KCC000392A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC000392A_C01 KCC000392A_c01
gCGATATCGCTGCTAAAACGTTGACACCCAGTGGTTGACGCCGCGGGCGAGACGAAATGC
GGCCGTCGATAGGAAGTTAGCGGAAACATGCAACGCATAAGGCTTGAAATTGCTGAGGAG
GTGCTGCCAGCCGGAGTCGCTAAGGAGGGAGTGCACCGGACCTGGTTTTGGCCCAGCCCG
GCTGCAACATGCGTGGCCGCCTTTGCGCAGGAGGTATTCACGCGCTTCCAGCTGCGCTGC
CCTGGTGGGGCAGCGGGCCTGCAGCTACTGCTGTCGGGTTTCGTGCTGCCACGGGACGCC
CCGATCGGGATCCTGCGTGATGGTGATCTGCTGGTGGTGCAGCGGTTGGCGGCAGGGGCG
GGCGCTCTGGCAAATGGCACGATAAAGGCGGCCAGGGCGGTGGTGCCACAACTCGCGCCT
GAGGCCGGCGTCCCTGGGCCGAGTGGCGGCGCTGCAGCAGGCGTGGGGCCCGGGGC
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000392A_C01 KCC000392A_c01
(476 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_331491.1| predicted protein [Neurospora crassa] gi|289267... 46 2e-04
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 45 6e-04
emb|CAD19511.1| UL36 protein [Pseudorabies virus] 44 0.001
pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [... 43 0.002
gb|AAP31500.1| gametogenetin protein 1a [Homo sapiens] 43 0.002
>ref|XP_331491.1| predicted protein [Neurospora crassa] gi|28926713|gb|EAA35680.1|
predicted protein [Neurospora crassa]
Length = 283
Score = 46.2 bits (108), Expect = 2e-04
Identities = 29/87 (33%), Positives = 40/87 (45%)
Frame = -2
Query: 403 PPPWPPLSCHLPERPPLPPTAAPPADHHHAGSRSGRPVAARNPTAVAAGPLPHQGSAAGS 224
PPP PP S P PP + APPA +G+ P ++ +P+ P PH ++ G+
Sbjct: 140 PPPSPPASSSAPSAPPAS-SGAPPAPPASSGAPPAPPASSGSPSPP---PPPHPPASTGA 195
Query: 223 A*IPPAQRRPRMLQPGWAKTRSGALPP 143
PPA +P P S A PP
Sbjct: 196 PSAPPASTQPSPSNPA-----SSAAPP 217
Score = 36.6 bits (83), Expect = 0.15
Identities = 29/94 (30%), Positives = 40/94 (41%)
Frame = -2
Query: 424 PQARVVAPPPWPPLSCHLPERPPLPPTAAPPADHHHAGSRSGRPVAARNPTAVAAGPLPH 245
P + PPP PP S P PP P ++ PPA +G S P +P A ++ P
Sbjct: 100 PVSSGTPPPPPPPASSGSP--PPPPQSSVPPAS---SGGPSAPPPPPPSPPASSSAPSAP 154
Query: 244 QGSAAGSA*IPPAQRRPRMLQPGWAKTRSGALPP 143
S +G+ PPA P + + S PP
Sbjct: 155 PAS-SGAPPAPPASSGAPPAPPASSGSPSPPPPP 187
Score = 32.7 bits (73), Expect = 2.2
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 9/132 (6%)
Frame = -1
Query: 461 PAAAPPLGPGTPASGASCGTTALAAFIVPFARA-----PAPAANRCTTSRSPSRRIPIGA 297
P+A PP P PAS ++ ++ P A PAP A+ + S P P
Sbjct: 134 PSAPPPPPPSPPASSSAPSAPPASSGAPPAPPASSGAPPAPPASSGSPSPPPPPHPPAST 193
