KCC000348A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000348A_C01 KCC000348A_c01
ACTAAAATGCAGCTCCTGAACAGCAAGTCCCGTGTTCTGTCTGGCTCTCGCCAGCAGGCG
GCCGCTAAGGCCGTCCGCGTGGCTCCTTCTGGCCGTCGCTCGGCTGTGCGCGTGAGCGCC
GCGGTGCACCTGGACTTCAACACCAAGGTGTTCCAGAAGGAGCATGCCAAGTTCGGCCCC
ACTGAGGAGTACATTGTGCGCGGTGGCCGCGACAAGTACCCTCTGCTGAAGGAGGCGTTC
AAGGGCATCAAGAAGGTTTCGGTCATCGGCTGGGGCTCCCAGGCGCCCGCCCAGGCCCAG
AACCTGCGCGACTCGATTGCTGAGGCTGGCATGGACATCAAGGTCGCTATTGGCCTGCGC
CCGGACTCTCCCTCGTGGGCCGAGGCTGAGGCTTGCGGGTTCAGCAAGACGGACGGTACT
CTGGGCGAGGTCTTCGAGCAGATTTCCTCTTCGGACTTCGTTATTCTGCTGATCTCTGAT
GCTGCTCAGGCCAAGCTGTACCCCCGCATCCTGGCTGCCATGAAGCCCGGTGCCACTCTG
GGTCTGAGCCATGGCTTCCTGCTGGGCGTCATGCGCAACGACGGTGTGGACTTCCGCAAG
GACATCAATGTCGTGCTGGTGGCCCCCAAGGGTATGGGCCCGTCGGTGCGCCGCCTCTAT
GAGCAGGGCAAGTCCGTCAACGGCGCGGGCATCAACTGCTCGTTCGCCATCCAGCAGGAC
GCCACTGGCCAGGCCGCGGATATCGCTATCGGCTGGGCCATCGGTGTGGGCGCTCCCTTC
GCCTTCCCCACCACCCTGGAGTCTGAGTACAAGTCGGACATCTACGGCGAGCGCTGCGTG
CTGCTGGGCGCCGTGCACGGCATTGTGGAGGCGCTGTTCCGCCGCTACACCCGCCAGGGC
ATGAGCGACGAGGAGGCCTTCAAGCAGTCCGTGGAGTCGATCACCGGCCCCATCTCCCGC
ACCATCTCGACCAAGGGCATGCTGTCCGTCTACAACTCGTTCAACGAGGCTGACAAGAAG
ATCTTCGAGCAGGCCTACTCTGCCTCGTACAAGCCCGCCCTGGACATCTGCTTTGAGATC
TACGAGGACGTGGCCAGCGGCAACGAGATCAAGTCGGTGGTGCAGGCCGTGCAGCGCTTC
GACCGCTTCCCCATGGGCAAGATCGACCAGACCTACATGTGGAAGGTCGGCCAGAAGGTG
CGCGCCGAGCGTGACGAGTCCAAGATCCCCGTCAACCCCTTCACCGCCGGTGTGTACGTC
GCCGTCATGATGGCCACCGTCGAGGTGCTGCGCGAGAAGGGCCACCCCTTCAGCGAGATC
TGCAACGAGTCCATCATTGAGGCCGTGGACTCGCTGAACCCCTACATGCACGCCCGCGGC
GTTGCCTTCATGGTGGACAACTGCTCCTACACCGCCCGCCTGGGCTCGCGCAAGTGGGCT
CCCCGTCTTCGACTACATCATCGAGCAGCAGGCGTTCGTGGACATTGACTCTGGCAAGGC
CGCCGACAAGGAGGTGATGGCCGAGTTCCTGGCCCACCCCGTGCACAGCGCCCTGGCCAC
CTGCTCCAGCATGCGCCCCTCGGTCGACATCTCCGTCGGTGGCGAGAACAGCTCCGTGGG
CGTCGGCGCCGGCGCTGCCCGCACGGAGTTCCGCTCCACCGCCGCCAAGGTGTAAGCAGC
CCAACCGCACTGGTCTGGGTGCAGCAGCAGCTGCTGCTGCAGCTGACCGCTGTGGGCGCG
CAGCCTCTCTGGGCGCTTGAAAGCGTGTCTGGAGCGCGCAGCCAGCGGCGGTTGCGGTGA
TGCTGGCGAGGCCTGGAACTGGAGGCGCACGCGCGAGAGCTAGCTGTGAAAGCAGAAGCC
CGCGTGGCAAGTGCTTGGGTGGGAGGGAGGCGTGGCGTGTCGCTGGCCCGAAGTGCTCGG
GGGCGTGCGCTGCGCCAGGAGGTTCGCGTGTAGTGACCGGGACAAGGAAAGAGCACGCAG
GAGGGAGCGCGCTTGACAGAAATGCAGCGGTGTTGTGAGCCGCCGTGATGTGATGAGGTG
GCTTGAGTGGGCATGGCGTGCGCTAAGCTGCTGCGAGTCGGCGTGCGATTTACACGCGCT
GTGGTGGTGCTTCACTGCCACGACTTTTGACTAGTGCACGGGGCAGGTTAGCGGGGCTGC
TCTGTTGCGAACTAAGTTGACTAGTGCACTCGCCGGACCCGGGTCTGTCCGTTTTGCAGC
CCGGCGTTGTATCAACTCACCCTTCCTCAAAAAAAAAAAAAAAAAACTCGAGactagttc
tctctctc


