Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000400A_C01 KCC000400A_c01
(1073 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote... 68 3e-10
ref|NP_005830.1| Ser/Arg-related nuclear matrix protein (plenty ... 57 4e-07
gb|AAH36187.1| SRRM1 protein [Homo sapiens] 57 4e-07
ref|NP_862421.1| putative hydroxyproline-rich protein [Micrococc... 55 3e-06
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-... 55 3e-06
>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
plenty-of-prolines-101; serine/arginine repetitive matrix
protein 1 [Rattus norvegicus]
Length = 958
Score = 67.8 bits (164), Expect = 3e-10
Identities = 73/288 (25%), Positives = 112/288 (38%), Gaps = 15/288 (5%)
Frame = -2
Query: 874 LAAAPTHNEARQARGL---PTSPSNASTTHFLSSADDGWRQRRAMSWPEGP-----HLET 719
+AAA + + RQ R +S + + + G R+R + S P ET
Sbjct: 530 MAAADSVQQRRQYRRQNQQSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET 589
Query: 718 SVPRHHKRKPSQNLTKPPAHHNTSPRAHRPPPAPPAN*TDPPNRPRA-RPEANRRTSRPG 542
S PR +R PS PPA SP PPP PP PP R R+ P RRT P
Sbjct: 590 S-PRRRRRSPSP----PPARRRRSPSPAPPPPPPP-----PPRRRRSPTPPPRRRTPSPP 639
Query: 541 ARATAARALTSDTRDQRHLLPNGP*TAMLRTA---PAT*LSAEPARPPVETTAGQAARGE 371
R + QR P+ P RTA P A P+ PP + +
Sbjct: 640 PRRRSPSPRRYSPPIQRRYSPSPP--PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQ 697
Query: 370 APRSTTEHRSLRRATSDHQGHRNLHTLNQKATTEQNERGRPPRRGQPPQNAQ---CRKQG 200
T+ RS ++ +G + + + + N+R P R + PQ + R+
Sbjct: 698 RSPPVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGA 757
Query: 199 ATHPPKAEAIQTKSEPSRKASQSPQKATKS**RKPKPHTKMLCASSRA 56
+ P ++ + P R+ S++P+ P P + +SSR+
Sbjct: 758 SASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRS 805
Score = 44.7 bits (104), Expect = 0.003
Identities = 69/313 (22%), Positives = 118/313 (37%), Gaps = 8/313 (2%)
Frame = -2
Query: 1027 PRGAIFDPEKQHPPPGWLPTFIVLRT*VEAKPTKGHHSPTAT*HPSSRLGLLAAAPTHNE 848
P G + + + P P +P +K K P + SR + +P+H
Sbjct: 295 PMGCLVNDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTR 354
Query: 847 ARQ---ARGLPTSPSNASTTHFLSSADDGWRQRRAMSWPEGPHLETSVPRHHKRKPSQNL 677
R+ +R SP + S RR P H + P +R+ S +L
Sbjct: 355 PRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPR--HRRSRSPGRRRRRSSASL 412
Query: 676 TKPPAHHNTSPRAHRPPPAPPAN*TDPPNRP-RARPEAN--RRTSRPGARATAARALTSD 506
+ + ++S R+ PP PP + PP + R P A+ RR RP + AT
Sbjct: 413 SGSSSSSSSS-RSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATP----PPK 467
Query: 505 TRDQRHLLPNGP*TAMLRTAPAT*LSAEPARPPVETTAGQAA-RGEAPRSTTEHRSLRRA 329
TR + P A + +S P R + T + + E+P + R + +
Sbjct: 468 TR-------HSPTPQQSNRARKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELS 520
Query: 328 TSDHQGHRNLHTLNQKATTEQNERGRPPRRGQPPQNAQCRKQGATHPPKAE-AIQTKSEP 152
S+ ++ A + ++ R RR +++ + +H E + + P
Sbjct: 521 ESEEDKG------SKMAAADSVQQRRQYRRQNQQSSSEDERPKRSHVKNGEVGRRRRHSP 574
Query: 151 SRKASQSPQKATK 113
SR AS SP+K K
Sbjct: 575 SRSASPSPRKRQK 587
Score = 40.0 bits (92), Expect = 0.070
Identities = 57/255 (22%), Positives = 90/255 (34%), Gaps = 7/255 (2%)
Frame = -1
Query: 923 PP*PHRHVTPLISFRSFGGSTHAQRGATGQRSADIPIKRKHHSFSLVRRRWLASET---R 753
PP P R +P R S +R + R PI+R++ +RR + R
Sbjct: 618 PPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKR 677
Query: 752 NVLARRPTSGNVCAEAPQKETEPELDQTASTP*HLATGTPPSTRPTSELDRPTKQATRAP 573
P V P K+ P + + S R S R T++A R+P
Sbjct: 678 RASPSPPPKRRVSHSPPPKQRSPPVTKRRSP------SLSSKHRKGSSPGRSTREA-RSP 730
Query: 572 GGEQAHQPPGRPGNSRPGTHIRHP---GPASSAA*RSLNRHATNGTRNLTIC*A-SKAAG 405
+ H P RP P T P G ++S R +T R ++ K
Sbjct: 731 QPNKRHSPSPRP--RAPQTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKKIKK 788
Query: 404 GDDGGPGGTRRGAEEHHGTSKLAPGHERPPGPP*PAHTKPKSDHRAERARPATQTRPAAT 225
P RR + + P ++PP PP P ++ S + + PA + A +
Sbjct: 789 AASPSPQSVRRVSSSRSVSGSPEPTAKKPPAPPSPVQSQSPSTNWS----PAAPAKKAKS 844
Query: 224 ERAMPKTGRDAPTQG 180
P R++ +G
Sbjct: 845 PTPSPSPARNSDQEG 859
Score = 35.0 bits (79), Expect = 2.2
Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 15/168 (8%)
Frame = -2
Query: 496 QRHLLPNGP*TAMLRTAPAT*LSAEPARPPVETTAGQAARGEAPRSTTEHRSLRRATSDH 317
Q L+P G + AP EP P E + + PRS + +S R S
Sbjct: 290 QLDLVPMGCLVNDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRS 349
Query: 316 QGHRNLHTLNQKATTEQNERGRP-------------PRR-GQPPQNAQCRKQGATHPPKA 179
H ++ + + R RP PRR PP++ + R G +
Sbjct: 350 PSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSS 409
Query: 178 EAIQ-TKSEPSRKASQSPQKATKS**RKPKPHTKMLCASSRAEARKAR 38
++ + S S S+SP K P T+ L S+ R+ R
Sbjct: 410 ASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHR 457
>ref|NP_005830.1| Ser/Arg-related nuclear matrix protein (plenty of prolines 101-l;
Ser/Arg-related nuclear matrix protein (plenty of
prolines 101-like) [Homo sapiens]
gi|3005587|gb|AAC09321.1| Ser/Arg-related nuclear matrix
protein [Homo sapiens]
gi|33150824|gb|AAP97290.1|AF419855_1 Ser/Arg-related
nuclear matrix protein [Homo sapiens]
Length = 820
Score = 57.4 bits (137), Expect = 4e-07
Identities = 71/300 (23%), Positives = 113/300 (37%), Gaps = 25/300 (8%)
Frame = -2
Query: 880 GLLAAAPTHNEARQARGLPTSPSNASTTHFLSSADD-------------GWRQRRAMSWP 740
G +AAA + + RQ R S+ S + SS++D G R+R + S
Sbjct: 469 GKMAAADSVQQRRQYRRQNQQSSSDSGSS--SSSEDERPKRSHVKNGEVGRRRRHSPSRS 526
Query: 739 EGP-----HLETSVPRHHKRKPSQNLTKPPAHHNTSPRAHRPPPAPPAN*TDPPNRPRAR 575