Query: 296 SRGSTKPDSSSCRPAAPPGQRSWKRVNTSCAKA----ATHVAAGLGQNQVRCTPSLATPA 129
S P S+ P+ P + + S A A+ ++G G P+ T
Sbjct: 194 GAPSAPPASTQPSPSNPASSAAPPPPHNSGPSATEPSASGSSSGGGGGGGGAPPTATTSP 253
Query: 128 GSTSSAISSLMR 93
G +A +S+ R
Sbjct: 254 GPVVTAGASIER 265
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 44.7 bits (104), Expect = 6e-04
Identities = 42/124 (33%), Positives = 43/124 (33%), Gaps = 5/124 (4%)
Frame = -2
Query: 469 APRLLQRRHSAQGRRPQARVVAPPPW-----PPLSCHLPERPPLPPTAAPPADHHHAGSR 305
AP S G P R APPP PP + P P PA A
Sbjct: 233 APTATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATPP 292
Query: 304 SGRPVAARNPTAVAAGPLPHQGSAAGSA*IPPAQRRPRMLQPGWAKTRSGALPP*RLRLA 125
SGRP A P AA P P A G A PP R PG A P A
Sbjct: 293 SGRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTPGPQGGTPPAGAPAAGTPA 352
Query: 124 APPQ 113
APPQ
Sbjct: 353 APPQ 356
Score = 39.3 bits (90), Expect = 0.024
Identities = 33/104 (31%), Positives = 38/104 (35%), Gaps = 7/104 (6%)
Frame = -2
Query: 406 APPPWPPLSCHLPERPPLPPTAAPPADHHHAGSRSGRPVA--ARNPTAVAAGPLPHQGSA 233
APPP PP + PP PP A P A A + + PVA PTA P P A
Sbjct: 162 APPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPA 221
Query: 232 AGSA*IPPAQRRPRML-----QPGWAKTRSGALPP*RLRLAAPP 116
P A P PG PP +R +PP
Sbjct: 222 PTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRPGSPP 265
Score = 35.8 bits (81), Expect = 0.26
Identities = 38/118 (32%), Positives = 41/118 (34%), Gaps = 8/118 (6%)
Frame = -2
Query: 475 PRAPRLLQRRHSAQGRRPQARVVAPPPWPPLSCHLPERPPLPPTA-----APPADHHHAG 311
P P +H+ P A P P PP RP PTA APP A
Sbjct: 151 PAPPPAAAPQHAPPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTAR 210
Query: 310 SRSGRPVAARNPT---AVAAGPLPHQGSAAGSA*IPPAQRRPRMLQPGWAKTRSGALP 146
S P A PT A A P P A GS P RP PG R G+ P
Sbjct: 211 PGSPAPAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPG---VRPGSPP 265
Score = 35.4 bits (80), Expect = 0.34
Identities = 27/82 (32%), Positives = 29/82 (34%)
Frame = -2
Query: 424 PQARVVAPPPWPPLSCHLPERPPLPPTAAPPADHHHAGSRSGRPVAARNPTAVAAGPLPH 245
P AR PPP PP + + P PP AA P H P A PT A P P
Sbjct: 102 PAARPAPPPPPPPPAA---PKQPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPA--PPPA 156
Query: 244 QGSAAGSA*IPPAQRRPRMLQP 179
PP RP P
Sbjct: 157 AAPQHAPPPPPPPAARPTPTPP 178
Score = 35.4 bits (80), Expect = 0.34
Identities = 42/124 (33%), Positives = 46/124 (36%), Gaps = 27/124 (21%)
Frame = -2