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000348A_C01 KCC000348A_c01
         (2288 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, chloroplast pr...   589  e-178
pdb|1YVE|I Chain I, Acetohydroxy Acid Isomeroreductase Complexed...   584  e-177
pir||S30145 ketol-acid reductoisomerase (EC 1.1.1.86) precursor ...   583  e-177
ref|NP_191420.1| ketol-acid reductoisomerase [Arabidopsis thalia...   583  e-177
emb|CAA48253.1| ketol-acid reductoisomerase [Arabidopsis thaliana]    581  e-176

>sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, chloroplast precursor (Acetohydroxy-acid
            reductoisomerase) (Alpha-keto-beta-hydroxylacil
            reductoisomerase) gi|81509|pir||S17180 ketol-acid
            reductoisomerase (EC 1.1.1.86) precursor - spinach
            gi|21234|emb|CAA40356.1| acetohydroxy acid
            reductoisomerase; ketol-acid reductoisomerase [Spinacia
            oleracea]
          Length = 595

 Score =  589 bits (1518), Expect(2) = e-178
 Identities = 305/480 (63%), Positives = 371/480 (76%), Gaps = 20/480 (4%)
 Frame = +1

Query: 67   KAVRVAPSGRR------SAVRVSA-------AVHLDFNTKVFQKEHAKFGPTEEYIVRGG 207
            KA RV PSG        SA  VSA       A   DF++ VF+KE       +EYIVRGG
Sbjct: 52   KAARVLPSGANGGGSALSAQMVSAPSINTPSATTFDFDSSVFKKEKVTLSGHDEYIVRGG 111

Query: 208  RDKYPLLKEAFKGIKKVSVIGWGSQAPAQAQNLRDSIAEAGMDIKVAIGLRPDSPSWAEA 387
            R+ +PLL +AFKGIK++ VIGWGSQAPAQAQNL+DS+ EA  D+ V IGLR  S S+AEA
Sbjct: 112  RNLFPLLPDAFKGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEA 171

Query: 388  EACGFSKTDGTLGEVFEQISSSDFVILLISDAAQAKLYPRILAAMKPGATLGLSHGFLLG 567
             A GFS+ +GTLG+++E IS SD V+LLISD+AQA  Y ++ + MKP + LGLSHGFLLG
Sbjct: 172  RAAGFSEENGTLGDMWETISGSDLVLLLISDSAQADNYEKVFSHMKPNSILGLSHGFLLG 231

Query: 568  VMRNDGVDFRKDINVVLVAPKGMGPSVRRLYEQGKSVNGAGINCSFAIQQDATGQAADIA 747
             +++ G DF K+I+V+ V PKGMGPSVRRLY QGK VNGAGIN SFA+ QD  G+A D+A
Sbjct: 232  HLQSLGQDFPKNISVIAVCPKGMGPSVRRLYVQGKEVNGAGINSSFAVHQDVDGRATDVA 291

