KCC000352A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC000352A_C01 KCC000352A_c01
TCCACACAAGCACACTGAATACTCGCTGCTCCCTTCGCCCACTACTAATACTAGTCCTTC
CTCTCGCGCCGCGAGTCCTTTCCTTCGTCGCCGCTCAAGAATGCCTCTGGCCCTTCAAGC
TGCCCCTGGGATGCCTACATCCTGGATGGCTGCCCATCACCTACGGCCAGCGCTGGCCTT
CGTCGGCGATGGTGCGTGCCCGGTGGGTGGCCCCACCGGCTGACCCCGGAGACCTCCAGC
ATCGCCTACTACGAAGACGAGCAGAAGAGCGCCGCCGCGGCCCAGCGCTACGACAACTCG
TTTAAGCAGTTCTTCGATGCCCGCATCCGCAACCACAAGGTCGGCGTGTTCCAGAACTGG
ATGCCCAACAGCCCTCAGTAAAGCGATGCCATTAGGATTGGTCGCAGCGCAGCATGTGAT
GAGCTGCAGAGGCTTAGCCCTGATGCGCAGGCAGTGGCATTGAGCGCGTGATTGGGCGCG
GAAGACTGTTGACTCCTATAAAGTGTAGAATTCATCTTGCCCAATTTTTTGCGGGGACTT
TGCGAGAGGGCATGGGCGCCCCTTGGCGTGAGTTGCAGTGCGCACGACGCCGCGCGACCC
CGCGTAGCAGGAGTGACCCCCTTGGTTGCGGGGGTCTGAAGCTTGACGCTGACTTGAATG
ACGGCTGACCCACATGGCATGACTCTTGTGACTTCGATGTCACCACACGCACACACACAC
GGTTGACCAAGACGACGATTTACTTGACAAACGCTTGTGACTGCTGCTTGACTGGTAGCT
TTGTATATGAAGACATCAATCTGGCGATTTATGAAATGCTGCTAGCACGGCGGTGACATC
GTGGGCTGTCGTAAGATTGAAGAGAGCCGTACGTGATGCCCTTCGTCTATGGCAGAGGCT
TTGAGTAGGCTAGGAACGTGACTCTTGGTTCGCAACTACATAGGAGAGTCGGTTTGTGGA
GCTTCAATATGTGACCCAAATGAATAACCCGAGATTGTGTGCGCAACTCGCCACACCGGG
AATTGACAGTGAGCAACGGCGCGCCCCTGCGGACGCCTGACAGTTGTAACTGATCACGAC
Gc
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000352A_C01 KCC000352A_c01
(1082 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_048104.2| similar to profilaggrin - human (fragments) [Ho... 44 0.005
emb|CAB46679.1| proteophosphoglycan [Leishmania major] 43 0.011
pir||H84824 En/Spm-like transposon protein [imported] - Arabidop... 42 0.019
gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major] 42 0.019
ref|NP_181536.2| En/Spm-related transposon protein [Arabidopsis ... 42 0.019
>ref|XP_048104.2| similar to profilaggrin - human (fragments) [Homo sapiens]
Length = 5689
Score = 43.9 bits (102), Expect = 0.005
Identities = 35/120 (29%), Positives = 54/120 (44%), Gaps = 9/120 (7%)
Frame = -2
Query: 361 SSSGTRRPCGCGCGHRRTA*TSCRSAGPRRRSSARLRSRRCWRSPGSAGGATHR------ 200
SS G R G H+++A +S S PR ++S+ +R R W S GS +
Sbjct: 4924 SSPGERH----GSRHQQSADSSRHSGIPRGQASSAVRDSRHWGSSGSQASDSEGHSEESD 4979
Query: 199 ARTIADEGQRWP*VMGSHPGCRHPRGSLKGQRHS*---AATKERTRGARGRTSISSGRRE 29
++++ GQ P R G G+ S +T E++ A GRT S+GRR+
Sbjct: 4980 TQSVSGHGQAGPHQQSHQESARDRSGGRSGRSGSFLYQVSTHEQSESAHGRTRTSTGRRQ 5039
Score = 42.7 bits (99), Expect = 0.011
Identities = 35/120 (29%), Positives = 54/120 (44%), Gaps = 9/120 (7%)
Frame = -2
Query: 361 SSSGTRRPCGCGCGHRRTA*TSCRSAGPRRRSSARLRSRRCWRSPGSAGGATH------R 200
SS G R G H+++A +S S PRR++S+ +R W S GS +
Sbjct: 2655 SSPGERH----GSRHQQSADSSRHSGIPRRQASSAVRDSGHWGSSGSQASDSEGHSEESD 2710
Query: 199 ARTIADEGQRWP*VMGSHPGCRHPRGSLKGQRHS---*AATKERTRGARGRTSISSGRRE 29
