Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000369A_C01 KCC000369A_c01
(471 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_888321.1| putative cytochrome [Bordetella bronchiseptica]... 33 1.7
ref|NP_477557.1| wsv035 [shrimp white spot syndrome virus] gi|15... 33 2.2
emb|CAB92389.1| hypothetical protein L4325.02 [Leishmania major]... 32 3.7
ref|NP_811871.1| conserved hypothetical protein [Bacteroides the... 32 3.7
ref|NP_625799.1| crossover junction endodeoxyribonuclease [Strep... 32 4.9
>ref|NP_888321.1| putative cytochrome [Bordetella bronchiseptica]
gi|33568361|emb|CAE32273.1| putative cytochrome
[Bordetella bronchiseptica]
Length = 946
Score = 33.1 bits (74), Expect = 1.7
Identities = 34/95 (35%), Positives = 38/95 (39%), Gaps = 3/95 (3%)
Frame = +2
Query: 194 ATYISDGSGVALTWPLDNLLTARR-LDGLAPENE-LAGGLRWLGAQLYCRICALGGLRAP 367
A I D +G+ L P N ARR L AP G WLG G+ A
Sbjct: 481 ANAIFDATGIRLREPPFNGAQARRALSAAAPARRGNRGAYAWLG-----------GIAAA 529
Query: 368 NMGHSAAAWVESPGRAHICG-TP*ISGAAAAGRGR 469
G AAW P A I G P + AAA RGR
Sbjct: 530 AAGLVVAAWPWRPAIAPIAGPEPGLYSAAAIERGR 564
>ref|NP_477557.1| wsv035 [shrimp white spot syndrome virus]
gi|15021433|gb|AAK77710.1|AF369029_41 ORF41 [shrimp
white spot syndrome virus] gi|17016433|gb|AAL33039.1|
wsv035 [shrimp white spot syndrome virus]
gi|19481684|gb|AAL88960.1| WSSV092 [shrimp white spot
syndrome virus]
Length = 972
Score = 32.7 bits (73), Expect = 2.2
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = -1
Query: 465 PRPAAAAPEIYGVPHIWARPGDSTQAAALWPMFGARRPPKAHMRQ*S*APSHRSPPANSF 286
P P+ P + +PH+ RP + L P+ +P R AP + P AN
Sbjct: 558 PIPSTVLPPLENIPHVIIRPSSLLHRSCLAPVL--NKPSSGQHRPFCTAPFYIEPAANVL 615
Query: 285 SGASPSSLLAVSKLSS 238
+G P S L++
Sbjct: 616 AGNIPQKPYEHSMLAT 631
>emb|CAB92389.1| hypothetical protein L4325.02 [Leishmania major]
gi|8670835|emb|CAB94952.1| hypothetical predicted protein
P265.43, unknown function [Leishmania major]
Length = 2242
Score = 32.0 bits (71), Expect = 3.7
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 178 LSDETRNLHFRRERRRFNMAA*QLAHSEETRWARSRK*VGWRTAVAGRSALLPHMCL-GR 354
L E R LHFR+E +R AA LA E G RT G +L H+C+ G
Sbjct: 1431 LLQELRELHFRQETQREEQAAVTLASGAE----------GKRTVGRG---ILDHLCISGS 1477
Query: 355 PAGSKHGPQR 384
PA + QR
Sbjct: 1478 PAAALRQHQR 1487
>ref|NP_811871.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482] gi|29340272|gb|AAO78065.1| conserved
hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 460
Score = 32.0 bits (71), Expect = 3.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 427 PTYMGSAWGFHPGSSAVAHVWSPQAAQGTYAAI 329
P +MG W + +SA +VW P GT +I
Sbjct: 277 PMFMGDRWSYPHQASAATYVWMPMQVDGTKLSI 309
>ref|NP_625799.1| crossover junction endodeoxyribonuclease [Streptomyces coelicolor
A3(2)] gi|13431870|sp|Q9L289|RUVC_STRCO Crossover
junction endodeoxyribonuclease ruvC (Holliday junction
nuclease ruvC) (Holliday juction resolvase ruvC)
gi|6822216|emb|CAB70922.1| crossover junction
endodeoxyribonuclease [Streptomyces coelicolor A3(2)]
Length = 188
Score = 31.6 bits (70), Expect = 4.9
Identities = 19/45 (42%), Positives = 23/45 (50%), Gaps = 3/45 (6%)
Frame = -1
Query: 465 PRPAAAAPEI-YGVPHIWARPGDST--QAAALWPMFGARRPPKAH 340
P+PA AA + + HIW P + QA AL G RRP K H
Sbjct: 137 PKPADAADALALAICHIWRAPAQNRLQQAVALHTAQGPRRPHKLH 181