Query: 748  IGWAIGVGAPFAFPTTLESEYKSDIYGERCVLLGAVHGIVEALFRRYTRQGMSDEEAFKQ 927
            +GW+I +G+PF F TTLE EYKSDI+GER +LLGAVHGIVE LFRRYT  GMS++ A+K 
Sbjct: 292  LGWSIALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVECLFRRYTESGMSEDLAYKN 351

Query: 928  SVESITGPISRTISTKGMLSVYNSFNEADKKIFEQAYSASYKPALDICFEIYEDVASGNE 1107
            +VE ITG IS+TISTKGML++YNS +E  KK F+ AYSASY P++DI +E YEDVASG+E
Sbjct: 352  TVECITGVISKTISTKGMLALYNSLSEEGKKDFQAAYSASYYPSMDILYECYEDVASGSE 411

Query: 1108 IKSVVQAVQRF------DRFPMGKIDQTYMWKVGQKVRAERDESKI-PVNPFTAGVYVAV 1266
            I+SVV A +RF        FPMGKIDQT MWKVG+KVR+ R    + P+ PFTAGVYVA+
Sbjct: 412  IRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGEKVRSVRPAGDLGPLYPFTAGVYVAL 471

Query: 1267 MMATVEVLREKGHPFSEICNESIIEAVDSLNPYMHARGVAFMVDNCSYTARLGSRKWAPR 1446
            MMA +E+LR+KGH +SEI NES+IEAVDSLNP+MHARGV+FMVDNCS TARLGSRKWAPR
Sbjct: 472  MMAQIEILRKKGHSYSEIINESVIEAVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPR 531

 Score = 62.4 bits (150), Expect(2) = e-178
 Identities = 26/52 (50%), Positives = 39/52 (75%)
 Frame = +2

Query: 1442 PVFDYIIEQQAFVDIDSGKAADKEVMAEFLAHPVHSALATCSSMRPSVDISV 1597
            P FDYI+ QQA V +D+G   ++++++ FL+ PVH A+  C+ +RPSVDISV
Sbjct: 530  PRFDYILSQQALVAVDNGAPINQDLISNFLSDPVHEAIGVCAQLRPSVDISV 581

>pdb|1YVE|I Chain I, Acetohydroxy Acid Isomeroreductase Complexed With Nadph,
            Magnesium And Inhibitor Ipoha (N-Hydroxy-N-
            Isopropyloxamate) gi|2554836|pdb|1YVE|J Chain J,
            Acetohydroxy Acid Isomeroreductase Complexed With Nadph,
            Magnesium And Inhibitor Ipoha (N-Hydroxy-N-
            Isopropyloxamate) gi|2554837|pdb|1YVE|K Chain K,
            Acetohydroxy Acid Isomeroreductase Complexed With Nadph,
            Magnesium And Inhibitor Ipoha (N-Hydroxy-N-
            Isopropyloxamate) gi|2554838|pdb|1YVE|L Chain L,
            Acetohydroxy Acid Isomeroreductase Complexed With Nadph,
            Magnesium And Inhibitor Ipoha (N-Hydroxy-N-
            Isopropyloxamate) gi|7546308|pdb|1QMG|A Chain A,
            Acetohydroxyacid Isomeroreductase Complexed With Its
            Reaction Product Dihydroxy-Methylvalerate, Manganese And
            Adp-Ribose. gi|7546309|pdb|1QMG|B Chain B,
            Acetohydroxyacid Isomeroreductase Complexed With Its
            Reaction Product Dihydroxy-Methylvalerate, Manganese And
            Adp-Ribose. gi|7546310|pdb|1QMG|C Chain C,
            Acetohydroxyacid Isomeroreductase Complexed With Its
            Reaction Product Dihydroxy-Methylvalerate, Manganese And
            Adp-Ribose. gi|7546311|pdb|1QMG|D Chain D,
            Acetohydroxyacid Isomeroreductase Complexed With Its
            Reaction Product Dihydroxy-Methylvalerate, Manganese And
            Adp-Ribose
          Length = 524

