KCC000356A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC000356A_C01 KCC000356A_c01
CTCTCGACAAACATTTCAGTAAGACACTCAGAGCTCATACGTAGAGCAACAGCTTCACTG
CCATTGTCTTTGAAACAGACTGTTCAGCTTCAGGACCGACTCCTCTTCTTCTCAGGTCTC
CTCGCCTCGCCTCGATGTGTCAACGCACACTTAGAGCTGGAACGGGCCTCCACGCCCGCT
CAGCCGTGCGCCCAGCCAGGCCGCGGCCAGGCCGGAGCAAAGTTGCCACAGTGGTGTGCA
GTGCGCCTGTAGTGCCTGTGACGACCACCACCTCGACTTCTACTTCTTCTACGGATACTA
CTCAGCCAGAGCTAGGCTGGCGGACGGACCTGCGGACCACCTATGTGCTGGGCGCGCAGC
TGGGCGTGGGGTCATTTGGCAGCGTTCACAAGGCGTTCCACGCGGAGTCCGGGGAGCAGG
TCGCTGTGAAAACGCTGCCGAAAGAGCGTCCCAAGCTCAGCCGCGCCAAGGTCCTTGAAA
AGCTCCAAAGGGAGCTGACCCTTCTCGACCGGCTCTCGGACAGCCCACGCGTTGTGCAGC
TTATGGAGTGCTTTGAGGACGAGGACCACGTCTACATCGTTACGGAGGCGTGCGAAGGTG
GTGACTTGCAACGTTTCAGCGACACCTACGGCCCGCTCACGGAGCGCTGCTTGGCCCTAG
TTGCGTTGGAGGTGCTCCAAATCGTCCGCAGCTGCCACCGGTTAGGCATCGTGCACGGCG
ACGTGAAGCCTGCCAACTTCTGCATTAAAGATGAGCACCGTCACCCCTACGCTGCGTCAC
CGGCGGCGCTGCAGCGCTCGCCGTGGCTAAAGGCGATTGACTTTGGCTGCAGCCAGCTGC
ACTACCGCCACGCGCGCCTCTCCAAGCGCTCGGGCACGCCCGTGTACATGGCCCCTGAGA
TCTTTAAGCGGGACTACTCGTTTGAGGTGGACGTGTGGTCGACGGGCGTGCTGCTGTACC
AGCTGTACTGCCGGCACTTCCCCTTCTGGGCCGGCGACAGCTACAACCGCGCTCTCTCCC
TGGACGACGTGGCGAAGGGCATCACGGAGAACGCATTCGCAT
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000356A_C01 KCC000356A_c01
(1062 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF14337.1|U73610_1 ATCDPK1a [Arabidopsis thaliana] 161 2e-38
ref|NP_177612.2| calcium-dependent protein kinase, putative (CDP... 161 2e-38
dbj|BAC83205.1| putative calcium-dependent protein kinase [Oryza... 157 2e-37
pir||S46283 calcium-dependent protein kinase (EC 2.7.1.-) 1 - Ar... 156 5e-37
pir||H86322 calcium-dependent protein kinase 1 [imported] - Arab... 156 7e-37
>gb|AAF14337.1|U73610_1 ATCDPK1a [Arabidopsis thaliana]
Length = 274
Score = 161 bits (408), Expect = 2e-38
Identities = 92/234 (39%), Positives = 132/234 (56%)
Frame = +3
Query: 321 RTDLRTTYVLGAQLGVGSFGSVHKAFHAESGEQVAVKTLPKERPKLSRAKVLEKLQRELT 500
+T + Y+LG +LG G FG + E+ E +A K++ K KL A +E ++RE+T
Sbjct: 4 QTQISDKYILGRELGRGEFGITYLCTDRETREALACKSISKR--KLRTAVDVEDVRREVT 61
Query: 501 LLDRLSDSPRVVQLMECFEDEDHVYIVTEACEGGDLQRFSDTYGPLTERCLALVALEVLQ 680
++ L + P VV+L +ED + V++V E CEGG+L G TER A VA + +
Sbjct: 62 IMSTLPEHPNVVKLKATYEDNETVHLVMELCEGGELFGRIVARGHYTERAAATVARTIAE 121
Query: 681 IVRSCHRLGIVHGDVKPANFCIKDEHRHPYAASPAALQRSPWLKAIDFGCSQLHYRHARL 860