Query: 409 VAPPPWPPLS-------CHLPERPPLP-PTA---------------APPADHHHA---GS 308
VAPPP P + P P P PTA APPA A G
Sbjct: 200 VAPPPAAPTARPGSPAPAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGV 259
Query: 307 RSGRPVAARNPTAVAAGPLPHQGSAAGSA*IPPAQRRPRMLQPGWAKTRS-GALPP*RLR 131
R G P AA +P A A P P A G PP+ R PG A T + GA P
Sbjct: 260 RPGSPPAAGSPPAPGATPAPTTTPAPGGTATPPSGR------PGPASTPAPGAATPAPTA 313
Query: 130 LAAP 119
AP
Sbjct: 314 TPAP 317
Score = 34.7 bits (78), Expect = 0.58
Identities = 33/122 (27%), Positives = 41/122 (33%)
Frame = -1
Query: 476 APGPTPAAAPPLGPGTPASGASCGTTALAAFIVPFARAPAPAANRCTTSRSPSRRIPIGA 297
APG TP A P PG P G G+ A PAP A T+ +P+
Sbjct: 239 APGSTPGAPPAGRPGAPPPGVRPGSPPAA------GSPPAPGATPAPTT-TPAPGGTATP 291
Query: 296 SRGSTKPDSSSCRPAAPPGQRSWKRVNTSCAKAATHVAAGLGQNQVRCTPSLATPAGSTS 117
G P S+ AA P + + AG TP PA T
Sbjct: 292 PSGRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTPGPQGGTPPAGAPAAGTP 351
Query: 116 SA 111
+A
Sbjct: 352 AA 353
Score = 33.1 bits (74), Expect = 1.7
Identities = 34/127 (26%), Positives = 43/127 (33%), Gaps = 6/127 (4%)
Frame = -1
Query: 473 PGPTPAAAP------PLGPGTPASGASCGTTALAAFIVPFARAPAPAANRCTTSRSPSRR 312
P P PAAAP P P PA+ + A P P P + +P
Sbjct: 121 PSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPP 180
Query: 311 IPIGASRGSTKPDSSSCRPAAPPGQRSWKRVNTSCAKAATHVAAGLGQNQVRCTPSLATP 132
P G + T +++ P APP R S A AAT P+
Sbjct: 181 PPAGPAARPTPAPTATPTPVAPPPAAPTARPG-SPAPAATPAPTPTPAPTATPAPTATPA 239
Query: 131 AGSTSSA 111
GST A
Sbjct: 240 PGSTPGA 246
Score = 32.3 bits (72), Expect = 2.9
Identities = 30/102 (29%), Positives = 31/102 (29%)
Frame = -2
Query: 424 PQARVVAPPPWPPLSCHLPERPPLPPTAAPPADHHHAGSRSGRPVAARNPTAVAAGPLPH 245
P A PP P P RP PP PP + RP P AA P
Sbjct: 71 PPAAAPPHPPAAPPPAAAPPRPAAPPPPPPPP--------AARPAPPPPPPPPAAPKQPS 122
Query: 244 QGSAAGSA*IPPAQRRPRMLQPGWAKTRSGALPP*RLRLAAP 119
AA P Q P P R PP AAP
Sbjct: 123 PPPAAA-----PQQHAPTPPPPAPPAARPAPTPPAPPPAAAP 159
Score = 30.8 bits (68), Expect = 8.4
Identities = 33/96 (34%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = -2
Query: 409 VAPPPWPPLSCHLP-ERPPLPPTAAP----PADHHHAGSRSGRPVAARNPTAVAAGPLPH 245
+ PPP P + P + PP AP PA AG RP A A AA P
Sbjct: 321 LTPPPGRPGAGPTPGPQGGTPPAGAPAAGTPAAPPQAGGLPARPAA----PAGAAAPSTV 376
Query: 244 QGSAAGSA*IPPAQRRPRMLQPGW--AKTRSGALPP 143
GSAA + AQ P + P + A T LPP