P ETS +R PS PP SP + PPP T PP R
Sbjct: 527 ASPSPRKRQKETSPRGRRRRSPSP----PPTRRRRSP-SPAPPPRRRRTPTPPPRRRTPS 581
Query: 574 PEANRRTSRPGARATAARALTSDTRDQRHLLPNGP*TAMLRTA---PAT*LSAEPARPPV 404
P RR+ P + QR P+ P RTA P A P+ PP
Sbjct: 582 PPPRRRSPSPRRYSPPI---------QRRYSPSPP--PKRRTASPPPPPKRRASPSPPPK 630
Query: 403 ETTAGQAARGEAPRSTTEHRSLRRATSDHQGHRNLHTLNQKATTEQNERGRPPRRGQPPQ 224
+ + T+ RS ++ +G + + + + N+R P R + PQ
Sbjct: 631 RRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQ 690
Query: 223 NAQ----CRKQGATHPPKAEAIQTKSEPSRKASQSPQKATKS**RKPKPHTKMLCASSRA 56
+ R+ ++ P + ++ + P R+ S++P+ P P + +SSR+
Sbjct: 691 TSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRS 750
Score = 44.7 bits (104), Expect = 0.003
Identities = 66/283 (23%), Positives = 100/283 (35%), Gaps = 57/283 (20%)
Frame = -2
Query: 742 PEGPHLETSVPRHHKRKPSQNLTKPPAHHNTSPRAHRPPPAPPAN*TDPPNRP-RARPEA 566
P H + P +R+ S +L+ + ++S R+ PP PP + PP + R P A
Sbjct: 333 PPPRHRRSRSPVRRRRRSSASLSGSSSSSSSS-RSRSPPKKPPKRTSSPPRKTRRLSPSA 391
Query: 565 N--RRTSRPGARATAARALTSDTRDQRHLL-----------PNGP*TAMLRTAPAT*LSA 425
+ RR RP AT + S T Q + +G T T S
Sbjct: 392 SPPRRRHRPSPPATPPKTRDSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSP 451
Query: 424 EPARPPVETTAGQAARG---EAPRSTTEHRSLRR------------ATSDHQGHRNLHTL 290
P VE + + +G A S + R RR ++S+ + + H
Sbjct: 452 APKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVK 511
Query: 289 N-------------------QKATTEQNERGRPPRRGQPPQNAQCRKQGATHPPKAEAI- 170
N +K E + RGR R PP + R PP+
Sbjct: 512 NGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTP 571
Query: 169 ------QTKSEPSRKASQSPQKATKS**RK--PKPHTKMLCAS 65
+T S P R+ S SP++ + R+ P P K AS
Sbjct: 572 TPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTAS 614
Score = 38.5 bits (88), Expect = 0.20
Identities = 48/222 (21%), Positives = 79/222 (34%), Gaps = 26/222 (11%)
Frame = -3
Query: 669 RQHTITPRHGHTALHPPHQRTRPTHQTGHARARRRTGAPAARAPGQQP---PGHSHPTP- 502
R+ + +PR + P +R+ P + R R + +P R + P P TP
Sbjct: 166 RERSRSPRRRKSRSPSPRRRSSPVRRE---RKRSHSRSPRHRTKSRSPSPAPEKKEKTPE 222
Query: 501 -----------------GTSVICCLTVPEPPCYERHPQPNYLLSQQGRRWRRRRARRHEE 373
TS I + PEP + P P + +++ +E
Sbjct: 223 LPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPE------------KNSKKEQE 270
Query: 372 RRRGAPRNIEACAGPRATTRATVTCTH*TKKRPQSRTSAAGHPDAASRHRTRNAENRARR 193
+ + PR+ R+ +R+ + RP+ R + R R + RR
Sbjct: 271 KEKTRPRSRS-----RSKSRSRTRSRSPSHTRPRRRHRSDKMYSPRRRPSPRRRPSPRRR 325
Query: 192 THPRPKPSKPSRNQVVKPHRARKRLQ-----KVSNESQSRTR 82
T PR P P + P R R+R S+ S SR+R
Sbjct: 326 TPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSR 367
Score = 37.7 bits (86), Expect = 0.35
Identities = 65/297 (21%), Positives = 99/297 (32%), Gaps = 8/297 (2%)
Frame = -1
Query: 1064 GTARQPGARRTHAARGHLRPRETTPAPWLAADLHSVTHMSRSQANQRPP*PHRHVTPLIS 885
G R+ R+ + R +ET+P R + PP P R TP
Sbjct: 516 GRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPP-PRRRRTPTPP 574
Query: 884 FRSFGGSTHAQRGATGQRSADIPIKRKHHSFSLVRRRWLASET---RNVLARRPTSGNVC 714
R S +R + R PI+R++ +RR + R P V
Sbjct: 575 PRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVS 634
Query: 713 AEAPQKETEPELDQTASTP*HLATGTPPSTRPTSELDRPTKQATRAPGGEQAHQPPGRPG 534
P K+ + + S R S R T++A R+P + H P RP
Sbjct: 635 HSPPPKQRSSPVTKRRSP------SLSSKHRKGSSPSRSTREA-RSPQPNKRHSPSPRP- 686
Query: 533 NSRPGTHIRHP----GPASSAA*RSLNRHATNGTRNLTIC*A-SKAAGGDDGGPGGTRRG 369
P T P G +SS R +T R ++ K P RR
Sbjct: 687 -RAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRV 745
Query: 368 AEEHHGTSKLAPGHERPPGPP*PAHTKPKSDHRAERARPATQTRPAATERAMPKTGR 198
+ + P ++PP PP P ++ S + + PA + A P T +
Sbjct: 746 SSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWS----PAVPVKKAKKPNTEPITAK 798
Score = 36.6 bits (83), Expect = 0.77
Identities = 42/204 (20%), Positives = 73/204 (35%), Gaps = 4/204 (1%)
Frame = -2
Query: 709 RHHKRKPSQNLTKPPAHHNTSPRAHRPPPAPPAN*TDPPNRPRAR-PEANRRTSRPGARA 533
RH K +P SPR PP P PP R+R P RR S
Sbjct: 301 RHRSDKMYSPRRRPSPRRRPSPRRRTPPRRMP----PPPRHRRSRSPVRRRRRSSASLSG 356
Query: 532 TAARALTSDTRDQRHLLP---NGP*TAMLRTAPAT*LSAEPARPPVETTAGQAARGEAPR 362
+++ + +S +R P + P R +P+ RP T + P+
Sbjct: 357 SSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPKTRDSPTPQ 416
Query: 361 STTEHRSLRRATSDHQGHRNLHTLNQKATTEQNERGRPPRRGQPPQNAQCRKQGATHPPK 182
+ R R + S R + + TE+ E P + + + ++ +
Sbjct: 417 QSNRTRKSRVSVSP---GRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAA 473
Query: 181 AEAIQTKSEPSRKASQSPQKATKS 110
A+++Q + + R+ QS + S
Sbjct: 474 ADSVQQRRQYRRQNQQSSSDSGSS 497
>gb|AAH36187.1| SRRM1 protein [Homo sapiens]
Length = 904
Score = 57.4 bits (137), Expect = 4e-07
Identities = 71/300 (23%), Positives = 113/300 (37%), Gaps = 25/300 (8%)
Frame = -2
Query: 880 GLLAAAPTHNEARQARGLPTSPSNASTTHFLSSADD-------------GWRQRRAMSWP 740
G +AAA + + RQ R S+ S + SS++D G R+R + S
Sbjct: 471 GKMAAADSVQQRRQYRRQNQQSSSDSGSS--SSSEDERPKRSHVKNGEVGRRRRHSPSRS 528
Query: 739 EGP-----HLETSVPRHHKRKPSQNLTKPPAHHNTSPRAHRPPPAPPAN*TDPPNRPRAR 575
P ETS +R PS PP SP + PPP T PP R
Sbjct: 529 ASPSPRKRQKETSPRGRRRRSPSP----PPTRRRRSP-SPAPPPRRRRTPTPPPRRRTPS 583
Query: 574 PEANRRTSRPGARATAARALTSDTRDQRHLLPNGP*TAMLRTA---PAT*LSAEPARPPV 404
P RR+ P + QR P+ P RTA P A P+ PP
Sbjct: 584 PPPRRRSPSPRRYSPPI---------QRRYSPSPP--PKRRTASPPPPPKRRASPSPPPK 632
Query: 403 ETTAGQAARGEAPRSTTEHRSLRRATSDHQGHRNLHTLNQKATTEQNERGRPPRRGQPPQ 224
+ + T+ RS ++ +G + + + + N+R P R + PQ
Sbjct: 633 RRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQ 692
Query: 223 NAQ----CRKQGATHPPKAEAIQTKSEPSRKASQSPQKATKS**RKPKPHTKMLCASSRA 56
+ R+ ++ P + ++ + P R+ S++P+ P P + +SSR+
Sbjct: 693 TSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRS 752
Score = 42.7 bits (99), Expect = 0.011
Identities = 75/345 (21%), Positives = 112/345 (31%), Gaps = 83/345 (24%)
Frame = -2
Query: 850 EARQARGLPTSPSNASTTHFLSSADDGWRQRRAMSWPEGPHLETSV---PRHHKRKPSQN 680
E Q R S S + T S R+ R+ S P S P +R P +
Sbjct: 272 EKTQPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRR 331
Query: 679 LTKPPAHH----------------------NTSPRAHRPPPAPPAN*TDPPNR-----PR 581
+ PP H ++S R+ PP PP + PP + P
Sbjct: 332 MPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPS 391
Query: 580 ARPEANRR------TSRPGARATAARALTSDTRDQRHLLPNGP*TAMLRTAPAT*LSAEP 419
A P R T P R + ++ TR R + G + + T P
Sbjct: 392 ASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESP 451
Query: 418 ARPP----VETTAGQAARG---EAPRSTTEHRSLRR------------ATSDHQGHRNLH 296
+ P VE + + +G A S + R RR ++S+ + + H
Sbjct: 452 SPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSH 511
Query: 295 TLN-------------------QKATTEQNERGRPPRRGQPPQNAQCRKQGATHPPKAEA 173
N +K E + RGR R PP + R PP+
Sbjct: 512 VKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRR 571
Query: 172 I-------QTKSEPSRKASQSPQKATKS**RK--PKPHTKMLCAS 65
+T S P R+ S SP++ + R+ P P K AS
Sbjct: 572 TPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTAS 616
Score = 40.4 bits (93), Expect = 0.053
Identities = 66/303 (21%), Positives = 103/303 (33%), Gaps = 8/303 (2%)
Frame = -1
Query: 1064 GTARQPGARRTHAARGHLRPRETTPAPWLAADLHSVTHMSRSQANQRPP*PHRHVTPLIS 885
G R+ R+ + R +ET+P R + PP P R TP
Sbjct: 518 GRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPP-PRRRRTPTPP 576
Query: 884 FRSFGGSTHAQRGATGQRSADIPIKRKHHSFSLVRRRWLASET---RNVLARRPTSGNVC 714
R S +R + R PI+R++ +RR + R P V
Sbjct: 577 PRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVS 636
Query: 713 AEAPQKETEPELDQTASTP*HLATGTPPSTRPTSELDRPTKQATRAPGGEQAHQPPGRPG 534
P K+ + + S R S R T++A R+P + H P RP
Sbjct: 637 HSPPPKQRSSPVTKRRSP------SLSSKHRKGSSPSRSTREA-RSPQPNKRHSPSPRP- 688
Query: 533 NSRPGTHIRHP----GPASSAA*RSLNRHATNGTRNLTIC*A-SKAAGGDDGGPGGTRRG 369
P T P G +SS R +T R ++ K P RR
Sbjct: 689 -RAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRV 747
Query: 368 AEEHHGTSKLAPGHERPPGPP*PAHTKPKSDHRAERARPATQTRPAATERAMPKTGRDAP 189
+ + P ++PP PP P ++ S + + PA + A + P R++
Sbjct: 748 SSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWS----PAVPVKKAKSPTPSPSPPRNSD 803
Query: 188 TQG 180
+G
Sbjct: 804 QEG 806
Score = 33.1 bits (74), Expect = 8.5
Identities = 55/253 (21%), Positives = 84/253 (32%), Gaps = 28/253 (11%)
Frame = -2
Query: 712 PRHHK-RKPSQNLTKPPAH------HNTSPRAHRPPPAPPAN*TDPPNRPRARPEANRRT 554
PR K R PS P H+ SPR HR P+ + + PE + +
Sbjct: 172 PRRRKSRSPSPRRRSSPVRRERKRSHSRSPR-HRTKSRSPSPAPEKKEKTPELPEPSVKV 230
Query: 553 SRPGARATAARALTSDTRDQRHLLPNGP*TAMLRTAPAT*LSAEPARPPVETTAGQAARG 374
P + + TSD + P EP P E + +
Sbjct: 231 KEPSVQEATS---TSD----------------ILKVPKPEPIPEPKEPSPEKNSKKEKEK 271
Query: 373 EA--PRSTTEHRSLRRATSDHQGHRNLHTLNQKATTEQNERGRP-------------PRR 239
E PRS + +S R S H ++ + + R RP PRR
Sbjct: 272 EKTQPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRR 331
Query: 238 GQPP------QNAQCRKQGATHPPKAEAIQTKSEPSRKASQSPQKATKS**RKPKPHTKM 77
PP ++ R++ ++ + + S SR + P K T S P T+
Sbjct: 332 MPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSS----PPRKTRR 387
Query: 76 LCASSRAEARKAR 38
L S+ R+ R
Sbjct: 388 LSPSASPPRRRHR 400
>ref|NP_862421.1| putative hydroxyproline-rich protein [Micrococcus sp. 28]
gi|18025409|gb|AAK62517.1| putative hydroxyproline-rich
protein [Micrococcus sp. 28]
Length = 406
Score = 54.7 bits (130), Expect = 3e-06
Identities = 85/306 (27%), Positives = 106/306 (33%), Gaps = 7/306 (2%)
Frame = -3
Query: 1053 TTGGTPYPRREGPSSTQRNNTRPLVGCRPS*-CYAHESKPSQPKATIAPP-PRNTPHLV* 880
T P R GP CRPS + S P P A P P + P V
Sbjct: 68 TADPPPLSRSSGPDQ-----------CRPSSPAHQQRSGPHGPSARPWPARPDDAPCAVP 116
Query: 879 VFWRQHPRTTRRDRPEVCRHPHQTQAPLIFSRPQTMAGVRDAQCLGPKAHIWKRLCRGTT 700
+ +HP R RPE HP SR + R + P G T
Sbjct: 117 AWSSKHPWWRPRQRPE---HP--------CSRCGSARSARTSHATPPA---------GPT 156
Query: 699 KGNRART*PNRQHTITPRHGHTALHPPHQRTRPTHQTG---HARARRRTGAPAARAPGQQ 529
+G+ P +PR H P H+ RPT Q H RRR G+P R ++
Sbjct: 157 QGHV----PELALRPSPRDRH----PAHRNRRPTPQAEPAPHHSPRRRPGSPRKRR--ER 206
Query: 528 PPGHSHPTPGTSVICCLTVPEPPCYERHPQPNYLLSQQGRRWRRRRARRHEERRRGAPRN 349
P HP PG P P RH QP RRWR + R R R P +
Sbjct: 207 HPTARHPKPGRG-------PRRPQGTRH-QPEQRPRTPRRRWRPNQPARPASRPR--PPS 256
Query: 348 IEACAGPRATTRATV--TCTH*TKKRPQSRTSAAGHPDAASRHRTRNAENRARRTHPRPK 175
+ R T RA+ H + P R P RTR +R+ HP +
Sbjct: 257 RQRPGQLRRTARASRHRPMPHPPELLPCRRCRQLHRP------RTRRHRHRSPTHHPGLR 310
Query: 174 PSKPSR 157
P P R
Sbjct: 311 PHPPRR 316
>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
serine/arginine repetitive matrix protein 1 [Mus
musculus] gi|3153821|gb|AAC17422.1|
plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
musculus]
Length = 897
Score = 54.7 bits (130), Expect = 3e-06
Identities = 65/279 (23%), Positives = 104/279 (36%), Gaps = 6/279 (2%)
Frame = -2
Query: 874 LAAAPTHNEARQARGLPTSPSNASTTHFLSSADDGWRQRRAMSWPEGPHLETSVPRHHKR 695
L+ + + + + + R TSP + S R+RR+ S P P +R
Sbjct: 521 LSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSSRRRRSPSPP---------PARRRR 571
Query: 694 KPSQNLTKPPAHHNTSPRAHRPPPAPPAN*TDPPNRPRARPEANRRTSRPGARATAARAL 515
PS PP PR R P PP T P PR R + RR S P
Sbjct: 572 SPSP--APPPPPPPPPPRRRRSPTPPPRRRTPSP-PPRRRSPSPRRYSPP---------- 618
Query: 514 TSDTRDQRHLLPNGP*TAMLRTA---PAT*LSAEPARPPVETTAGQAARGEAPRSTTEHR 344
QR P+ P RTA P A P+ PP + + + T+ R
Sbjct: 619 -----IQRRYSPSPP--PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPTVTKRR 671
Query: 343 SLRRATSDHQGHRNLHTLNQKATTEQNERGRPPRRGQPPQNAQ---CRKQGATHPPKAEA 173
S ++ +G + + + + N+R P R + PQ + R+ + P ++
Sbjct: 672 SPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQS 731
Query: 172 IQTKSEPSRKASQSPQKATKS**RKPKPHTKMLCASSRA 56
+ P R+ S++P+ P P + +SSR+
Sbjct: 732 PSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRS 770
Score = 45.8 bits (107), Expect = 0.001
Identities = 82/373 (21%), Positives = 132/373 (34%), Gaps = 27/373 (7%)
Frame = -3
Query: 1065 RDSPTTGGTPYPR-REGPSSTQRNNTRPL-VGCRPS*CYAHESKPSQPKATIAPPPRNTP 892
R P++ TP P+ R P+ Q N TR V P +K + +P P P
Sbjct: 396 RHRPSSPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKP 455
Query: 891 HLV*VFWRQHPRTTRRDRPEVCRHPHQTQAPLIFSRPQTMAGVRDAQCLGPKAHIWKRLC 712
V + + + ++ + + Q + S + + ++H+
Sbjct: 456 RKVELSESEEDKGSKMAAADSVQQRRQYRRQNQQSSSDSGSSSTSEDERPKRSHV----- 510
Query: 711 RGTTKGNRART*PNRQHTITPRHGHTALHPPHQRTR--PTHQTGHARARRRTGAPAA--- 547
+ G R R P+R + +PR P Q + + T +R RR P A
Sbjct: 511 KNGEVGRRRRLSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSSRRRRSPSPPPARRR 570
Query: 546 RAPGQQPPGHSHPTPGTSVICCLTVPEPPCYERHPQ-PNYLLSQQGRRWRRRRARRH--- 379
R+P PP P P P PP R P P S RR+ RR+
Sbjct: 571 RSPSPAPPPPPPPPPPRR----RRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPS 626
Query: 378 ---EERRRGAPRNIEACAGPRATTRATVTCTH*TKKRPQSRTSAAGHPDAASRHRTRNAE 208
+ R P + A P + V+ + K+R + T P +S+HR ++
Sbjct: 627 PPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPTVTKRRS-PSLSSKHRKGSSP 685
Query: 207 NRARRTHPRPKPSK-------PSRNQVVKPHRARKRLQKVSNESQSRT------RKCCAL 67
R+ R P+P+K P Q P R+ QS + R+
Sbjct: 686 GRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRT 745
Query: 66 PHEPRLVRLGAEP 28
P EP+ ++ A P
Sbjct: 746 P-EPKKIKKAASP 757
Score = 39.7 bits (91), Expect = 0.091
Identities = 68/298 (22%), Positives = 109/298 (35%), Gaps = 22/298 (7%)
Frame = -2
Query: 940 AKPTKGHHSPTAT*HPSSRLGLLAAAPTHNEARQ---ARGLPTSPSNASTTHFLSSADDG 770
+K K P + SR + +P+H R+ +R SP + S
Sbjct: 265 SKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRR 324
Query: 769 WRQRRAMSWPEGPHLETSVPRHHKRKPSQNLTKPPAHHNTSPRAHRPPPAPPAN*TDPPN 590
RR P H + P +R+ S +L+ + ++S R+ PP PP + PP
Sbjct: 325 TPPRRMPPPPR--HRRSRSPGRRRRRSSASLSGSSSSSSSS-RSRSPPKKPPKRTSSPPR 381
Query: 589 RP-RARPEAN--RRTSRPGARAT--------AARALTSDTRDQRHLLPNGP*TAMLRTAP 443
+ R P A+ RR RP + AT ++ TR R + G + +
Sbjct: 382 KTRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHK 441
Query: 442 AT*LSAEPARPP----VETTAGQAARGE---APRSTTEHRSLRRATSDHQGHRNLHTLNQ 284
T P+ P VE + + +G A S + R RR +N + +
Sbjct: 442 GTEKRESPSPAPKPRKVELSESEEDKGSKMAAADSVQQRRQYRR--------QNQQSSSD 493
Query: 283 KATTEQNERGRPPRRGQPPQNAQCRKQGATHPPKAE-AIQTKSEPSRKASQSPQKATK 113
++ +E RP R +H E + + PSR AS SP+K K
Sbjct: 494 SGSSSTSEDERPKR---------------SHVKNGEVGRRRRLSPSRSASPSPRKRQK 536
Score = 38.1 bits (87), Expect = 0.26
Identities = 50/239 (20%), Positives = 81/239 (32%), Gaps = 15/239 (6%)
Frame = -2
Query: 709 RHHKRKPSQNLTKPPAHHNTSPRAHRPPPAPPAN*TDPPNRPRARPEANRRTSRPGARAT 530
R R P + ++ P SPR R P PR R ++ + P +
Sbjct: 166 RERSRSPRRRKSRSP-----SPR-RRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEK 219
Query: 529 AARALTSDTRDQRHLLPNGP*TAMLRTAPAT*LSAEPARPPVETTAGQAARGEAPRSTTE 350
+ R + + T+ + AP EP P E + + PRS +
Sbjct: 220 SPELPEPSVRMKDSSVQEATSTSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSR 279
Query: 349 HRSLRRATSDHQGHRNLHTLNQKATTEQNERGRP-------------PRR-GQPPQNAQC 212
+S R S H ++ + + R RP PRR PP++ +
Sbjct: 280 SKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRS 339
Query: 211 RKQGATHPPKAEAIQ-TKSEPSRKASQSPQKATKS**RKPKPHTKMLCASSRAEARKAR 38
R G + ++ + S S S+SP K P T+ L S+ R+ R
Sbjct: 340 RSPGRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHR 398
Score = 37.0 bits (84), Expect = 0.59
Identities = 56/255 (21%), Positives = 89/255 (33%), Gaps = 7/255 (2%)
Frame = -1
Query: 923 PP*PHRHVTPLISFRSFGGSTHAQRGATGQRSADIPIKRKHHSFSLVRRRWLASET---R 753
PP P R +P R S +R + R PI+R++ +RR + R
Sbjct: 583 PPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKR 642
Query: 752 NVLARRPTSGNVCAEAPQKETEPELDQTASTP*HLATGTPPSTRPTSELDRPTKQATRAP 573
P V P K+ P + + S R S R T++A R+P
Sbjct: 643 RASPSPPPKRRVSHSPPPKQRSPTVTKRRSP------SLSSKHRKGSSPGRSTREA-RSP 695
Query: 572 GGEQAHQPPGRPGNSRPGTHIRHP---GPASSAA*RSLNRHATNGTRNLTIC*A-SKAAG 405
+ H P RP P T P G ++S R +T R ++ K
Sbjct: 696 QPNKRHSPSPRP--RAPQTSSPPPVRRGASASPQGRQSPSPSTRPIRRVSRTPEPKKIKK 753
Query: 404 GDDGGPGGTRRGAEEHHGTSKLAPGHERPPGPP*PAHTKPKSDHRAERARPATQTRPAAT 225
P RR + + P ++PP PP P ++ S + + PA + A +
Sbjct: 754 AASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWS----PAVPAKKAKS 809
Query: 224 ERAMPKTGRDAPTQG 180
R++ +G
Sbjct: 810 PTPSLSPARNSDQEG 824