+VR CH G++H D+KP NF ++ + + LKAIDFG S L R
Sbjct: 122 VVRMCHVNGVMHRDLKPENFLFANK------------KENSALKAIDFGLSVLFKPGERF 169
Query: 861 SKRSGTPVYMAPEIFKRDYSFEVDVWSTGVLLYQLYCRHFPFWAGDSYNRALSL 1022
++ G+P YMAPE+ KR+Y EVDVWS GV+LY L C PFWA AL++
Sbjct: 170 TEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAI 223
>ref|NP_177612.2| calcium-dependent protein kinase, putative (CDPK) [Arabidopsis
thaliana] gi|25287686|pir||F96776 hypothetical protein
F25A4.29 [imported] - Arabidopsis thaliana
gi|5882721|gb|AAD55274.1|AC008263_5 Strong similarity to
gb|D21805 calcium-dependent protein kinase (CDPK) from
Arabidopsis thaliana and contains a PF|00069 Eukaryotic
protein kinase and 4 PF|00036 EF hand domains
gi|22655135|gb|AAM98158.1| calcium-dependent protein
kinase, putative [Arabidopsis thaliana]
gi|31711966|gb|AAP68339.1| At1g74740 [Arabidopsis
thaliana]
Length = 541
Score = 161 bits (407), Expect = 2e-38
Identities = 91/234 (38%), Positives = 133/234 (55%)
Frame = +3
Query: 321 RTDLRTTYVLGAQLGVGSFGSVHKAFHAESGEQVAVKTLPKERPKLSRAKVLEKLQRELT 500
++ + Y+LG +LG G FG + E+ E +A K++ K KL A +E ++RE+T
Sbjct: 52 QSQISDKYILGRELGRGEFGITYLCTDRETREALACKSISKR--KLRTAVDVEDVRREVT 109
Query: 501 LLDRLSDSPRVVQLMECFEDEDHVYIVTEACEGGDLQRFSDTYGPLTERCLALVALEVLQ 680
++ L + P VV+L +ED ++V++V E CEGG+L G TER A VA + +
Sbjct: 110 IMSTLPEHPNVVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYTERAAATVARTIAE 169
Query: 681 IVRSCHRLGIVHGDVKPANFCIKDEHRHPYAASPAALQRSPWLKAIDFGCSQLHYRHARL 860
+VR CH G++H D+KP NF ++ + + LKAIDFG S L R
Sbjct: 170 VVRMCHVNGVMHRDLKPENFLFANK------------KENSALKAIDFGLSVLFKPGERF 217
Query: 861 SKRSGTPVYMAPEIFKRDYSFEVDVWSTGVLLYQLYCRHFPFWAGDSYNRALSL 1022
++ G+P YMAPE+ KR+Y EVDVWS GV+LY L C PFWA AL++
Sbjct: 218 TEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAI 271
>dbj|BAC83205.1| putative calcium-dependent protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 550
Score = 157 bits (398), Expect = 2e-37
Identities = 86/222 (38%), Positives = 127/222 (56%)
Frame = +3
Query: 327 DLRTTYVLGAQLGVGSFGSVHKAFHAESGEQVAVKTLPKERPKLSRAKVLEKLQRELTLL 506
D+ Y LG +LG G FG + E+G+ A K++ K+ KL A +E ++RE+ ++
Sbjct: 70 DIAARYELGGELGRGEFGVTYLCTERETGDAYACKSISKK--KLRTAVDIEDVRREVDIM 127
Query: 507 DRLSDSPRVVQLMECFEDEDHVYIVTEACEGGDLQRFSDTYGPLTERCLALVALEVLQIV 686
