Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000454A_C01 KCC000454A_c01
(1261 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_637143.1| conserved hypothetical protein [Xanthomonas cam... 101 3e-20
ref|ZP_00006352.1| COG2199: FOG: GGDEF domain [Rhodobacter sphae... 100 7e-20
ref|ZP_00084569.1| COG2199: FOG: GGDEF domain [Pseudomonas fluor... 97 6e-19
ref|NP_642122.1| conserved hypothetical protein [Xanthomonas axo... 97 8e-19
ref|ZP_00127534.1| COG2199: FOG: GGDEF domain [Pseudomonas syrin... 96 1e-18
>ref|NP_637143.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913] gi|21112872|gb|AAM41067.1|
conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 618
Score = 101 bits (251), Expect = 3e-20
Identities = 55/141 (39%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Frame = +1
Query: 22 IDAPPDPEIASILKLVQSIFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTM 201
+D+PPDP +I + + ALV+L D+ R + + G + + P + +FC +
Sbjct: 31 LDSPPDPVFDTIAAMAARMLGTEIALVSLVDEHRQWFKARVG-LEAPETPRKHAFCAHAL 89
Query: 202 ASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE- 378
R+D ++VIPDAL D RFCNN +V G P +RFY G PL +GH IGTLC PR
Sbjct: 90 --RSDDVLVIPDALLDPRFCNNPLVLGAPHIRFYAGAPLKLRDGHTIGTLCVIGTSPRAG 147
Query: 379 FDASRCVVLNNLAELVVRHLE 441
DA + + L L +L V +E
Sbjct: 148 LDAEQRIQLEGLRDLAVLRVE 168
>ref|ZP_00006352.1| COG2199: FOG: GGDEF domain [Rhodobacter sphaeroides]
Length = 336
Score = 100 bits (248), Expect = 7e-20
Identities = 58/160 (36%), Positives = 94/160 (58%)
Frame = +1
Query: 16 DAIDAPPDPEIASILKLVQSIFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGW 195
+ +D P+ E I L++SI+ P A+++L D R++++ +G +R + P +FC
Sbjct: 18 EILDTGPESEFDLITDLLRSIYAVPLAVMSLIDGDRLWVKSVQGGERR-EVPRCDTFCD- 75
Query: 196 TMASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR 375
+A R +++ I DA D R+ +N VRG PG+R Y G PL +G+ IGTLC D PR
Sbjct: 76 -VAIRGKKVLQIVDAQSDPRYRDNPYVRGEPGMRSYLGAPLTTPDGYNIGTLCVIDTIPR 134
Query: 376 EFDASRCVVLNNLAELVVRHLEKDIALQLRAHDNNSLAAA 495
++ + VL NLA+L V HLE L+L+A ++ +A+
Sbjct: 135 DYTSVDREVLANLAKLAVIHLE----LRLQATEDQQTSAS 170
>ref|ZP_00084569.1| COG2199: FOG: GGDEF domain [Pseudomonas fluorescens PfO-1]
Length = 322
Score = 97.1 bits (240), Expect = 6e-19
Identities = 53/159 (33%), Positives = 85/159 (53%)
Frame = +1
Query: 10 DADAIDAPPDPEIASILKLVQSIFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFC 189
D +D P+ + +L + +F P ALV L D R + + G + P SFC
Sbjct: 20 DLKLLDTAPEERFDRLTRLAKRLFNVPIALVTLVDKERQWFKSCVG-LDTTETPRSVSFC 78
Query: 190 GWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVK 369
+ D++M++PDA +D RF +N +V G P +RFY G PL +G+++GTLC D K
Sbjct: 79 AHAIL--RDELMLVPDAREDERFHDNPLVTGEPNIRFYAGYPLTVPSGNKMGTLCLIDTK 136
Query: 370 PREFDASRCVVLNNLAELVVRHLEKDIALQLRAHDNNSL 486
PR+ D +L +LA + + L +A+Q+ + D +L
Sbjct: 137 PRDLDEEERALLRDLAGMAEQEL---MAVQMASMDELTL 172
>ref|NP_642122.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306] gi|21107995|gb|AAM36658.1| conserved
hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 618
Score = 96.7 bits (239), Expect = 8e-19
Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Frame = +1
Query: 22 IDAPPDPEIASILKLVQSIFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTM 201
+D+PPDP ++ + +A A+V+L D+ R + + G R + P +FC
Sbjct: 31 LDSPPDPVFDTVAAMAARSLDAEIAVVSLVDEHRQWFKARIGLEAR-ETPRSQAFCAH-- 87
Query: 202 ASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE- 378
A R+D++MV+PDA D RFC+N +V G P +RFY G PL +GHRIGTLC PR
Sbjct: 88 AIRSDEVMVVPDAQLDPRFCDNPLVLGPPFIRFYAGAPLKLRDGHRIGTLCVIGTSPRPG 147
Query: 379 FDASRCVVLNNLAELVVRHLE 441
D + L L +L V +E
Sbjct: 148 LDQAAITQLEGLRDLAVLRVE 168
>ref|ZP_00127534.1| COG2199: FOG: GGDEF domain [Pseudomonas syringae pv. syringae
B728a]
Length = 732
Score = 95.9 bits (237), Expect = 1e-18
Identities = 52/141 (36%), Positives = 81/141 (56%), Gaps = 1/141 (0%)
Frame = +1
Query: 22 IDAPPDPEIASILKLVQSIFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTM 201
+D PP+ E I+++ IF+ P L++L R F + G + SFC + +
Sbjct: 23 MDTPPEHEYDQIVQMASRIFDLPIVLISLVHRDRQFFKARVG-LDVCETGRDVSFCNFAL 81
Query: 202 ASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE- 378
RN + ++PDAL+D RF +N +V G P +RFY G PLI ++GH +G+LC D KPRE
Sbjct: 82 MGRN--VFLVPDALQDERFSSNALVVGAPHIRFYAGAPLITASGHVLGSLCLIDNKPRET 139
Query: 379 FDASRCVVLNNLAELVVRHLE 441
F +VL +LA +++ +E
Sbjct: 140 FSERDQLVLQDLAVMIIERME 160