Sbjct: 377 PGSAAATPPPNRAQFAPPTVTPAFQAAPTVVAPLPP 412
>emb|CAD19511.1| UL36 protein [Pseudorabies virus]
Length = 3084
Score = 43.5 bits (101), Expect = 0.001
Identities = 45/154 (29%), Positives = 60/154 (38%), Gaps = 6/154 (3%)
Frame = -2
Query: 475 PRAPRLLQRRHSAQGR-RPQARVVAPPPWPPLSCHLPERPPLPPTAAPPADHHHAGSRSG 299
PR P + HS+ + +P + PP P ++ P P P TA P A
Sbjct: 2236 PREPA--PKPHSSPRKIQPSLKARIEPPPPVINPPYPATAPAPETAPPEAP-------QA 2286
Query: 298 RPVAARNPTAVAAGPLPHQGSAAGSA*IPPAQRRPRMLQPGWAKTRSGAL----PP*RLR 131
+P AA PT GP P + A PPAQ+ P A T A PP R +
Sbjct: 2287 QPPAAAKPTPQPQGPPPPPQPPSAQA--PPAQKPPAQPATAAATTAPKATPQTQPPTRAQ 2344
Query: 130 L-AAPPQQFQALCVACFR*LPIDGRISSRPRRQP 32
APP A A P + +++PR P
Sbjct: 2345 TQTAPPPPSAATAAAQVPPQPPSSQPAAKPRGAP 2378
Score = 41.2 bits (95), Expect = 0.006
Identities = 33/97 (34%), Positives = 37/97 (38%)
Frame = -2
Query: 406 APPPWPPLSCHLPERPPLPPTAAPPADHHHAGSRSGRPVAARNPTAVAAGPLPHQGSAAG 227
APPP PP P RP PP A PP+ R G P PLP Q
Sbjct: 2785 APPPAPP-----PSRPAAPPPAPPPSRPAPTPERHGEPPR----LMFTPPPLPPQ----- 2830
Query: 226 SA*IPPAQRRPRMLQPGWAKTRSGALPP*RLRLAAPP 116
P+Q+RP W + R A PP L PP
Sbjct: 2831 -----PSQQRPPEAPWTWPEPRDSAGPP---ALFTPP 2859
Score = 35.0 bits (79), Expect = 0.45
Identities = 30/113 (26%), Positives = 41/113 (35%), Gaps = 10/113 (8%)
Frame = -2
Query: 424 PQARVVAPPPWPPLSCHLPERPPLPPTAAP----------PADHHHAGSRSGRPVAARNP 275
P + V PP PPL+ P PP PP A P P A P+ P
Sbjct: 2153 PPSPPVDPPTLPPLA---PAAPPAPPPAKPAELTPAAKLAPPAPPPAKPVETTPLTKPQP 2209
Query: 274 TAVAAGPLPHQGSAAGSA*IPPAQRRPRMLQPGWAKTRSGALPP*RLRLAAPP 116
P H+ AAG+ +++PR P + P + R+ PP
Sbjct: 2210 QPQQGPPAAHKKPAAGTKAAAAPKQQPREPAPKPHSSPRKIQPSLKARIEPPP 2262
Score = 34.7 bits (78), Expect = 0.58
Identities = 25/86 (29%), Positives = 29/86 (33%), Gaps = 3/86 (3%)
Frame = -2
Query: 442 SAQGRRPQARVVAPPPWPPLSCHLPERPPLPPTAAPPADHHHAGSRSGRP---VAARNPT 272
S +P+ APP PP S P P A PP R P A PT
Sbjct: 2368 SQPAAKPRGAPPAPPAPPPPSAQTTLPRPAAPPAPPPPSAQTTLPRPAPPPPSAPAATPT 2427
Query: 271 AVAAGPLPHQGSAAGSA*IPPAQRRP 194
A GP P + G + P P
Sbjct: 2428 PPAPGPAPSAKKSDGDRIVEPKAGAP 2453
Score = 33.5 bits (75), Expect = 1.3
Identities = 35/131 (26%), Positives = 42/131 (31%), Gaps = 7/131 (5%)
Frame = -2
Query: 475 PRAPRLLQRRHSAQGRRPQARVVAPPPWPPLSCHLPERPPLPPTAAPPADHHHAGSRSGR 296
P AP + G P A PP PP+ E PPLPP P G
Sbjct: 2837 PEAPWTWPEPRDSAG--PPALFTPPPSDPPVQFPGREEPPLPPPPPPQPLWASEGEAETP 2894