L P +V L + +ED++ V++V E CEGG+L G TER ALV ++++V
Sbjct: 128 RHLPKHPNIVTLRDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAALVTRTIVEVV 187
Query: 687 RSCHRLGIVHGDVKPANFCIKDEHRHPYAASPAALQRSPWLKAIDFGCSQLHYRHARLSK 866
+ CH+ G++H D+KP NF ++ + + LKAIDFG S R ++
Sbjct: 188 QMCHKHGVMHRDLKPENFLFANK------------KETAALKAIDFGLSVFFTPGERFTE 235
Query: 867 RSGTPVYMAPEIFKRDYSFEVDVWSTGVLLYQLYCRHFPFWA 992
G+P YMAPE+ KR+Y EVDVWS GV+LY L C PFWA
Sbjct: 236 IVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWA 277
>pir||S46283 calcium-dependent protein kinase (EC 2.7.1.-) 1 - Arabidopsis
thaliana gi|604880|dbj|BAA04829.1| calcium-dependent
protein kinase [Arabidopsis thaliana]
Length = 493
Score = 156 bits (395), Expect = 5e-37
Identities = 89/234 (38%), Positives = 130/234 (55%)
Frame = +3
Query: 321 RTDLRTTYVLGAQLGVGSFGSVHKAFHAESGEQVAVKTLPKERPKLSRAKVLEKLQRELT 500
+T + Y+LG +LG G FG + E+ E +A K++ K KL A +E ++RE+
Sbjct: 4 QTQISDKYILGRELGRGEFGITYLCTDRETHEALACKSISKR--KLRTAVDIEDVRREVA 61
Query: 501 LLDRLSDSPRVVQLMECFEDEDHVYIVTEACEGGDLQRFSDTYGPLTERCLALVALEVLQ 680
++ L + P VV+L +ED ++V++V E CEGG+L G TER A VA + +
Sbjct: 62 IMSTLPEHPNVVKLKASYEDNENVHLVMELCEGGELFDRIVARGHYTERAAAAVARTIAE 121
Query: 681 IVRSCHRLGIVHGDVKPANFCIKDEHRHPYAASPAALQRSPWLKAIDFGCSQLHYRHARL 860
+V CH G++H D+KP NF ++ + SP LKAIDFG S +
Sbjct: 122 VVMMCHSNGVMHRDLKPENFLFANKK-----------ENSP-LKAIDFGLSVFFKPGDKF 169
Query: 861 SKRSGTPVYMAPEIFKRDYSFEVDVWSTGVLLYQLYCRHFPFWAGDSYNRALSL 1022
++ G+P YMAPE+ KRDY VDVWS GV++Y L C PFWA AL++
Sbjct: 170 TEIVGSPYYMAPEVLKRDYGPGVDVWSAGVIIYILLCGAPPFWAETEQGVALAI 223
>pir||H86322 calcium-dependent protein kinase 1 [imported] - Arabidopsis thaliana
gi|6730697|gb|AAF27092.1|AC011809_1 calcium-dependent
protein kinase 1 [Arabidopsis thaliana]
Length = 545
Score = 156 bits (394), Expect = 7e-37
Identities = 89/234 (38%), Positives = 130/234 (55%)
Frame = +3
Query: 321 RTDLRTTYVLGAQLGVGSFGSVHKAFHAESGEQVAVKTLPKERPKLSRAKVLEKLQRELT 500
+T + Y+LG +LG G FG + E+ E +A K++ K KL A +E ++RE+
Sbjct: 56 QTQISDKYILGRELGRGEFGITYLCTDRETHEALACKSISKR--KLRTAVDIEDVRREVA 113
Query: 501 LLDRLSDSPRVVQLMECFEDEDHVYIVTEACEGGDLQRFSDTYGPLTERCLALVALEVLQ 680
++ L + P VV+L +ED ++V++V E CEGG+L G TER A VA + +
Sbjct: 114 IMSTLPEHPNVVKLKASYEDNENVHLVMELCEGGELFDRIVARGHYTERAAAAVARTIAE 173
Query: 681 IVRSCHRLGIVHGDVKPANFCIKDEHRHPYAASPAALQRSPWLKAIDFGCSQLHYRHARL 860
