KCC000457A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000457A_C01 KCC000457A_c01
cttcggccgggaggcactgggcatgaccgacctgtgggtgaagcagTGCGGCAACAGCCA
CACGGGCTCTTTCAAGGACCTGGGCATGACCGTGCTGGTCTCTCAGGTGAACCGCATCCG
CAAGCTGAAGCCCGGCAGCATCACTGCCGTGGGCTGCGCCTCCACCGGCGACACCTCTGC
CGCCCTGTCCGCCTACTGCGCGGCCGCCGGCATCCCCTCCATCGTGTTCCTGCCCGCGGA
CAAGATTTCGCTGGCGCAGCTGGTGCAGCCCATCGCCAACGGTGCGCTGGTGCTGTCCAT
CGACACCGACTTCGACGGCTGCATGCGCCTAATCAAGCAGGTGACCGCCGAGACGCCCAT
CTACCTCGCCAACAGCATGAACTCGCTGCGCCTGAAGGGCCAGAAGACCGCCGCCATCGA
GATCCTGCAGCAGTTCGACTGGCAGGTGCCCGACTGGGTCATCATCCCCGGCGGCAACCT
GGGCAACATCTACGCCTTTTACAAGGGCTTCAAGATGTGCAAGGAGCTGGGCCTGGTGGA
CAAGATGCCGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000457A_C01 KCC000457A_c01
         (552 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_194713.1| threonine synthase, chloroplast [Arabidopsis th...   320  8e-87
gb|AAB04607.1| threonine synthase                                     320  8e-87
sp|Q9MT28|THRC_SOLTU Threonine synthase, chloroplast precursor (...   318  3e-86
ref|NP_565047.1| threonine synthase, putative [Arabidopsis thali...   313  1e-84
dbj|BAC10696.1| putative threonine synthase [Oryza sativa (japon...   308  2e-83

>ref|NP_194713.1| threonine synthase, chloroplast [Arabidopsis thaliana]
           gi|20140904|sp|Q9S7B5|THRC_ARATH Threonine synthase,
           chloroplast precursor (TS) gi|7488373|pir||T08545
           threonine synthase (EC 4.2.3.1) precursor - Arabidopsis
           thaliana gi|4850369|dbj|BAA77707.1| threonine synthase
           [Arabidopsis thaliana] gi|4914408|emb|CAB43659.1|
           threonine synthase [Arabidopsis thaliana]
           gi|7269883|emb|CAB79742.1| threonine synthase
           [Arabidopsis thaliana]
          Length = 526

 Score =  320 bits (820), Expect = 8e-87
 Identities = 154/183 (84%), Positives = 172/183 (93%)
 Frame = +2

Query: 2   FGREALGMTDLWVKQCGNSHTGSFKDLGMTVLVSQVNRIRKLKPGSITAVGCASTGDTSA 181
           FG++ LGM DLWVK CG SHTGSFKDLGMTVLVSQVNR+RK+K   +  VGCASTGDTSA
Sbjct: 179 FGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR-PVVGVGCASTGDTSA 237

Query: 182 ALSAYCAAAGIPSIVFLPADKISLAQLVQPIANGALVLSIDTDFDGCMRLIKQVTAETPI 361
           ALSAYCA+AGIPSIVFLPA+KIS+AQLVQPIANGA VLSIDTDFDGCM+LI+++TAE PI
Sbjct: 238 ALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREITAELPI 297

Query: 362 YLANSMNSLRLKGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFKMCKELGLVD 541
           YLANS+NSLRL+GQKTAAIEILQQFDWQVPDWVI+PGGNLGNIYAFYKGFKMC+ELGLVD
Sbjct: 298 YLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVD 357

Query: 542 KMP 550
           ++P
Sbjct: 358 RIP 360

>gb|AAB04607.1| threonine synthase
          Length = 525

 Score =  320 bits (820), Expect = 8e-87
 Identities = 154/183 (84%), Positives = 172/183 (93%)
 Frame = +2

Query: 2   FGREALGMTDLWVKQCGNSHTGSFKDLGMTVLVSQVNRIRKLKPGSITAVGCASTGDTSA 181
           FG++ LGM DLWVK CG SHTGSFKDLGMTVLVSQVNR+RK+K   +  VGCASTGDTSA
Sbjct: 178 FGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR-PVVGVGCASTGDTSA 236

Query: 182 ALSAYCAAAGIPSIVFLPADKISLAQLVQPIANGALVLSIDTDFDGCMRLIKQVTAETPI 361
           ALSAYCA+AGIPSIVFLPA+KIS+AQLVQPIANGA VLSIDTDFDGCM+LI+++TAE PI
Sbjct: 237 ALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREITAELPI 296

Query: 362 YLANSMNSLRLKGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFKMCKELGLVD 541
           YLANS+NSLRL+GQKTAAIEILQQFDWQVPDWVI+PGGNLGNIYAFYKGFKMC+ELGLVD
Sbjct: 297 YLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVD 356

Query: 542 KMP 550
           ++P
Sbjct: 357 RIP 359

>sp|Q9MT28|THRC_SOLTU Threonine synthase, chloroplast precursor (TS)
           gi|8439547|gb|AAF74984.1|AF082894_1 threonine synthase
           [Solanum tuberosum]
          Length = 519

 Score =  318 bits (815), Expect = 3e-86
 Identities = 155/184 (84%), Positives = 174/184 (94%), Gaps = 1/184 (0%)
 Frame = +2

Query: 2   FGREALGMTDLWVKQCGNSHTGSFKDLGMTVLVSQVNRIRKL-KPGSITAVGCASTGDTS 178
           FG++ LGMTDLWVK CG SHTGSFKDLGMTVLVSQVNR+RK+ KP  +  VGCASTGDTS
Sbjct: 172 FGKQFLGMTDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMHKP--VVGVGCASTGDTS 229

Query: 179 AALSAYCAAAGIPSIVFLPADKISLAQLVQPIANGALVLSIDTDFDGCMRLIKQVTAETP 358
           AALSAYCA+AGIPSIVFLPA+KIS+AQLVQPIANGA VLSIDTDFDGCM+LI++VTAE P
Sbjct: 230 AALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELP 289

Query: 359 IYLANSMNSLRLKGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFKMCKELGLV 538
           IYLANS+NSLRL+GQKTAAIEILQQFDW+VP+WVI+PGGNLGNIYAFYKGF+MCKELGLV
Sbjct: 290 IYLANSLNSLRLEGQKTAAIEILQQFDWEVPEWVIVPGGNLGNIYAFYKGFQMCKELGLV 349

Query: 539 DKMP 550
           D++P
Sbjct: 350 DRIP 353

>ref|NP_565047.1| threonine synthase, putative [Arabidopsis thaliana]
           gi|25406213|pir||A96753 probable threonine synthase
           [imported] - Arabidopsis thaliana
           gi|5903070|gb|AAD55628.1|AC008017_1 Putative threonine
           synthase [Arabidopsis thaliana]
           gi|20466326|gb|AAM20480.1| threonine synthase, putative
           [Arabidopsis thaliana] gi|25084052|gb|AAN72162.1|
           threonine synthase, putative [Arabidopsis thaliana]
          Length = 516

 Score =  313 bits (801), Expect = 1e-84
 Identities = 154/184 (83%), Positives = 170/184 (91%), Gaps = 1/184 (0%)
 Frame = +2

Query: 2   FGREALGMTDLWVKQCGNSHTGSFKDLGMTVLVSQVNRIRKL-KPGSITAVGCASTGDTS 178
           FG++ L M DLWVK CG SHTGSFKDLGM+VLVSQVNR+RK+ KP  +  VGCASTGDTS
Sbjct: 170 FGKQYLQMNDLWVKHCGISHTGSFKDLGMSVLVSQVNRLRKMNKP--VIGVGCASTGDTS 227

Query: 179 AALSAYCAAAGIPSIVFLPADKISLAQLVQPIANGALVLSIDTDFDGCMRLIKQVTAETP 358
           AALSAYCA+AGIPSIVFLPADKIS+AQLVQPIANGA VLSIDTDFDGCM LI++VTAE P
Sbjct: 228 AALSAYCASAGIPSIVFLPADKISMAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELP 287

Query: 359 IYLANSMNSLRLKGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFKMCKELGLV 538
           IYLANS+NSLRL+GQKTAAIEILQQF+WQVPDWVI+PGGNLGNIYAFYKGF MCKELGLV
Sbjct: 288 IYLANSLNSLRLEGQKTAAIEILQQFNWQVPDWVIVPGGNLGNIYAFYKGFHMCKELGLV 347

Query: 539 DKMP 550
           D++P
Sbjct: 348 DRIP 351

>dbj|BAC10696.1| putative threonine synthase [Oryza sativa (japonica
           cultivar-group)]
          Length = 525

 Score =  308 bits (790), Expect = 2e-83
 Identities = 153/184 (83%), Positives = 168/184 (91%), Gaps = 2/184 (1%)
 Frame = +2

Query: 5   GREALG-MTDLWVKQCGNSHTGSFKDLGMTVLVSQVNRIRKLKPGS-ITAVGCASTGDTS 178
           GRE LG MTDLWVK CG SHTGSFKDLGMTVLVSQVNR+R+      I  VGCASTGDTS
Sbjct: 179 GREHLGGMTDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRRAPLSRPINGVGCASTGDTS 238

Query: 179 AALSAYCAAAGIPSIVFLPADKISLAQLVQPIANGALVLSIDTDFDGCMRLIKQVTAETP 358
           AALSAYCAAAGIP+IVFLPAD+ISL QL+QPIANGA VLS+DTDFDGCMRLI++VTAE P
Sbjct: 239 AALSAYCAAAGIPAIVFLPADRISLQQLIQPIANGATVLSLDTDFDGCMRLIREVTAELP 298

Query: 359 IYLANSMNSLRLKGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFKMCKELGLV 538
           IYLANS+NSLRL+GQKTAAIEILQQFDWQVPDWVI+PGGNLGNIYAFYKGF+MC+ LGLV
Sbjct: 299 IYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFEMCRVLGLV 358

Query: 539 DKMP 550
           D++P
Sbjct: 359 DRVP 362



EST assemble image


clone accession position
1 CL31b09_r AV395047 1 470
2 LCL098f07_r AV631718 47 552




Chlamydomonas reinhardtii
Kazusa DNA Research Institute