Query: 295 PVAARNPTAVAAGPLPHQGSAA----GSA*IPPAQRRPRM---LQPGWAKTRSGALPP*R 137
R+P P P + PPA R P P W + +PP
Sbjct: 2895 ATPLRSPLERMPWPPPLEAPGTTPELPPEFAPPAPRSPLADPHQPPAWFDDLTALVPP-- 2952
Query: 136 LRLAAPPQQFQ 104
A PP + Q
Sbjct: 2953 ---AHPPPRRQ 2960
Score = 31.2 bits (69), Expect = 6.5
Identities = 35/129 (27%), Positives = 47/129 (36%), Gaps = 2/129 (1%)
Frame = -1
Query: 473 PGPTPAAAPPLGPGTPASGASCGTTALAAFIVPFARAPAPAANRCTTSRSPSRRIPIGAS 294
P PA PP T A +A AA P A PAP+A + R +
Sbjct: 2396 PAAPPAPPPPSAQTTLPRPAPPPPSAPAATPTPPAPGPAPSAKKSDGDRIVEPKAGAPPD 2455
Query: 293 RGSTKPDSSSCRPAAPPGQRSWKRVNTSCAKAATHVAAGLGQNQVRCTP--SLATPAGST 120
K A+P +R A H G Q++ R P S + PA ++
Sbjct: 2456 VRDAKFGGKVAGAASPGRPLDDERYKAGRADKCEH-TVGPDQHRTRSPPGTSDSEPASAS 2514
Query: 119 SSAISSLMR 93
SSA S+ R
Sbjct: 2515 SSAASTPSR 2523
>pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [imported] -
Boreogadus saida gi|2078483|gb|AAC60129.1| antifreeze
glycopeptide AFGP polyprotein precursor
Length = 507
Score = 43.1 bits (100), Expect = 0.002
Identities = 38/142 (26%), Positives = 55/142 (37%)
Frame = -1
Query: 455 AAPPLGPGTPASGASCGTTALAAFIVPFARAPAPAANRCTTSRSPSRRIPIGASRGSTKP 276
AA P TPA+ A+ TTA A A PA AA T + + + A+ +T
Sbjct: 64 AATPATAATPATAATAATTAATAATAATAATPARAARAATPATAATPATAATAATAATAA 123
Query: 275 DSSSCRPAAPPGQRSWKRVNTSCAKAATHVAAGLGQNQVRCTPSLATPAGSTSSAISSLM 96
+ + AA P + + A AAT A + ATPA + + A
Sbjct: 124 TAETPARAATPATAATPATAATPATAATAATAATSATAATAARA-ATPATAATPAT---- 178
Query: 95 RCMFPLTSYRRPHFVSPAASTT 30
P T+ R +PA + T
Sbjct: 179 ----PATAARAARAATPATAAT 196
Score = 42.4 bits (98), Expect = 0.003
Identities = 47/161 (29%), Positives = 66/161 (40%), Gaps = 12/161 (7%)
Frame = -1
Query: 476 APGPTPAAAP-PLGPGTPASGASCGTTALAAFIVPFARA--PAPAANRCTTSRSPSRRIP 306
A TPA AP P TPA+ A+ T AA ARA PA AA T + + P
Sbjct: 222 ARAATPATAPTPATAATPATAATAATAPTAATPARAARAATPATAATLATAATPATPATP 281
Query: 305 IGASRGSTKPDSSS-CRPAAP--PGQRSWKRVNTSCAKAATHVAAGLGQNQVR----CTP 147
A+ +T +++ R A P P + + A AAT A R TP
Sbjct: 282 ATAATDATAATAATPARAATPATPATAATPATPATAATAATAATAATAATPARAARAATP 341
Query: 146 -SLATPA-GSTSSAISSLMRCMFPLTSYRRPHFVSPAASTT 30
+ ATPA +T++ ++ T R +PA + T
Sbjct: 342 ATAATPATAATAATAATAATAATAATPARAARAATPATAAT 382
Score = 42.4 bits (98), Expect = 0.003
Identities = 39/155 (25%), Positives = 55/155 (35%), Gaps = 6/155 (3%)
Frame = -1