 Score =  584 bits (1505), Expect(2) = e-177
 Identities = 293/455 (64%), Positives = 362/455 (79%), Gaps = 7/455 (1%)
 Frame = +1

Query: 103  AVRVSAAVHLDFNTKVFQKEHAKFGPTEEYIVRGGRDKYPLLKEAFKGIKKVSVIGWGSQ 282
            ++   +A   DF++ VF+KE       +EYIVRGGR+ +PLL +AFKGIK++ VIGWGSQ
Sbjct: 6    SIDTPSATTFDFDSSVFKKEKVTLSGHDEYIVRGGRNLFPLLPDAFKGIKQIGVIGWGSQ 65

Query: 283  APAQAQNLRDSIAEAGMDIKVAIGLRPDSPSWAEAEACGFSKTDGTLGEVFEQISSSDFV 462
            APAQAQNL+DS+ EA  D+ V IGLR  S S+AEA A GFS+ +GTLG+++E IS SD V
Sbjct: 66   APAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLV 125

Query: 463  ILLISDAAQAKLYPRILAAMKPGATLGLSHGFLLGVMRNDGVDFRKDINVVLVAPKGMGP 642
            +LLISD+AQA  Y ++ + MKP + LGLSHGFLLG +++ G DF K+I+V+ V PKGMGP
Sbjct: 126  LLLISDSAQADNYEKVFSHMKPNSILGLSHGFLLGHLQSLGQDFPKNISVIAVCPKGMGP 185

Query: 643  SVRRLYEQGKSVNGAGINCSFAIQQDATGQAADIAIGWAIGVGAPFAFPTTLESEYKSDI 822
            SVRRLY QGK VNGAGIN SFA+ QD  G+A D+A+GW+I +G+PF F TTLE EYKSDI
Sbjct: 186  SVRRLYVQGKEVNGAGINSSFAVHQDVDGRATDVALGWSIALGSPFTFATTLEQEYKSDI 245

Query: 823  YGERCVLLGAVHGIVEALFRRYTRQGMSDEEAFKQSVESITGPISRTISTKGMLSVYNSF 1002
            +GER +LLGAVHGIVE LFRRYT  GMS++ A+K +VE ITG IS+TISTKGML++YNS 
Sbjct: 246  FGERGILLGAVHGIVECLFRRYTESGMSEDLAYKNTVECITGVISKTISTKGMLALYNSL 305

Query: 1003 NEADKKIFEQAYSASYKPALDICFEIYEDVASGNEIKSVVQAVQRF------DRFPMGKI 1164
            +E  KK F+ AYSASY P++DI +E YEDVASG+EI+SVV A +RF        FPMGKI
Sbjct: 306  SEEGKKDFQAAYSASYYPSMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKI 365

Query: 1165 DQTYMWKVGQKVRAERDESKI-PVNPFTAGVYVAVMMATVEVLREKGHPFSEICNESIIE 1341
            DQT MWKVG+KVR+ R    + P+ PFTAGVYVA+MMA +E+LR+KGH +SEI NES+IE
Sbjct: 366  DQTRMWKVGEKVRSVRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIE 425

Query: 1342 AVDSLNPYMHARGVAFMVDNCSYTARLGSRKWAPR 1446
            AVDSLNP+MHARGV+FMVDNCS TARLGSRKWAPR
Sbjct: 426  AVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPR 460

 Score = 62.4 bits (150), Expect(2) = e-177
 Identities = 26/52 (50%), Positives = 39/52 (75%)
 Frame = +2

Query: 1442 PVFDYIIEQQAFVDIDSGKAADKEVMAEFLAHPVHSALATCSSMRPSVDISV 1597
            P FDYI+ QQA V +D+G   ++++++ FL+ PVH A+  C+ +RPSVDISV
Sbjct: 459  PRFDYILSQQALVAVDNGAPINQDLISNFLSDPVHEAIGVCAQLRPSVDISV 510

>pir||S30145 ketol-acid reductoisomerase (EC 1.1.1.86) precursor - Arabidopsis
            thaliana
          Length = 591

