Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000371A_C01 KCC000371A_c01
(645 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_293801.3| similar to RE32881p [Homo sapiens] 50 2e-05
gb|AAH44157.1| Similar to hepatoma-derived growth factor, relate... 47 2e-04
emb|CAA67261.1| collagen type I alpha 1 [Homo sapiens] 46 4e-04
gb|AAB94054.2| pro alpha 1(I) collagen [Homo sapiens] 46 4e-04
ref|NP_000079.1| alpha 1 type I collagen preproprotein; Collagen... 46 4e-04
>ref|XP_293801.3| similar to RE32881p [Homo sapiens]
Length = 439
Score = 50.4 bits (119), Expect = 2e-05
Identities = 40/116 (34%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +3
Query: 237 SPTDTMSGRGDRRDPQSGSRLASVRQQEEGSRPGAKGSAAASQRDSRGDTPDPGALASRK 416
S T + D R P GS+L S R GS+ ++ A +Q+DSR TP PG+ +
Sbjct: 40 SRTPAPGSQQDSRTPAPGSQLDS-RTPAPGSQQDSRTPAPGTQQDSR--TPAPGSQQDSR 96
Query: 417 REAGSVQQAAQQPSAKRTRVPDPPPHY-AGKPDELGRTC----DPSPKGQDKQAKP 569
A QQ +Q PDP P Y AG+PD R DP P+ Q P
Sbjct: 97 TPAPGTQQDSQTRPRLSAGQPDPCPRYSAGQPDPCPRLSAGQPDPCPRYSAGQPDP 152
>gb|AAH44157.1| Similar to hepatoma-derived growth factor, related protein 2 [Danio
rerio]
Length = 417
Score = 47.4 bits (111), Expect = 2e-04
Identities = 42/163 (25%), Positives = 62/163 (37%), Gaps = 18/163 (11%)
Frame = +3
Query: 135 GARDQSRPQLKQRPPAKWARPTKWARSCSN----AECVSPTDTMSGRGDRRDPQSGSRLA 302
G+ DQ +P +K++ PA P K AR+ S+ E SP++ D S
Sbjct: 136 GSEDQKKPAVKRKAPAPKRPPVKKARASSSDRDGEESGSPSEPEPSPSSDSDSGKNSDQD 195
Query: 303 SVRQQEEGSRPGAK--------------GSAAASQRDSRGDTPDPGALASRKREAGSVQQ 440
Q+E G R G K S + SQ D + D R +GS Q
Sbjct: 196 FTPQKESGGRGGKKPAGRGRRKKASSGSDSDSGSQSDQKAARSDSEDEKPRPAASGSESQ 255
Query: 441 AAQQPSAKRTRVPDPPPHYAGKPDELGRTCDPSPKGQDKQAKP 569
+ + + P PPP P + P PK + ++ KP
Sbjct: 256 SGSKSDSDSEPPPPPPPTRKA-PQGRKKAEKPPPKPRARKPKP 297
>emb|CAA67261.1| collagen type I alpha 1 [Homo sapiens]
Length = 1069
Score = 46.2 bits (108), Expect = 4e-04
Identities = 34/120 (28%), Positives = 41/120 (33%)
Frame = +3
Query: 240 PTDTMSGRGDRRDPQSGSRLASVRQQEEGSRPGAKGSAAASQRDSRGDTPDPGALASRKR 419
PT GDR +P +PGAKG + P P A
Sbjct: 792 PTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPG 851
Query: 420 EAGSVQQAAQQPSAKRTRVPDPPPHYAGKPDELGRTCDPSPKGQDKQAKPPG*AREDSGQ 599
G+V P AK R PP G P GR P P G PPG A ++ G+
Sbjct: 852 PIGNVGA----PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGK 907
Score = 35.8 bits (81), Expect = 0.55
Identities = 28/86 (32%), Positives = 33/86 (37%), Gaps = 2/86 (2%)
Frame = +3
Query: 324 GSR--PGAKGSAAASQRDSRGDTPDPGALASRKREAGSVQQAAQQPSAKRTRVPDPPPHY 497
GSR PGA G A +P P EAG +A + T P
Sbjct: 491 GSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP------ 544
Query: 498 AGKPDELGRTCDPSPKGQDKQAKPPG 575
G P G+T P P GQD + PPG
Sbjct: 545 -GSPGPDGKTGPPGPAGQDGRPGPPG 569
Score = 35.0 bits (79), Expect = 0.94
Identities = 36/140 (25%), Positives = 46/140 (32%), Gaps = 20/140 (14%)
Frame = +3
Query: 240 PTDTMSGRGDRRDPQSGSRLASVRQQEEGSRPGAKGSAAASQRDSRGDTPDPGALASRKR 419
P G+G R + R V G KGS A TP P +A ++
Sbjct: 900 PAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRG 959
Query: 420 EAG----------------SVQQAAQQPSAKRTRVPDP----PPHYAGKPDELGRTCDPS 539
G S + Q PS P PP AG P E GR P
Sbjct: 960 VVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPG 1019
Query: 540 PKGQDKQAKPPG*AREDSGQ 599
+G + PG A+ D G+
Sbjct: 1020 AEGSPGRDGSPG-AKGDRGE 1038
Score = 32.7 bits (73), Expect = 4.7
Identities = 27/84 (32%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Frame = +3
Query: 333 PGAKGSAAASQRDSRGDTPDPGALASRKREAGSVQQAAQQPSAKRTRVPDPPPHYAGKPD 512
PGA G A P P A + E G A P + P PP AGKP
Sbjct: 604 PGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGP----AGSPGFQGLPGPAGPPGEAGKPG 659
Query: 513 ELGRTCD---PSPKGQDKQAKPPG 575
E G D P P G + PG
Sbjct: 660 EQGVPGDLGAPGPSGARGERGFPG 683
>gb|AAB94054.2| pro alpha 1(I) collagen [Homo sapiens]
Length = 1461
Score = 46.2 bits (108), Expect = 4e-04
Identities = 34/120 (28%), Positives = 41/120 (33%)
Frame = +3
Query: 240 PTDTMSGRGDRRDPQSGSRLASVRQQEEGSRPGAKGSAAASQRDSRGDTPDPGALASRKR 419
PT GDR +P +PGAKG + P P A
Sbjct: 789 PTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPG 848
Query: 420 EAGSVQQAAQQPSAKRTRVPDPPPHYAGKPDELGRTCDPSPKGQDKQAKPPG*AREDSGQ 599
G+V P AK R PP G P GR P P G PPG A ++ G+
Sbjct: 849 PIGNVGA----PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGK 904
Score = 35.8 bits (81), Expect = 0.55
Identities = 28/86 (32%), Positives = 33/86 (37%), Gaps = 2/86 (2%)
Frame = +3
Query: 324 GSR--PGAKGSAAASQRDSRGDTPDPGALASRKREAGSVQQAAQQPSAKRTRVPDPPPHY 497
GSR PGA G A +P P EAG +A + T P
Sbjct: 488 GSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP------ 541
Query: 498 AGKPDELGRTCDPSPKGQDKQAKPPG 575
G P G+T P P GQD + PPG
Sbjct: 542 -GSPGPDGKTGPPGPAGQDGRPGPPG 566
Score = 35.0 bits (79), Expect = 0.94
Identities = 36/140 (25%), Positives = 46/140 (32%), Gaps = 20/140 (14%)
Frame = +3
Query: 240 PTDTMSGRGDRRDPQSGSRLASVRQQEEGSRPGAKGSAAASQRDSRGDTPDPGALASRKR 419
P G+G R + R V G KGS A TP P +A ++
Sbjct: 897 PAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRG 956
Query: 420 EAG----------------SVQQAAQQPSAKRTRVPDP----PPHYAGKPDELGRTCDPS 539
G S + Q PS P PP AG P E GR P
Sbjct: 957 VVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPG 1016
Query: 540 PKGQDKQAKPPG*AREDSGQ 599
+G + PG A+ D G+
Sbjct: 1017 AEGSPGRDGSPG-AKGDRGE 1035
Score = 32.7 bits (73), Expect = 4.7
Identities = 27/84 (32%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Frame = +3
Query: 333 PGAKGSAAASQRDSRGDTPDPGALASRKREAGSVQQAAQQPSAKRTRVPDPPPHYAGKPD 512
PGA G A P P A + E G A P + P PP AGKP
Sbjct: 601 PGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGP----AGSPGFQGLPGPAGPPGEAGKPG 656
Query: 513 ELGRTCD---PSPKGQDKQAKPPG 575
E G D P P G + PG
Sbjct: 657 EQGVPGDLGAPGPSGARGERGFPG 680
>ref|NP_000079.1| alpha 1 type I collagen preproprotein; Collagen I, alpha-1
polypeptide; osteogenesis imperfecta type IV; collagen of
skin, tendon and bone, alpha-1 chain [Homo sapiens]
gi|1418928|emb|CAA98968.1| prepro-alpha1(I) collagen
[Homo sapiens]
Length = 1464
Score = 46.2 bits (108), Expect = 4e-04
Identities = 34/120 (28%), Positives = 41/120 (33%)
Frame = +3
Query: 240 PTDTMSGRGDRRDPQSGSRLASVRQQEEGSRPGAKGSAAASQRDSRGDTPDPGALASRKR 419
PT GDR +P +PGAKG + P P A
Sbjct: 792 PTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPG 851
Query: 420 EAGSVQQAAQQPSAKRTRVPDPPPHYAGKPDELGRTCDPSPKGQDKQAKPPG*AREDSGQ 599
G+V P AK R PP G P GR P P G PPG A ++ G+
Sbjct: 852 PIGNVGA----PGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGK 907
Score = 35.8 bits (81), Expect = 0.55
Identities = 28/86 (32%), Positives = 33/86 (37%), Gaps = 2/86 (2%)
Frame = +3
Query: 324 GSR--PGAKGSAAASQRDSRGDTPDPGALASRKREAGSVQQAAQQPSAKRTRVPDPPPHY 497
GSR PGA G A +P P EAG +A + T P
Sbjct: 491 GSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP------ 544
Query: 498 AGKPDELGRTCDPSPKGQDKQAKPPG 575
G P G+T P P GQD + PPG
Sbjct: 545 -GSPGPDGKTGPPGPAGQDGRPGPPG 569
Score = 35.4 bits (80), Expect = 0.72
Identities = 36/140 (25%), Positives = 47/140 (32%), Gaps = 20/140 (14%)
Frame = +3
Query: 240 PTDTMSGRGDRRDPQSGSRLASVRQQEEGSRPGAKGSAAASQRDSRGDTPDPGALASRKR 419
P G+G R + R V G KGS A TP P +A ++
Sbjct: 900 PAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRG 959
Query: 420 EAG----------------SVQQAAQQPSAKRTRVPDP----PPHYAGKPDELGRTCDPS 539
G S + Q PS P PP AG P E GR P+
Sbjct: 960 VVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPA 1019
Query: 540 PKGQDKQAKPPG*AREDSGQ 599
+G + PG A+ D G+
Sbjct: 1020 AEGSPGRDGSPG-AKGDRGE 1038
Score = 32.7 bits (73), Expect = 4.7
Identities = 27/84 (32%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Frame = +3
Query: 333 PGAKGSAAASQRDSRGDTPDPGALASRKREAGSVQQAAQQPSAKRTRVPDPPPHYAGKPD 512
PGA G A P P A + E G A P + P PP AGKP
Sbjct: 604 PGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGP----AGSPGFQGLPGPAGPPGEAGKPG 659
Query: 513 ELGRTCD---PSPKGQDKQAKPPG 575
E G D P P G + PG
Sbjct: 660 EQGVPGDLGAPGPSGARGERGFPG 683