Query: 476 APGPTPAAAPPLG----PGTPASGASCGTTALAAFIVPFARAPAPA--ANRCTTSRSPSR 315
A TPA A L P TPA+ A+ T A AA ARA PA A T + +
Sbjct: 258 ARAATPATAATLATAATPATPATPATAATDATAATAATPARAATPATPATAATPATPATA 317
Query: 314 RIPIGASRGSTKPDSSSCRPAAPPGQRSWKRVNTSCAKAATHVAAGLGQNQVRCTPSLAT 135
A+ +T + AA P + + A AAT A R +
Sbjct: 318 ATAATAATAATAATPARAARAATPATAATPATAATAATAATAATAATAATPARAARAATP 377
Query: 134 PAGSTSSAISSLMRCMFPLTSYRRPHFVSPAASTT 30
+T++ ++ T R +PA T
Sbjct: 378 ATAATAATAATAATAATAATPARAARAATPATPAT 412
Score = 39.7 bits (91), Expect = 0.018
Identities = 33/123 (26%), Positives = 50/123 (39%), Gaps = 2/123 (1%)
Frame = -1
Query: 464 TPA-AAPPLGPGTPASGASCGTTALAAFIVPFARAPAPAANRCTTSRSPSRRIPIGASRG 288
TPA AA P P T A+ A+ T A AA ARA PA + + + A+
Sbjct: 304 TPATAATPATPATAATAATAATAATAATPARAARAATPATAATPATAATAATAATAATAA 363
Query: 287 STKPDSSSCRPAAPPGQRSWKRVNTSCAKAATHVAAGLGQNQVRCTPSL-ATPAGSTSSA 111
+ + + R A P + T+ A A + TP+ ATPA ++A
Sbjct: 364 TAATPARAARAATPATAATAATAATAATAATAATPARAARAATPATPATPATPATPATAA 423
Query: 110 ISS 102
++
Sbjct: 424 TAA 426
Score = 39.7 bits (91), Expect = 0.018
Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 2/150 (1%)
Frame = -1
Query: 473 PGPTPAAAPPLGPGTPASGASCGTTALAAFIVPFARA--PAPAANRCTTSRSPSRRIPIG 300
P AA P TPA+ A+ T A AA ARA PA AA T + +
Sbjct: 95 PARAARAATPATAATPATAATAATAATAATAETPARAATPATAATPATAATPATAATAAT 154
Query: 299 ASRGSTKPDSSSCRPAAPPGQRSWKRVNTSCAKAATHVAAGLGQNQVRCTPSLATPAGST 120
A+ +T ++ A + A+AAT A + +T
Sbjct: 155 AATSATAATAARAATPATAATPATPATAARAARAATPATAATAATAATAATAATAATAAT 214
Query: 119 SSAISSLMRCMFPLTSYRRPHFVSPAASTT 30
++ + R P T+ +PA + T
Sbjct: 215 AATPARAARAATPATAPTPATAATPATAAT 244
Score = 38.9 bits (89), Expect = 0.031
Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = -1
Query: 476 APGPTPAA-APPLGPGTPASGASCGTTALAAFIVPFARAPAPAANRCTTSRSPSRRIPIG 300
A TPA A P P TPA+ A+ T A AA A A A AA T +R+ P
Sbjct: 402 ARAATPATPATPATPATPATAATAATAATAATAATAATA-ATAATAPTPARAARAATPAT 460
Query: 299 ASRGSTKPDSSSCRPAAPPGQRSWKRVNTSCAKAATHVAA 180
+ +T P + + AA + ++ A AAT V A
Sbjct: 461 GATPATAPTAGTAATAATAATAATPARASTPATAATPVTA 500
Score = 35.0 bits (79), Expect = 0.45
Identities = 44/172 (25%), Positives = 63/172 (36%), Gaps = 26/172 (15%)
Frame = -1
Query: 476 APGPTPAAAPPLGPGTPASGASCGTTALAAFIVPFARA--------PAPAANRCTTSRSP 321
A TPA A P T A+ A+ T A AA ARA A AA T + +
Sbjct: 336 ARAATPATAAT--PATAATAATAATAATAATAATPARAARAATPATAATAATAATAATAA 393
Query: 320 SRRIPIGASRGSTKPDSSSCRPAAPPGQRSWKRVNTSCAKAATHV-------------AA 180
+ P A+R +T ++ A P + + A AAT AA
Sbjct: 394 TAATPARAARAATPATPATPATPATPATAATAATAATAATAATAATAATAATAPTPARAA 453
Query: 179 GLGQNQVRCTPSLATPAGSTSSAISSL-----MRCMFPLTSYRRPHFVSPAA 39
TP+ A AG+ ++A ++ R P T+ +PAA
Sbjct: 454 RAATPATGATPATAPTAGTAATAATAATAATPARASTPATAATPVTAATPAA 505
Score = 32.7 bits (73), Expect = 2.2
Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 15/144 (10%)
Frame = -1
Query: 458 AAAPPLGPGTPASGASCGTTALAAFIVPFARA-----------PAPAANRCTT----SRS 324
AAA P T A+ A+ T A AA A A PA AA TT + +
Sbjct: 30 AAARAATPATAATPATAATPATAATAATEATAATAATPATAATPATAATAATTAATAATA 89
Query: 323 PSRRIPIGASRGSTKPDSSSCRPAAPPGQRSWKRVNTSCAKAATHVAAGLGQNQVRCTPS 144
+ P A+R +T +++ AA + + A+AAT A +
Sbjct: 90 ATAATPARAARAATPATAATPATAATAATAATAATAETPARAATPATAATPATAATPATA 149
Query: 143 LATPAGSTSSAISSLMRCMFPLTS 72
+TS+ ++ R P T+
Sbjct: 150 ATAATAATSATAATAARAATPATA 173
>gb|AAP31500.1| gametogenetin protein 1a [Homo sapiens]
Length = 652
Score = 43.1 bits (100), Expect = 0.002
Identities = 41/123 (33%), Positives = 51/123 (41%), Gaps = 16/123 (13%)
Frame = -2
Query: 475 PRAPRLLQRRHSAQGRRPQARVVAPPPWPPLSCHLPERPPLPPTAAP------------P 332
PR RLL+ H QG P R + PPP PP + + P P+ P P
Sbjct: 120 PRIRRLLEASHRGQGDPPSLRPLKPPP-PPRQLSVKDTVPRAPSQFPAHLETWKPSRPLP 178
Query: 331 ADHHHAGSRSGRPVA--ARNPTAVAAGPLPHQGSAAGSA--*IPPAQRRPRMLQPGWAKT 164
++ A R +A A PT AGP +QG AG A PP M QP A +
Sbjct: 179 SERQPADRRITPALATTASTPTESQAGP-RNQGQKAGRARGRAPPHAGEGEMAQP--ADS 235
Query: 163 RSG 155
SG
Sbjct: 236 ESG 238
Score = 34.7 bits (78), Expect = 0.58
Identities = 34/110 (30%), Positives = 40/110 (35%), Gaps = 21/110 (19%)
Frame = -2
Query: 445 HSAQG-RRPQARVVAPP-----------PWPPLSCHLPERPPLPPTAAPPADHHHAGSRS 302
HSA G RRP ++APP P P L E PPLPP PP A +
Sbjct: 398 HSAPGPRRPAPALLAPPTFIFPAPTNGEPMRPGPPGLQELPPLPPPTPPPTLQPPALQPT 457
Query: 301 GRPVA---------ARNPTAVAAGPLPHQGSAAGSA*IPPAQRRPRMLQP 179
PVA + A A P AA A P P + +P
Sbjct: 458 PLPVAPPLTPGLGHKESALAPTAAPALPPALAADQAPAPSPAPAPTVAEP 507
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
HCL010b03_r |
AV640087 |
1 |
144 |
2 |
LCL035b05_r |
AV627999 |
2 |
340 |
3 |
LCL092a06_r |
AV631325 |
8 |
258 |
4 |
CL24g12_r |
AV394441 |
15 |
476 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute