Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000444A_C01 KCC000444A_c01
(583 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_286157.1| similar to ribosomal protein L7a, cytosolic [va... 35 0.58
ref|NP_044250.1| TrbL [Enterobacter aerogenes] gi|7465749|pir||T... 35 1.00
ref|NP_857987.1| putative DNA topoisomerase [Uncultured bacteriu... 35 1.00
gb|AAK38012.1| mating pair formation protein TrbL [Comamonas tes... 35 1.00
ref|XP_213271.2| similar to 3230401M21Rik protein [Rattus norveg... 33 2.2
>ref|XP_286157.1| similar to ribosomal protein L7a, cytosolic [validated] - rat [Mus
musculus]
Length = 260
Score = 35.4 bits (80), Expect = 0.58
Identities = 33/113 (29%), Positives = 43/113 (37%), Gaps = 1/113 (0%)
Frame = +1
Query: 130 QRCFRCHRHGERAWSAGADAPVEKPQCFCRG*ANYSCVQDTVCCIQIMAASIPLHLSAAK 309
Q RC R G R G + P + SC+Q T C IQ+ AS P A +
Sbjct: 21 QETSRCMRWGSR----GVEGP------------SGSCIQGTGCSIQVQPASAPGLRIATE 64
Query: 310 AMGWG-WP*HPV*GWCHGLVLTAQHQRRLVVPRSLDSRHMVTGVASWCLYGAL 465
G P H W L H+R+L +P+ + M G S G L
Sbjct: 65 LEGQSQCPPHSGASWASLLATAGCHRRKLRIPQFTEPLLMHLGTISSYYRGPL 117
>ref|NP_044250.1| TrbL [Enterobacter aerogenes] gi|7465749|pir||T08509 trbL protein -
Enterobacter aerogenes plasmid R751
gi|1572558|gb|AAC64453.1| TrbL [Enterobacter aerogenes]
Length = 572
Score = 34.7 bits (78), Expect = 1.00
Identities = 14/38 (36%), Positives = 20/38 (51%)
Frame = +2
Query: 338 QYRVGAMGWCSLLNTNAAWLCRAAWTAAIWSQVWRLGV 451
+Y+ A GW ++ T A WL WT + S VW G+
Sbjct: 41 RYQTAASGWAGVITTAATWL---FWTLVVISMVWTFGM 75
>ref|NP_857987.1| putative DNA topoisomerase [Uncultured bacterium]
gi|32455862|ref|NP_862515.1| TrbL protein [Pseudomonas
sp. ADP] gi|34500501|ref|NP_904272.1| TrbL [Delftia
acidovorans] gi|13937498|gb|AAK50309.1|U66917_78 TrbL
protein [Pseudomonas sp. ADP]
gi|31746373|emb|CAD97498.1| putative DNA topoisomerase
[uncultured bacterium] gi|34013322|dbj|BAC81995.1| TrbL
[Delftia acidovorans]
Length = 572
Score = 34.7 bits (78), Expect = 1.00
Identities = 14/38 (36%), Positives = 20/38 (51%)
Frame = +2
Query: 338 QYRVGAMGWCSLLNTNAAWLCRAAWTAAIWSQVWRLGV 451
+Y+ A GW ++ T A WL WT + S VW G+
Sbjct: 41 RYQAAASGWAGVITTAATWL---FWTLVVISMVWTFGM 75
>gb|AAK38012.1| mating pair formation protein TrbL [Comamonas testosteroni]
Length = 572
Score = 34.7 bits (78), Expect = 1.00
Identities = 14/38 (36%), Positives = 20/38 (51%)
Frame = +2
Query: 338 QYRVGAMGWCSLLNTNAAWLCRAAWTAAIWSQVWRLGV 451
+Y+ A GW ++ T A WL WT + S VW G+
Sbjct: 41 RYQAAASGWAGVITTAATWL---FWTLVVISMVWTFGM 75
>ref|XP_213271.2| similar to 3230401M21Rik protein [Rattus norvegicus]
Length = 1565
Score = 33.5 bits (75), Expect = 2.2
Identities = 32/104 (30%), Positives = 39/104 (36%), Gaps = 1/104 (0%)
Frame = -3
Query: 374 AVSTNPWHQPYTGCHGHP-HPIAFAADKCNGIDAAMI*MQHTVSCTHE*FAQPRQKHCGF 198
A +N P H P H +AF D+ I A V T E + H +
Sbjct: 821 AAGSNGLQLPVYIGHSEPVHAVAFTPDQLQLISAGDAIFLWDVQATPE---RQALMHDIW 877
Query: 197 STGASAPADHARSPCLWHLKHLCRVK*HCP*PSQPSTKHLHIVL 66
T P D S CL+HL+H HCP P T L VL
Sbjct: 878 RTWHPGPVDSLGSKCLYHLRH------HCP-HGVPMTDSLKAVL 914