 Score =  583 bits (1503), Expect(2) = e-177
 Identities = 298/484 (61%), Positives = 368/484 (75%), Gaps = 7/484 (1%)
 Frame = +1

Query: 16   LNSKSRVLSGSRQQAAAKAVRVAPSGRRSAVRVSAAVHLDFNTKVFQKEHAKFGPTEEYI 195
            L S +  ++G+    ++ A R+  S       V A V LDF T VF+KE       EEYI
Sbjct: 47   LRSLTATVAGNGATGSSLAARMVSSSA-----VKAPVSLDFETSVFKKEKVSLAGYEEYI 101

Query: 196  VRGGRDKYPLLKEAFKGIKKVSVIGWGSQAPAQAQNLRDSIAEAGMDIKVAIGLRPDSPS 375
            VRGGRD +  L +AFKGIK++ VIGWGSQ PAQAQNLRDS+ EA  DI V IGLR  S S
Sbjct: 102  VRGGRDLFKHLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLVEAKSDIVVKIGLRKGSRS 161

Query: 376  WAEAEACGFSKTDGTLGEVFEQISSSDFVILLISDAAQAKLYPRILAAMKPGATLGLSHG 555
            + EA A GF++  GTLG+++E I+ SD V+LLISDAAQA  Y +I + MKP + LGLSHG
Sbjct: 162  FEEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHG 221

Query: 556  FLLGVMRNDGVDFRKDINVVLVAPKGMGPSVRRLYEQGKSVNGAGINCSFAIQQDATGQA 735
            FLLG +++ G+DF K+I+VV V PKGMGPSVRRLY QGK +NGAGIN SFA+ QD  G+A
Sbjct: 222  FLLGHLQSSGLDFPKNISVVAVCPKGMGPSVRRLYVQGKEINGAGINASFAVHQDVDGRA 281

Query: 736  ADIAIGWAIGVGAPFAFPTTLESEYKSDIYGERCVLLGAVHGIVEALFRRYTRQGMSDEE 915
            AD+A+GW++ +G+PF F TTLE EY+SDI+GER +LLGAVHGIVE+LFRRYT  GMS++ 
Sbjct: 282  ADVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRYTENGMSEDL 341

Query: 916  AFKQSVESITGPISRTISTKGMLSVYNSFNEADKKIFEQAYSASYKPALDICFEIYEDVA 1095
            A+K +VE ITG ISRTIST+GML+VYNS +E  KK FE AYSAS+ P ++I +E YEDV 
Sbjct: 342  AYKNTVECITGTISRTISTQGMLAVYNSLSEEGKKDFETAYSASFYPCMEILYECYEDVQ 401

Query: 1096 SGNEIKSVVQAVQRF------DRFPMGKIDQTYMWKVGQKVRAERDESKI-PVNPFTAGV 1254
            SG+EI+SVV A +RF        FPMG IDQT MWKVG++VR  R    + P+ PFTAGV
Sbjct: 402  SGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGERVRKSRPAGDLGPLYPFTAGV 461

Query: 1255 YVAVMMATVEVLREKGHPFSEICNESIIEAVDSLNPYMHARGVAFMVDNCSYTARLGSRK 1434
            YVA+MMA +E+LR+KGH +SEI NES+IE+VDSLNP+MHARGV+FMVDNCS TARLGSRK
Sbjct: 462  YVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRK 521

Query: 1435 WAPR 1446
            WAPR
Sbjct: 522  WAPR 525

 Score = 62.4 bits (150), Expect(2) = e-177
 Identities = 26/52 (50%), Positives = 39/52 (75%)
 Frame = +2

Query: 1442 PVFDYIIEQQAFVDIDSGKAADKEVMAEFLAHPVHSALATCSSMRPSVDISV 1597
            P FDYI+ QQA V +DSG A ++++++ F + PVH A+  C+ +RP+VDISV
Sbjct: 524  PRFDYILTQQALVAVDSGAAINRDLISNFFSDPVHGAIEVCAQLRPTVDISV 575

>ref|NP_191420.1| ketol-acid reductoisomerase [Arabidopsis thaliana]
            gi|12644387|sp|Q05758|ILV5_ARATH Ketol-acid
            reductoisomerase, chloroplast precursor
            (Acetohydroxy-acid reductoisomerase)
            (Alpha-keto-beta-hydroxylacil reductoisomerase)
            gi|11251579|pir||T45681 ketol-acid reductoisomerase -
            Arabidopsis thaliana gi|402552|emb|CAA49506.1| ketol-acid
            reductoisomerase [Arabidopsis thaliana]
            gi|6735378|emb|CAB68199.1| ketol-acid reductoisomerase
            [Arabidopsis thaliana]
            gi|11692838|gb|AAG40022.1|AF324671_1 AT3g58610
            [Arabidopsis thaliana]
            gi|11993867|gb|AAG42917.1|AF329500_1 putative ketol-acid
            reductoisomerase [Arabidopsis thaliana]
            gi|17063195|gb|AAL32973.1| AT3g58610/F14P22_200
            [Arabidopsis thaliana] gi|17529224|gb|AAL38839.1|
            putative ketol-acid reductoisomerase [Arabidopsis
            thaliana] gi|20465493|gb|AAM20206.1| putative ketol-acid
            reductoisomerase [Arabidopsis thaliana]
            gi|23397061|gb|AAN31816.1| putative ketol-acid
            reductoisomerase [Arabidopsis thaliana]
            gi|23463055|gb|AAN33197.1| At3g58610/F14P22_200
            [Arabidopsis thaliana]
          Length = 591

 Score =  583 bits (1503), Expect(2) = e-177
 Identities = 298/484 (61%), Positives = 368/484 (75%), Gaps = 7/484 (1%)
 Frame = +1

Query: 16   LNSKSRVLSGSRQQAAAKAVRVAPSGRRSAVRVSAAVHLDFNTKVFQKEHAKFGPTEEYI 195
            L S +  ++G+    ++ A R+  S       V A V LDF T VF+KE       EEYI
Sbjct: 47   LRSLTATVAGNGATGSSLAARMVSSSA-----VKAPVSLDFETSVFKKEKVSLAGYEEYI 101

Query: 196  VRGGRDKYPLLKEAFKGIKKVSVIGWGSQAPAQAQNLRDSIAEAGMDIKVAIGLRPDSPS 375
            VRGGRD +  L +AFKGIK++ VIGWGSQ PAQAQNLRDS+ EA  DI V IGLR  S S
Sbjct: 102  VRGGRDLFKHLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLVEAKSDIVVKIGLRKGSRS 161

Query: 376  WAEAEACGFSKTDGTLGEVFEQISSSDFVILLISDAAQAKLYPRILAAMKPGATLGLSHG 555
            + EA A GF++  GTLG+++E I+ SD V+LLISDAAQA  Y +I + MKP + LGLSHG
Sbjct: 162  FEEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHG 221

Query: 556  FLLGVMRNDGVDFRKDINVVLVAPKGMGPSVRRLYEQGKSVNGAGINCSFAIQQDATGQA 735
            FLLG +++ G+DF K+I+VV V PKGMGPSVRRLY QGK +NGAGIN SFA+ QD  G+A
Sbjct: 222  FLLGHLQSSGLDFPKNISVVAVCPKGMGPSVRRLYVQGKEINGAGINASFAVHQDVDGRA 281

Query: 736  ADIAIGWAIGVGAPFAFPTTLESEYKSDIYGERCVLLGAVHGIVEALFRRYTRQGMSDEE 915
            AD+A+GW++ +G+PF F TTLE EY+SDI+GER +LLGAVHGIVE+LFRRYT  GMS++ 
Sbjct: 282  ADVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRYTENGMSEDL 341

Query: 916  AFKQSVESITGPISRTISTKGMLSVYNSFNEADKKIFEQAYSASYKPALDICFEIYEDVA 1095
            A+K +VE ITG ISRTIST+GML+VYNS +E  KK FE AYSAS+ P ++I +E YEDV 
Sbjct: 342  AYKNTVECITGTISRTISTQGMLAVYNSLSEEGKKDFETAYSASFYPCMEILYECYEDVQ 401

Query: 1096 SGNEIKSVVQAVQRF------DRFPMGKIDQTYMWKVGQKVRAERDESKI-PVNPFTAGV 1254
            SG+EI+SVV A +RF        FPMG IDQT MWKVG++VR  R    + P+ PFTAGV
Sbjct: 402  SGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGERVRKSRPAGDLGPLYPFTAGV 461

Query: 1255 YVAVMMATVEVLREKGHPFSEICNESIIEAVDSLNPYMHARGVAFMVDNCSYTARLGSRK 1434
            YVA+MMA +E+LR+KGH +SEI NES+IE+VDSLNP+MHARGV+FMVDNCS TARLGSRK
Sbjct: 462  YVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRK 521

Query: 1435 WAPR 1446
            WAPR
Sbjct: 522  WAPR 525

 Score = 62.4 bits (150), Expect(2) = e-177
 Identities = 26/52 (50%), Positives = 39/52 (75%)
 Frame = +2

Query: 1442 PVFDYIIEQQAFVDIDSGKAADKEVMAEFLAHPVHSALATCSSMRPSVDISV 1597
            P FDYI+ QQA V +DSG A ++++++ F + PVH A+  C+ +RP+VDISV
Sbjct: 524  PRFDYILTQQALVAVDSGAAINRDLISNFFSDPVHGAIEVCAQLRPTVDISV 575

>emb|CAA48253.1| ketol-acid reductoisomerase [Arabidopsis thaliana]
          Length = 591

 Score =  581 bits (1498), Expect(2) = e-176
 Identities = 297/484 (61%), Positives = 367/484 (75%), Gaps = 7/484 (1%)
 Frame = +1

Query: 16   LNSKSRVLSGSRQQAAAKAVRVAPSGRRSAVRVSAAVHLDFNTKVFQKEHAKFGPTEEYI 195
            L S +  ++G+    ++ A R+  S       V A V LDF T VF+KE       EEYI
Sbjct: 47   LRSLTATVAGNGATGSSLAARMVSSSA-----VKAPVSLDFETSVFKKEKVSLAGYEEYI 101

Query: 196  VRGGRDKYPLLKEAFKGIKKVSVIGWGSQAPAQAQNLRDSIAEAGMDIKVAIGLRPDSPS 375
            VRGGRD +  L +AFKGIK++ VIGWGSQ PAQAQNLRDS+ EA  DI V IGLR  S S
Sbjct: 102  VRGGRDLFKHLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLVEAKSDIVVKIGLRKGSRS 161

Query: 376  WAEAEACGFSKTDGTLGEVFEQISSSDFVILLISDAAQAKLYPRILAAMKPGATLGLSHG 555
            + EA A GF++  GTLG+++E I+ SD V+LLISDAAQA  Y +I + MKP + LGLSHG
Sbjct: 162  FEEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHG 221

Query: 556  FLLGVMRNDGVDFRKDINVVLVAPKGMGPSVRRLYEQGKSVNGAGINCSFAIQQDATGQA 735
            FLLG +++ G+DF K+I+VV V PKGMGPSVRRLY QGK +NGAGIN SFA+ QD  G+A
Sbjct: 222  FLLGHLQSSGLDFPKNISVVAVCPKGMGPSVRRLYVQGKEINGAGINASFAVHQDVDGRA 281

Query: 736  ADIAIGWAIGVGAPFAFPTTLESEYKSDIYGERCVLLGAVHGIVEALFRRYTRQGMSDEE 915
            AD+ +GW++ +G+PF F TTLE EY+SDI+GER +LLGAVHGIVE+LFRRYT  GMS++ 
Sbjct: 282  ADVRLGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRYTENGMSEDL 341

Query: 916  AFKQSVESITGPISRTISTKGMLSVYNSFNEADKKIFEQAYSASYKPALDICFEIYEDVA 1095
            A+K +VE ITG ISRTIST+GML+VYNS +E  KK FE AYSAS+ P ++I +E YEDV 
Sbjct: 342  AYKNTVECITGTISRTISTQGMLAVYNSLSEEGKKDFETAYSASFYPCMEILYECYEDVQ 401

Query: 1096 SGNEIKSVVQAVQRF------DRFPMGKIDQTYMWKVGQKVRAERDESKI-PVNPFTAGV 1254
            SG+EI+SVV A +RF        FPMG IDQT MWKVG++VR  R    + P+ PFTAGV
Sbjct: 402  SGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGERVRKSRPAGDLGPLYPFTAGV 461

Query: 1255 YVAVMMATVEVLREKGHPFSEICNESIIEAVDSLNPYMHARGVAFMVDNCSYTARLGSRK 1434
            YVA+MMA +E+LR+KGH +SEI NES+IE+VDSLNP+MHARGV+FMVDNCS TARLGSRK
Sbjct: 462  YVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRK 521

Query: 1435 WAPR 1446
            WAPR
Sbjct: 522  WAPR 525

 Score = 62.4 bits (150), Expect(2) = e-176
 Identities = 26/52 (50%), Positives = 39/52 (75%)
 Frame = +2

Query: 1442 PVFDYIIEQQAFVDIDSGKAADKEVMAEFLAHPVHSALATCSSMRPSVDISV 1597
            P FDYI+ QQA V +DSG A ++++++ F + PVH A+  C+ +RP+VDISV
Sbjct: 524  PRFDYILTQQALVAVDSGAAINRDLISNFFSDPVHGAIEVCAQLRPTVDISV 575



EST assemble image


clone accession position
1 LCL030f01_r AV627690 1 310
2 HCL048g12_r AV642275 1 472
3 CL77d05_r AV397281 1 544
4 MXL027f02_r BP094694 2 202
5 MXL027e02_r BP094688 2 207
6 MXL023f07_r BP094475 2 197
7 CM047d11_r AV388561 2 372
8 HCL078e07_r AV643926 2 500
9 CL76f06_r AV397126 2 576
10 MXL011f05_r BP093661 2 547
11 HC039g07_r AV634929 2 541
12 CL69e04_r AV396806 2 541
13 HC085h06_r AV638399 3 411
14 LCL098f02_r AV631713 3 387
15 LCL060h02_r AV629553 6 473
16 MXL086e10_r BP098076 8 442
17 MXL065e06_r BP096827 10 499
18 CM003f01_r AV386555 15 540
19 HCL026f12_r AV641043 27 565
20 MXL044d01_r BP095595 41 440
21 LCL080a06_r AV630515 85 510
22 CL21c02_r AV394356 94 589
23 HCL039h07_r AV641764 99 593
24 HCL017g05_r AV640521 238 746
25 MXL009b03_r BP093490 274 699
26 LCL015c01_r AV626772 464 912
27 MXL079f10_r BP097687 492 927
28 LCL006h01_r AV626319 699 1206
29 HC033a01_r AV634405 775 1267
30 LC067e08_r AV623705 790 1312
31 CM071b05_r AV391355 831 1422
32 LC019f08_r AV620255 920 1424
33 MX236g04_r BP091308 928 1315
34 HCL002h07_r AV639676 931 1472
35 LC004a03_r AV619114 934 1382
36 HC013f03_r AV632860 961 1462
37 CM033g01_r AV388403 968 1491
38 MX236c06_r BP091272 968 1400
39 LC040e07_r AV621755 996 1486
40 HC019e11_r AV633331 1063 1561
41 CM087d03_r AV392452 1079 1587
42 CL52b10_r AV395873 1124 1769
43 CM076f11_r AV391669 1128 1695
44 CM011c12_r AV386916 1136 1663
45 LC054b06_r AV622760 1176 1629
46 LC041f07_r AV621845 1192 1664
47 LC061g12_r AV623303 1203 1707
48 CM029d10_r AV389341 1206 1743
49 CM087d10_r AV392426 1415 1997
50 LC019b08_r AV620217 1426 1890
51 HCL006g10_r AV639894 1503 1893
52 MX237f06_r BP091362 1553 1881
53 CL29c10_r AV394673 1649 1978
54 CM067d06_r AV390934 1678 2294
55 LC033e10_r AV621260 1763 2310
56 MX256d02_r BP092588 1770 2270




Chlamydomonas reinhardtii
Kazusa DNA Research Institute