Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000434A_C01 KCC000434A_c01
(450 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_873230.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl... 37 0.047
ref|NP_794951.1| transcriptional regulator, AraC family [Pseudom... 36 0.10
gb|AAK54090.1|AF362371_1 histidine kinase DhkI [Dictyostelium di... 35 0.18
gb|AAO51038.1| similar to Dictyostelium discoideum (Slime mold).... 35 0.18
gb|AAF04257.1| subtilisin-like serine protease [Neospora caninum] 34 0.39
>ref|NP_873230.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-medo-
diaminopimelate ligase; murein peptide ligase
[Haemophilus ducreyi 35000HP] gi|33148098|gb|AAP95619.1|
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-medo-
diaminopimelate ligase; murein peptide ligase
[Haemophilus ducreyi 35000HP]
Length = 459
Score = 37.4 bits (85), Expect = 0.047
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Frame = +3
Query: 108 VQRGSINLLNSSGHSSIPLSS-----RQQVSDVVTYDRLFFRSPDEWLPSQQLAAACSAR 272
+QR NL+ + S LSS Q V + Y L F D+ +Q L A CSA
Sbjct: 203 IQRQFHNLVRTIPQSGCILSSITDQNTQAVLKMGNYSELQFSGQDQTWFAQPLVADCSA- 261
Query: 273 PFFFRRYSTTRRLQVQYNSIW*HKSNTAFSAIAA 374
F Y + QVQ+N I H + A AIAA
Sbjct: 262 --FEVHYQGNKAGQVQWNVIGAHNMHNALMAIAA 293
>ref|NP_794951.1| transcriptional regulator, AraC family [Pseudomonas syringae pv.
tomato str. DC3000] gi|28855587|gb|AAO58646.1|
transcriptional regulator, AraC family [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 330
Score = 36.2 bits (82), Expect = 0.10
Identities = 15/26 (57%), Positives = 18/26 (68%)
Frame = +2
Query: 362 CNSRLSSKHAPLSVHRTKKAPDSPHP 439
C SRL +APLSVH + APD+P P
Sbjct: 151 CRSRLGRGYAPLSVHLQRPAPDNPQP 176
>gb|AAK54090.1|AF362371_1 histidine kinase DhkI [Dictyostelium discoideum]
Length = 1736
Score = 35.4 bits (80), Expect = 0.18
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 9 CLHTLSVPRSVPPRPNSGPPRPAHTSTPTLSSPVQRGSINLLNSSGHSS--IPLSSRQQV 182
C T V + PP+P+S P S P LS G+INLL+S+G SS I +S Q +
Sbjct: 1491 CSLTTIVGVTTPPQPSSTITTPQFQSPPILSG--NSGNINLLSSNGTSSGGIEISGSQMI 1548
Query: 183 SDVV 194
V
Sbjct: 1549 PQKV 1552
>gb|AAO51038.1| similar to Dictyostelium discoideum (Slime mold). Histidine kinase
DhkI
Length = 1736
Score = 35.4 bits (80), Expect = 0.18
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 9 CLHTLSVPRSVPPRPNSGPPRPAHTSTPTLSSPVQRGSINLLNSSGHSS--IPLSSRQQV 182
C T V + PP+P+S P S P LS G+INLL+S+G SS I +S Q +
Sbjct: 1491 CSLTTIVGVTTPPQPSSTITTPQFQSPPILSG--NSGNINLLSSNGTSSGGIEISGSQMI 1548
Query: 183 SDVV 194
V
Sbjct: 1549 PQKV 1552
>gb|AAF04257.1| subtilisin-like serine protease [Neospora caninum]
Length = 865
Score = 34.3 bits (77), Expect = 0.39
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 24 SVPRSVPPRPNSGPPRPAHTSTPTLSSPVQRGSINLLNSSGHSSIPLSSRQ 176
S P+S PP P+ P P S+P + SP + S + L S+ S P +S Q
Sbjct: 739 SPPQSYPPEPSPSKPSPPEGSSPRVPSPHRHPSRSRLPSAVEPSPPPASPQ 789