++++ GQ P R G G+ S +T E++ A GRT S+GRR+
Sbjct: 2711 TQSVSGHGQDGPHQQSHQESARDWSGGRSGRSGSFIYQVSTHEQSESAHGRTRTSTGRRQ 2770
>emb|CAB46679.1| proteophosphoglycan [Leishmania major]
Length = 873
Score = 42.7 bits (99), Expect = 0.011
Identities = 30/123 (24%), Positives = 59/123 (47%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
S PS +++++PSS +++P S P + +AP +S A + + P
Sbjct: 745 SSAPSASSSSAPSSSSSAPSASSSSA-PSSSSSAPSASSS-SAPSSSSSSAPSASSSSAP 802
Query: 203 VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
+ P +S + +S AP S++ SSSS P+++++ ++ S + P+A S
Sbjct: 803 SSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSASSSSSSAPSASSS 862
Query: 383 AMP 391
+ P
Sbjct: 863 SAP 865
Score = 41.2 bits (95), Expect = 0.032
Identities = 30/121 (24%), Positives = 58/121 (47%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
S PS +++++PS+ ++S S P A ++ P+S +A + A + P
Sbjct: 659 SSAPSSSSSSAPSASSSSAPSSSSSSAPSA--SSSSAPSSSSSAPSASSSSAPSSSSSAP 716
Query: 203 VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
+ P +S + +S AP S++ SSSS P+S+++ + S + P++ S
Sbjct: 717 SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 776
Query: 383 A 385
A
Sbjct: 777 A 777
Score = 38.9 bits (89), Expect = 0.16
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWM----------AAHHLRPA 172
S PS +++++PSS +++P S + +AP +S A+ P+
Sbjct: 636 SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 695
Query: 173 LAFVGDGACPVGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRL---SSSSMPASATTRS 343
+ A P+ P AS ++ S + PSA+++ SSSS P+++++ +
Sbjct: 696 SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSA 755
Query: 344 ACSRTGCPTALSKAMP 391
S + P+A S + P
Sbjct: 756 PSSSSSAPSASSSSAP 771
Score = 38.5 bits (88), Expect = 0.20
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
S PS +++++PS+ ++S S P A ++ P+S +A + A + P
Sbjct: 721 SSAPSSSSSSAPSASSSSAPSSSSSSAPSA--SSSSAPSSSSSAPSASSSSAPSSSSSAP 778
Query: 203 VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRS-ACSRTGCPTALS 379
+ P +S + +S AP S++ SSSS P+S+++ + + S + P++ S
Sbjct: 779 SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSS 838
Query: 380 KAMP 391
+ P
Sbjct: 839 SSAP 842
>pir||H84824 En/Spm-like transposon protein [imported] - Arabidopsis thaliana
gi|2088658|gb|AAB95292.1| En/Spm-like transposon protein
[Arabidopsis thaliana]
Length = 510
Score = 42.0 bits (97), Expect = 0.019
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 38 PTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACPVGGPT 217
P T TS + +++ R ++PG+ +S A+ RP+ + GGP
Sbjct: 108 PATLTSRLANSSTESAARNHLTSRQQTSSPGLSSSSGASR--RPSSS---------GGPG 156
Query: 218 G*PRRPPASPTTKTSRRAPPRPSATTTR--LSSSSMPASATTRSACSRTGCPTALSKAMP 391
P P +T T+ RPS T+R +SS++ P+ +RS S T PT +S++
Sbjct: 157 SRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTS 216
Query: 392 L 394
L
Sbjct: 217 L 217
Score = 38.9 bits (89), Expect = 0.16
Identities = 48/147 (32%), Positives = 64/147 (42%), Gaps = 11/147 (7%)
Frame = +2
Query: 32 PSPTTNTSPS-SRAASPFLRRR----SRMP-LALQAAPGMPTSW----MAAHHLRPALAF 181
P PT + +P+ SRAASP +R R S MP +L+ P + T+ ++A RP
Sbjct: 321 PMPTPSKNPALSRAASPTVRSRPWKPSDMPGFSLETPPNLRTTLPERPLSATRGRPGAPS 380
Query: 182 VGDGACPVGGPT-G*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRT 358
G+ GGP G PRR SP SR P S S SS+PA S S
Sbjct: 381 SRSGSVEPGGPPGGRPRRQSCSP----SRGRAPMYS------SGSSVPAVNRGYSKASDN 430
Query: 359 GCPTALSKAMPLGLVAAQHVMSCRGLA 439
P + M + V++ R LA
Sbjct: 431 VSPVMMGTKM------VERVINMRKLA 451
>gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]
Length = 1325
Score = 42.0 bits (97), Expect = 0.019
Identities = 30/123 (24%), Positives = 58/123 (46%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
S PS +++++PSS +++P S P + +AP +S A + + P
Sbjct: 850 SSAPSASSSSAPSSSSSAPSASSSSA-PSSSSSAPSASSS-SAPSSSSSSAPSASSSSAP 907
Query: 203 VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
+ P +S + +S AP S++ SSSS P+++++ + S + P+A S
Sbjct: 908 SSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS 967
Query: 383 AMP 391
+ P
Sbjct: 968 SAP 970
Score = 42.0 bits (97), Expect = 0.019
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGM-----PTSWMAAHHLRPALAFVG 187
S PS +++++PSS +++P S P + +AP P+S +A + A
Sbjct: 683 SSAPSASSSSAPSSSSSAPSASSSSA-PSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 741
Query: 188 DGACPVGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCP 367
+ P + P ++P+ +S AP S++ SSSS P+S+++ + S + P
Sbjct: 742 SSSAPSASSSSAPSSSSSAPSASSSS-APSSSSSSAPSASSSSAPSSSSSAPSASSSSAP 800
Query: 368 TALSKAMP 391
++ S + P
Sbjct: 801 SSSSSSAP 808
Score = 41.6 bits (96), Expect = 0.024
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGM-----PTSWMAAHHLRPALAFVG 187
S PS +++++PSS +++P S + +AP P+S +A + A
Sbjct: 774 SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 833
Query: 188 DGACPVGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCP 367
+ P + P ++P+ +S + P S++ SSSS P+S+++ + S + P
Sbjct: 834 SSSAPSASSSSAPSSSSSAPSASSS--SAPSSSSSAPSASSSSAPSSSSSAPSASSSSAP 891
Query: 368 TALSKAMP 391
++ S + P
Sbjct: 892 SSSSSSAP 899
Score = 41.2 bits (95), Expect = 0.032
Identities = 32/125 (25%), Positives = 59/125 (46%), Gaps = 2/125 (1%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
S PS +++++PSS ++S S P + +AP +S P+ + A
Sbjct: 974 SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS------SAPSSSSSAPSASS 1027
Query: 203 VGGPTG*PRRPPASPTT--KTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTAL 376
P+ P AS ++ +S AP S++ SSSS P+++++ + S + P+A
Sbjct: 1028 SSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSAS 1087
Query: 377 SKAMP 391
S + P
Sbjct: 1088 SSSAP 1092
Score = 39.7 bits (91), Expect = 0.092
Identities = 32/129 (24%), Positives = 62/129 (47%), Gaps = 6/129 (4%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGM-----PTSWMAAHHLRPALAFVG 187
S PS +++++PSS +++P S P + +AP P+S +A + A
Sbjct: 820 SSAPSASSSSAPSSSSSAPSASSSSA-PSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 878
Query: 188 DGACPVGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRS-ACSRTGC 364
+ P + P +S + +S AP S++ SSSS P+S+++ + + S +
Sbjct: 879 SSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSA 938
Query: 365 PTALSKAMP 391
P++ S + P
Sbjct: 939 PSSSSSSAP 947
Score = 39.7 bits (91), Expect = 0.092
Identities = 28/121 (23%), Positives = 55/121 (45%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
S PS +++++PSS +++P S + +AP +S + + P
Sbjct: 865 SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSS---------SSSSAP 915
Query: 203 VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
+ P +S + +S AP S++ SSSS P+S+++ + S + P++ S
Sbjct: 916 SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 975
Query: 383 A 385
A
Sbjct: 976 A 976
Score = 38.1 bits (87), Expect = 0.27
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAP-----GMPTSWMAAHHLRPALAFVG 187
S PS +++++PSS +++P S P + +AP P+S +A + A
Sbjct: 805 SSAPSASSSSAPSSSSSAP-SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 863
Query: 188 DGACPVGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRS-ACSRTGC 364
+ P + P ++P+ +S AP S++ SSSS P+S+++ + + S +
Sbjct: 864 SSSAPSASSSSAPSSSSSAPSASSS-SAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSA 922
Query: 365 PTALSKAMP 391
P++ S + P
Sbjct: 923 PSSSSSSAP 931
Score = 38.1 bits (87), Expect = 0.27
Identities = 30/123 (24%), Positives = 59/123 (47%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
S PS +++++PSS +++P S P + +AP +S +A + + P
Sbjct: 713 SSAPSASSSSAPSSSSSAPSASSSSA-PSSSSSAPSASSS--SAPSSSSSAPSASSSSAP 769
Query: 203 VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
+ P +S + +S AP S++ SSSS P+++++ + S + P+A S
Sbjct: 770 SSSSSSAPSASSSSAPSSSSS-APSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS 828
Query: 383 AMP 391
+ P
Sbjct: 829 SAP 831
Score = 38.1 bits (87), Expect = 0.27
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
S PS +++++PSS ++S S P + +AP +S P+ + A
Sbjct: 928 SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS------SAPSSSSSAPSASS 981
Query: 203 VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRL--SSSSMPASATTRSACSRTGCPTAL 376
P+ P++ ++ + PSA+++ SSSS P+++++ + S + P+A
Sbjct: 982 SSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSAS 1041
Query: 377 SKAMP 391
S + P
Sbjct: 1042 SSSAP 1046
Score = 37.0 bits (84), Expect = 0.60
Identities = 27/123 (21%), Positives = 57/123 (45%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
S PS +++++PSS ++S S P + ++ +S A + + P
Sbjct: 896 SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAP 955
Query: 203 VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
+ ++P++ +S AP S++ SSSS P+++++ + S + P+A S
Sbjct: 956 SSSSSAPSASSSSAPSSSSS--APSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS 1013
Query: 383 AMP 391
+ P
Sbjct: 1014 SAP 1016
Score = 35.8 bits (81), Expect = 1.3
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAP-----GMPTSWMAAHHLRPALAFVG 187
S PS +++++ SS +++P S P + +AP P+S +A + A
Sbjct: 668 SSAPSASSSSASSSSSSAP-SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 726
Query: 188 DGACPVGGPTG*PRRPPASPTT------KTSRRAPPRPSATTTRLSSSSMPASATTRSAC 349
+ P + P ++P+ +S AP S++ SSSS P+++++ +
Sbjct: 727 SSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 786
Query: 350 SRTGCPTALSKAMP 391
S + P+A S + P
Sbjct: 787 SSSSAPSASSSSAP 800
Score = 34.3 bits (77), Expect = 3.9
Identities = 29/127 (22%), Positives = 63/127 (48%), Gaps = 4/127 (3%)
Frame = +2
Query: 23 SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWM-AAHHLRPALAFVGDGAC 199
S PS +++++PSS ++S S P + +AP +S ++ P+ + +
Sbjct: 789 SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 848
Query: 200 PVGGPTG*PRRPPASPTTKTSRRAPPRPSATTT--RLSSSSMPASATTRS-ACSRTGCPT 370
P+ P+S ++ S + PS++++ SSSS P+S+++ + + S + P+
Sbjct: 849 SSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 908
Query: 371 ALSKAMP 391
+ S + P
Sbjct: 909 SSSSSAP 915
>ref|NP_181536.2| En/Spm-related transposon protein [Arabidopsis thaliana]
Length = 580
Score = 42.0 bits (97), Expect = 0.019
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 38 PTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACPVGGPT 217
P T TS + +++ R ++PG+ +S A+ RP+ + GGP
Sbjct: 108 PATLTSRLANSSTESAARNHLTSRQQTSSPGLSSSSGASR--RPSSS---------GGPG 156
Query: 218 G*PRRPPASPTTKTSRRAPPRPSATTTR--LSSSSMPASATTRSACSRTGCPTALSKAMP 391
P P +T T+ RPS T+R +SS++ P+ +RS S T PT +S++
Sbjct: 157 SRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTS 216
Query: 392 L 394
L
Sbjct: 217 L 217
Score = 38.9 bits (89), Expect = 0.16
Identities = 48/147 (32%), Positives = 64/147 (42%), Gaps = 11/147 (7%)
Frame = +2
Query: 32 PSPTTNTSPS-SRAASPFLRRR----SRMP-LALQAAPGMPTSW----MAAHHLRPALAF 181
P PT + +P+ SRAASP +R R S MP +L+ P + T+ ++A RP
Sbjct: 321 PMPTPSKNPALSRAASPTVRSRPWKPSDMPGFSLETPPNLRTTLPERPLSATRGRPGAPS 380
Query: 182 VGDGACPVGGPT-G*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRT 358
G+ GGP G PRR SP SR P S S SS+PA S S
Sbjct: 381 SRSGSVEPGGPPGGRPRRQSCSP----SRGRAPMYS------SGSSVPAVNRGYSKASDN 430
Query: 359 GCPTALSKAMPLGLVAAQHVMSCRGLA 439
P + M + V++ R LA
Sbjct: 431 VSPVMMGTKM------VERVINMRKLA 451
EST assemble image
|
|
|
|
|
|
clone |
accession |
position |
| 1 |
HC057e11_r |
AV636291 |
1 |
512 |
| 2 |
HC010f04_r |
AV632633 |
4 |
632 |
| 3 |
HC055h03_r |
AV636153 |
8 |
610 |
| 4 |
HC057b05_r |
AV636257 |
13 |
629 |
| 5 |
HC013d07_r |
AV632848 |
20 |
625 |
| 6 |
MX053g04_r |
BP088193 |
20 |
230 |
| 7 |
HC046d05_r |
AV635441 |
23 |
630 |
| 8 |
CM036c01_r |
AV388771 |
68 |
335 |
| 9 |
LC021f09_r |
AV620400 |
98 |
631 |
| 10 |
CM050a04_r |
AV389744 |
99 |
395 |
| 11 |
CM037f04_r |
AV388883 |
100 |
652 |
| 12 |
LCL078d11_r |
AV630409 |
100 |
385 |
| 13 |
CM060a07_r |
AV390773 |
101 |
724 |
| 14 |
CM022g04_r |
AV387833 |
101 |
711 |
| 15 |
LC093b05_r |
AV625472 |
102 |
384 |
| 16 |
HC053a01_r |
AV635937 |
103 |
598 |
| 17 |
LC079b08_r |
AV624541 |
103 |
610 |
| 18 |
LC076c02_r |
AV624329 |
103 |
672 |
| 19 |
LC050c10_r |
AV622484 |
103 |
505 |
| 20 |
LC018e03_r |
AV620165 |
103 |
643 |
| 21 |
LC068a03_r |
AV623737 |
103 |
593 |
| 22 |
MX049a02_r |
BP087995 |
103 |
486 |
| 23 |
LC082g04_r |
AV624789 |
103 |
672 |
| 24 |
LC073c05_r |
AV624122 |
104 |
615 |
| 25 |
HC059g05_r |
AV636459 |
105 |
690 |
| 26 |
CM066b10_r |
AV390807 |
105 |
710 |
| 27 |
HC034g06_r |
AV634543 |
105 |
628 |
| 28 |
CM062e03_r |
AV390176 |
106 |
733 |
| 29 |
HC080b03_r |
AV637972 |
106 |
629 |
| 30 |
HC080c08_r |
AV637986 |
106 |
567 |
| 31 |
CM088c11_r |
AV393021 |
106 |
758 |
| 32 |
CM019g03_r |
AV387305 |
106 |
706 |
| 33 |
CM014h05_r |
AV387400 |
106 |
720 |
| 34 |
CL21d01_r |
AV394375 |
106 |
626 |
| 35 |
HC038c03_r |
AV634812 |
106 |
675 |
| 36 |
CM061e08_r |
AV390612 |
106 |
717 |
| 37 |
LC089c06_r |
AV625207 |
107 |
636 |
| 38 |
CM027h09_r |
AV387602 |
108 |
747 |
| 39 |
LCL014h06_r |
AV626753 |
108 |
492 |
| 40 |
MX054a01_r |
BP088205 |
108 |
631 |
| 41 |
HC033d11_r |
AV634442 |
108 |
678 |
| 42 |
CM044h08_r |
AV389559 |
108 |
705 |
| 43 |
CM030b03_r |
AV397421 |
108 |
758 |
| 44 |
MX068d06_r |
BP088767 |
108 |
557 |
| 45 |
CM080b05_r |
AV392044 |
108 |
751 |
| 46 |
MX214g10_r |
BP089844 |
108 |
586 |
| 47 |
HC048h06_r |
AV635636 |
108 |
609 |
| 48 |
HC048a06_r |
AV635571 |
108 |
635 |
| 49 |
HC025f12_r |
AV633821 |
108 |
660 |
| 50 |
CM048b03_r |
AV389067 |
108 |
438 |
| 51 |
LC058a09_r |
AV623035 |
109 |
545 |
| 52 |
CM043c01_r |
AV389459 |
110 |
304 |
| 53 |
LCL024a12_r |
AV627267 |
110 |
645 |
| 54 |
CM087a08_r |
AV392471 |
110 |
687 |
| 55 |
CM014a03_r |
AV387380 |
110 |
729 |
| 56 |
LCL025d07_r |
AV627349 |
110 |
574 |
| 57 |
HC003b11_r |
AV632043 |
112 |
537 |
| 58 |
LC034a10_r |
AV621297 |
112 |
643 |
| 59 |
HC095h06_r |
AV639172 |
112 |
536 |
| 60 |
LC034c04_r |
AV621313 |
112 |
667 |
| 61 |
HC039b10_r |
AV634879 |
113 |
633 |
| 62 |
HC062b09_r |
AV636638 |
113 |
658 |
| 63 |
MX017g03_r |
BP086827 |
113 |
531 |
| 64 |
MX018a02_r |
BP086836 |
113 |
537 |
| 65 |
CL55e09_r |
AV396010 |
113 |
688 |
| 66 |
CM044g07_r |
AV389572 |
113 |
690 |
| 67 |
HC053c07_r |
AV635956 |
113 |
608 |
| 68 |
LC094f08_r |
AV625563 |
113 |
507 |
| 69 |
HC099e05_r |
AV639447 |
113 |
567 |
| 70 |
LCL096b05_r |
AV631557 |
113 |
606 |
| 71 |
CM099f12_r |
AV393160 |
114 |
628 |
| 72 |
LC089a12_r |
AV625191 |
114 |
646 |
| 73 |
CM037d02_r |
AV388839 |
114 |
642 |
| 74 |
LC048h06_r |
AV622379 |
114 |
672 |
| 75 |
LC020a09_r |
AV620284 |
114 |
634 |
| 76 |
CM076a12_r |
AV391716 |
114 |
715 |
| 77 |
LC080h10_r |
AV624664 |
114 |
632 |
| 78 |
CM055f04_r |
AV390260 |
115 |
741 |
| 79 |
MX237e12_r |
BP091359 |
116 |
373 |
| 80 |
HC078e08_r |
AV637858 |
116 |
633 |
| 81 |
CM026c03_r |
AV387560 |
117 |
710 |
| 82 |
MX017h12_r |
BP086834 |
118 |
555 |
| 83 |
CM059e04_r |
AV390668 |
118 |
781 |
| 84 |
HC049h01_r |
AV635707 |
118 |
615 |
| 85 |
CM046e11_r |
AV387995 |
118 |
421 |
| 86 |
HC074e09_r |
AV637552 |
118 |
604 |
| 87 |
HC022d03_r |
AV633566 |
118 |
601 |
| 88 |
HC072d05_r |
AV637377 |
118 |
687 |
| 89 |
CM092d05_r |
AV392660 |
118 |
566 |
| 90 |
HCL076g11_r |
AV643830 |
118 |
643 |
| 91 |
CM099h03_r |
AV393155 |
119 |
689 |
| 92 |
MX045e06_r |
BP087875 |
119 |
634 |
| 93 |
HC059e06_r |
AV636441 |
119 |
691 |
| 94 |
CM034h04_r |
AV388615 |
120 |
644 |
| 95 |
MXL017h03_r |
BP094079 |
122 |
702 |
| 96 |
MXL014h06_r |
BP093864 |
122 |
609 |
| 97 |
HC030a02_r |
AV634159 |
122 |
658 |
| 98 |
HC039d08_r |
AV634898 |
122 |
654 |
| 99 |
CM032a12_r |
AV388468 |
124 |
715 |
| 100 |
LC069d12_r |
AV623844 |
124 |
646 |
| 101 |
LC057c10_r |
AV622978 |
125 |
640 |
| 102 |
CL71c01_r |
AV396898 |
125 |
690 |
| 103 |
HC083f09_r |
AV638238 |
125 |
483 |
| 104 |
LCL048h04_r |
AV628911 |
126 |
375 |
| 105 |
CL49h09_r |
AV397728 |
129 |
714 |
| 106 |
HC001c08_r |
AV631886 |
129 |
580 |
| 107 |
HC069a07_r |
AV637123 |
135 |
584 |
| 108 |
HC062f10_r |
AV636674 |
154 |
617 |
| 109 |
HC031b02_r |
AV634256 |
159 |
704 |
| 110 |
HC019b06_r |
AV633299 |
205 |
707 |
| 111 |
MX051h09_r |
BP088111 |
639 |
1067 |
| 112 |
HC067b02_r |
AV636988 |
683 |
1124 |
| 113 |
HC028f03_r |
AV634051 |
758 |
1248 |
| 114 |
HCL096h07_r |
AV645007 |
1017 |
1210 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute