGTFRGAGLA-LGG 364
            SA SA AA S +S       G L P G         +      L   GT   +GL  LGG
Sbjct: 1363 SAASAAAAGSGASGLGGLGLGGLGPYGGIGLNGVSSASALGAGLGGVGTAGASGLGGLGG 1422

Query: 365  NGASTTG--GAGSSAVLHGSEGGWRAYGAAAAASALARRAHPDDDS 496
             GAS  G  GAG   V  G   G  A  AA+ AS        DD S
Sbjct: 1423 TGASAAGSAGAGLGGVGAGGSSGSSAASAASGASGAGEVIVIDDRS 1468

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
 Frame = +2

Query: 197  LEGALSALSARAASSNSSSAQHDKAGSLRPLGCSFRQPRPLTPAGTFRGAGLALGGNGAS 376
            +E   SA SA AA S +S       G+  PLG                     +G NG S
Sbjct: 1171 IEDGSSAASAAAAGSGASGLGGLGLGAWGPLG--------------------GIGPNGVS 1210

Query: 377  TTGGAGSSAVLHGSEGGWRAYGAAAAASALARRAHP------DDDSTAAADSA 517
            +    GS+A   G+  G      ++AASA +  A P      +D S+AA+ +A
Sbjct: 1211 SASATGSAAGSTGAGLGGSGAAGSSAASAASGAAGPAPVIVIEDGSSAASAAA 1263

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
 Frame = +2

Query: 197  LEGALSALSARAASSNSSSAQHDKAGSLRPLGCSFRQPRPLTPAGTFRGAGLALGGNGAS 376
            +E   SA SA AA S +S       G+  PLG                     +G NG S
Sbjct: 1090 IEDGSSAASAAAAGSGASGLGGLGLGAWGPLG--------------------GIGPNGVS 1129

Query: 377  TTGGAGSSAVLHGSEGGWRAYGAAAAASALARRAHP------DDDSTAAADSA 517
            +    GS+A   G+  G      ++AASA +  A P      +D S+AA+ +A
Sbjct: 1130 SASATGSAAGSTGAGLGGSGAAGSSAASAASGAAGPAPVIVIEDGSSAASAAA 1182

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
 Frame = +2

Query: 197 LEGALSALSARAASSNSSSAQHDKAGSLRPLG-CSFRQPRPLTPAGTFRGA-GLALGGNG 370
           +E   SA SA AA S +S       G+  PLG     +    +  G+  G+ G  LGG+G
Sbjct: 529 IEDGSSAASAAAAGSGASGLGGLGLGAWGPLGGIGPNEVSSASATGSAAGSTGAGLGGSG 588

Query: 371 AS-------TTGGAGSSAVLHGSEGGWRAYGAAAAASA 463
           A+        +G AG + V+   +G   A  AAA + A
Sbjct: 589 AAGSSAASAASGAAGPAPVIVIEDGSSAASAAAAGSGA 626

 Score = 33.1 bits (74), Expect = 2.6
 Identities = 37/113 (32%), Positives = 47/113 (40%), Gaps = 11/113 (9%)
 Frame = +2

Query: 212  SALSARAASSNSSS------AQHDKAGSLRPLGCSFRQPRP--LTPAGTFRGAGLA-LGG 364
            SA SA AA S +S             G + P+G S        L   G    +GL  LGG
Sbjct: 802  SAASAAAAGSGASGPGGLGLGVWGPLGGIGPIGASSASASGAGLGGVGAAGTSGLGGLGG 861

Query: 365  NGASTTGGAGSSAVLHGSEG--GWRAYGAAAAASALARRAHPDDDSTAAADSA 517
             GAS  G AG+     G+ G  G     AA+  S        DD S+AA+ +A
Sbjct: 862  AGASAAGSAGAGLGGIGASGSSGSSVASAASGTSGAGEVIVIDDRSSAASAAA 914

 Score = 32.3 bits (72), Expect = 4.4
 Identities = 38/121 (31%), Positives = 50/121 (40%), Gaps = 14/121 (11%)
 Frame = +2

Query: 197  LEGALSALSARAASSNSSSAQHDKAGSLRPLGCSFRQPRPLTPAGTFRGAGLA------- 355
            +E   SA SA AA S +S        +L PLG     P  ++ A    GAGL        
Sbjct: 1252 IEDGSSAASAAAAGSGASGVGGLGLSALGPLGGI--GPHGVSSASAL-GAGLGGVGAPGA 1308

Query: 356  --LGGNGASTTGGAGSS-----AVLHGSEGGWRAYGAAAAASALARRAHPDDDSTAAADS 514
              LGG G +    AGS+      V  G   G     AA+ AS        +D S+AA+ +
Sbjct: 1309 SGLGGLGVAGASAAGSAGAGLGGVGAGGSSGLSTASAASGASGAGEVIVINDRSSAASAA 1368

Query: 515  A 517
            A
Sbjct: 1369 A 1369

 Score = 31.6 bits (70), Expect = 7.5
 Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
 Frame = +2

Query: 212 SALSARAASSNSSSAQHDKAGSLRPLGCSFRQPRPLTPAGTFRGAGLA---------LGG 364
           SA S  AA S +S         L P+G     P   T A T  GAGL          LGG
Sbjct: 322 SAASRAAAGSGASGVGGLGLSGLGPIGGI--GPIGATSAST-SGAGLGGVGAAGASGLGG 378

Query: 365 NGASTTGGAGSSAVLHGSEGGWRAYGAAAAASALARRAHPD----DDSTAAADSA 517
            G +    AGS+    G  G   + G++AA++A       +    DD ++AA +A
Sbjct: 379 LGGAGASAAGSAGAGLGGIGAGGSSGSSAASAASGASGAGEVIVIDDRSSAASAA 433

>gb|AAC47008.1| fibroin-1 gi|1589021|prf||2209442A fibroin:ISOTYPE=1
          Length = 360

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 35/102 (34%), Positives = 43/102 (41%), Gaps = 11/102 (10%)
 Frame = +2

Query: 191 GALEGALSALSARAASSNSSSAQHDKAGSLRPLGCSFRQPRPLTPAGTFRGAGLALG--- 361
           G L     A++   ASS +SSA      S+R  G          PA  F GAG   G   
Sbjct: 27  GRLLSNAGAITESTASSAASSASSTVTESIRTYG----------PAAIFSGAGAGAGVGV 76

Query: 362 --------GNGASTTGGAGSSAVLHGSEGGWRAYGAAAAASA 463
                   G GA    GAG+ A   G+ G  + YGA AAA+A
Sbjct: 77  GGAGGYGQGYGAGAGAGAGAGAGAGGAGGYGQGYGAGAAAAA 118

 Score = 32.0 bits (71), Expect = 5.7
 Identities = 35/101 (34%), Positives = 38/101 (36%), Gaps = 1/101 (0%)
 Frame = +2

Query: 179 GVSQGALEGALSALSARAASSNSSSAQHDKAGSLRPLGCSFRQPRPLTPAGTFRGAGLAL 358
           G   GA  G     S   A       Q   AGS    G +         AG + G     
Sbjct: 119 GAGAGAA-GGYGGGSGAGAGGAGGYGQGYGAGSGAGAGAAAAAGASAGAAGGYGGGAGVG 177

Query: 359 GGNGASTTGGAGSSAVLHGSEGGWRA-YGAAAAASALARRA 478
            G GA   GG G S   +GS  G  A  GAAAAA A AR A
Sbjct: 178 AGAGAGAAGGYGQS---YGSGAGAGAGAGAAAAAGAGARAA 215

 Score = 32.0 bits (71), Expect = 5.7
 Identities = 19/44 (43%), Positives = 22/44 (49%)
 Frame = +2

Query: 338 RGAGLALGGNGASTTGGAGSSAVLHGSEGGWRAYGAAAAASALA 469
           R AG   GG GA    GAG++A    S G    YG  A A A+A
Sbjct: 213 RAAGGYGGGYGAGAGAGAGAAASAGASGGYGGGYGGGAGAGAVA 256

 Score = 31.2 bits (69), Expect = 9.7
 Identities = 22/51 (43%), Positives = 25/51 (48%)
 Frame = +2

Query: 326 AGTFRGAGLALGGNGASTTGGAGSSAVLHGSEGGWRAYGAAAAASALARRA 478
           AG   GA    GG   +  GGAG     +G+  G  A GAAAAA A A  A
Sbjct: 118 AGAGAGAAGGYGGGSGAGAGGAGGYGQGYGAGSGAGA-GAAAAAGASAGAA 167

>emb|CAA16808.1| EG:171E4.3 [Drosophila melanogaster]
          Length = 449

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 35/101 (34%), Positives = 46/101 (44%), Gaps = 7/101 (6%)
 Frame = +2

Query: 221 SARAASSNSSSAQHDKAGS--LRPLGCSFRQPRPLTPAG-----TFRGAGLALGGNGAST 379
           S   ASS+SSSAQ   +GS  LR LG      + +         +   A  A     A+T
Sbjct: 323 SVDVASSSSSSAQDIASGSNTLRKLGSETNIQQKIAALSLACETSGAAAAAAAAAAAAAT 382

Query: 380 TGGAGSSAVLHGSEGGWRAYGAAAAASALARRAHPDDDSTA 502
            GG  +S    G+ GG    GAA AA A A  AH + +S +
Sbjct: 383 NGGVVASDATSGAIGGGGGAGAAGAAGASAAAAHSNSNSNS 423

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -3

Query: 499 SAVIVRVCAARQRRRGRGGAVRPPATFAAVKYGAGSSAAGGAGTVAAKRQASASKGSS 326
           S       AA       GG V   AT  A+  G G+ AAG AG  AA   ++++  S+
Sbjct: 367 SGAAAAAAAAAAAAATNGGVVASDATSGAIGGGGGAGAAGAAGASAAAAHSNSNSNSN 424

>ref|NP_569934.2| CG32809-PD [Drosophila melanogaster] gi|22831506|gb|AAF45655.2|
            CG32809-PD [Drosophila melanogaster]
          Length = 1234

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 35/101 (34%), Positives = 46/101 (44%), Gaps = 7/101 (6%)
 Frame = +2

Query: 221  SARAASSNSSSAQHDKAGS--LRPLGCSFRQPRPLTPAG-----TFRGAGLALGGNGAST 379
            S   ASS+SSSAQ   +GS  LR LG      + +         +   A  A     A+T
Sbjct: 1108 SVDVASSSSSSAQDIASGSNTLRKLGSETNIQQKIAALSLACETSGAAAAAAAAAAAAAT 1167

Query: 380  TGGAGSSAVLHGSEGGWRAYGAAAAASALARRAHPDDDSTA 502
             GG  +S    G+ GG    GAA AA A A  AH + +S +
Sbjct: 1168 NGGVVASDATSGAIGGGGGAGAAGAAGASAAAAHSNSNSNS 1208

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -3

Query: 499  SAVIVRVCAARQRRRGRGGAVRPPATFAAVKYGAGSSAAGGAGTVAAKRQASASKGSS 326
            S       AA       GG V   AT  A+  G G+ AAG AG  AA   ++++  S+
Sbjct: 1152 SGAAAAAAAAAAAAATNGGVVASDATSGAIGGGGGAGAAGAAGASAAAAHSNSNSNSN 1209

>gb|AAM52678.1| LD24507p [Drosophila melanogaster]
          Length = 653

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 35/101 (34%), Positives = 46/101 (44%), Gaps = 7/101 (6%)
 Frame = +2

Query: 221 SARAASSNSSSAQHDKAGS--LRPLGCSFRQPRPLTPAG-----TFRGAGLALGGNGAST 379
           S   ASS+SSSAQ   +GS  LR LG      + +         +   A  A     A+T
Sbjct: 527 SVDVASSSSSSAQDIASGSNTLRKLGSETNIQQKIAALSLACETSGAAAAAAAAAAAAAT 586

Query: 380 TGGAGSSAVLHGSEGGWRAYGAAAAASALARRAHPDDDSTA 502
            GG  +S    G+ GG    GAA AA A A  AH + +S +
Sbjct: 587 NGGVVASDATSGAIGGGGGAGAAGAAGASAAAAHSNSNSNS 627

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -3

Query: 499 SAVIVRVCAARQRRRGRGGAVRPPATFAAVKYGAGSSAAGGAGTVAAKRQASASKGSS 326
           S       AA       GG V   AT  A+  G G+ AAG AG  AA   ++++  S+
Sbjct: 571 SGAAAAAAAAAAAAATNGGVVASDATSGAIGGGGGAGAAGAAGASAAAAHSNSNSNSN 628



EST assemble image


clone accession position
1 HCL076e11_r AV643814 1 480
2 HCL058d09_r AV642807 14 277
3 MXL085h06_r BP098046 23 367
4 CL31h04_r AV395001 24 552
5 CL31g02_r AV395026 32 548
6 HCL022e06_r AV640792 45 408




Chlamydomonas reinhardtii
Kazusa DNA Research Institute