+V CH G++H D+KP NF ++ + SP LKAIDFG S +
Sbjct: 174 VVMMCHSNGVMHRDLKPENFLFANKK-----------ENSP-LKAIDFGLSVFFKPGDKF 221
Query: 861 SKRSGTPVYMAPEIFKRDYSFEVDVWSTGVLLYQLYCRHFPFWAGDSYNRALSL 1022
++ G+P YMAPE+ KRDY VDVWS GV++Y L C PFWA AL++
Sbjct: 222 TEIVGSPYYMAPEVLKRDYGPGVDVWSAGVIIYILLCGVPPFWAETEQGVALAI 275
EST assemble image
|
|
|
|
|
|
clone |
accession |
position |
| 1 |
HCL079f10_r |
AV643987 |
1 |
563 |
| 2 |
HCL050e06_r |
AV642364 |
39 |
656 |
| 3 |
HCL059d09_r |
AV642861 |
88 |
605 |
| 4 |
HCL018e05_r |
AV640572 |
102 |
472 |
| 5 |
HCL063g03_r |
AV643099 |
102 |
579 |
| 6 |
LCL040g05_r |
AV628374 |
103 |
412 |
| 7 |
LCL007g08_r |
AV626360 |
104 |
212 |
| 8 |
LCL012b02_r |
AV626599 |
104 |
644 |
| 9 |
LCL037e05_r |
AV628150 |
104 |
656 |
| 10 |
HCL042h07_r |
AV641947 |
106 |
525 |
| 11 |
HCL020e01_r |
AV640681 |
107 |
234 |
| 12 |
LCL087b07_r |
AV630978 |
107 |
609 |
| 13 |
HCL027d09_r |
AV641081 |
108 |
608 |
| 14 |
HCL018g12_r |
AV640593 |
109 |
612 |
| 15 |
HCL083h06_r |
AV644205 |
111 |
646 |
| 16 |
MXL007f12_r |
BP093385 |
111 |
543 |
| 17 |
HCL053a08_r |
AV642508 |
114 |
581 |
| 18 |
CL48c08_r |
AV395802 |
114 |
643 |
| 19 |
HCL065h09_r |
AV643223 |
114 |
605 |
| 20 |
HCL040g03_r |
AV641813 |
114 |
648 |
| 21 |
LCL050g12_r |
AV629040 |
114 |
640 |
| 22 |
CL36b09_r |
AV395143 |
121 |
613 |
| 23 |
CL21f06_r |
AV394364 |
121 |
647 |
| 24 |
CL41d11_r |
AV395394 |
123 |
584 |
| 25 |
MXL064b09_r |
BP096746 |
123 |
460 |
| 26 |
HCL068f03_r |
AV643380 |
123 |
587 |
| 27 |
LCL092e10_r |
AV631356 |
123 |
415 |
| 28 |
HCL016g10_r |
AV640467 |
123 |
591 |
| 29 |
HCL041h10_r |
AV641890 |
123 |
543 |
| 30 |
HCL077f06_r |
AV643880 |
123 |
557 |
| 31 |
HCL046f04_r |
AV642159 |
124 |
609 |
| 32 |
HCL031a04_r |
AV641282 |
125 |
532 |
| 33 |
HCL039b08_r |
AV641713 |
130 |
656 |
| 34 |
HCL055a04_r |
AV642627 |
130 |
573 |
| 35 |
LCL098a05_r |
AV631673 |
134 |
579 |
| 36 |
LCL092d03_r |
AV631344 |
136 |
273 |
| 37 |
LCL027a08_r |
AV627457 |
149 |
310 |
| 38 |
HCL066b06_r |
AV643237 |
153 |
621 |
| 39 |
CL40g01_r |
AV395340 |
175 |
686 |
| 40 |
HCL056b06_r |
AV642692 |
246 |
728 |
| 41 |
HCL063h01_r |
AV643107 |
523 |
1000 |
| 42 |
HCL090c08_r |
AV644542 |
531 |
726 |
| 43 |
MXL048a11_r |
BP095833 |
641 |
1169 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute