KCC000337A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000337A_C01 KCC000337A_c01
gccgcacacaaatcaaTATGTCTCAAACGGGTGACAAGCCACCGACAGGTTCTCAAGCAG
GGTCGCAAGGCAGCTCTTCAAGCAATATCCCGGTGCCGCAAGAATGCGATATCCCGGGCA
AAGCGCGCTTTAGCCTCTGGAGAACTACGTTTGAGATAGACACTAGATATGTGCCAATTA
AGGCGATCGGAAAGGGAGCTTACGGTGTCGTGGCGTCCGCAAAAGACAGTGTAACCGGGG
AAAAGGTGGCTATCAAAAAGATTGGGAATGCATTCGAGAACCTGACCGATGCTCGGCGGA
CTTTGCGTGAGATCAAGCTCCTCCGGCACTTGAAACACGACAACATCATCGCCGTGAAGG
ACATCCTCAAGCCGCCGGCCAAGGACAAGTTCAATGACGTGTACCTGGTGTACGAGCTGA
TGGACACGGACCTGCACCAGATCATCCGCTCCTCGCAGCCACTCACAAACGAACACTTTC
AGTACTTCGTCTACCAGGTGCTCCGCGGGCTCAAGTACGTGCACACGGCCAACGTGCTGC
ACCGCGACCTCAAACCCAGCAACCTGCTGCTGAACGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000337A_C01 KCC000337A_c01
         (578 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q40884|MAPK_PETHY Mitogen-activated protein kinase homolog 1 ...   229  2e-59
sp|Q40517|NTF3_TOBAC Mitogen-activated protein kinase homolog NT...   229  3e-59
pir||S40470 mitogen-activated protein kinase 4 (EC 2.7.1.-) - Ar...   228  6e-59
ref|NP_192046.1| mitogen-activated protein kinase (MAPK), putati...   228  6e-59
gb|AAF73257.1|AF154329_1 MAP kinase PsMAPK2 [Pisum sativum]           227  1e-58

>sp|Q40884|MAPK_PETHY Mitogen-activated protein kinase homolog 1 (PMEK1)
           gi|1076650|pir||S52989 mitogen-activated,
           extracelluar-regulated protein kinase 1  (EC 2.7.1.-) -
           garden petunia gi|603871|emb|CAA58466.1| MAP/ERK kinase
           1 [Petunia x hybrida]
          Length = 384

 Score =  229 bits (584), Expect = 2e-59
 Identities = 107/161 (66%), Positives = 134/161 (82%)
 Frame = +3

Query: 96  PQECDIPGKARFSLWRTTFEIDTRYVPIKAIGKGAYGVVASAKDSVTGEKVAIKKIGNAF 275
           P     PGK  +S+W++ FEIDT+YVPIK IG+GAYG+V S+ +  T EKVAIKKI NAF
Sbjct: 8   PNGIRTPGKHYYSMWQSLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAF 67

Query: 276 ENLTDARRTLREIKLLRHLKHDNIIAVKDILKPPAKDKFNDVYLVYELMDTDLHQIIRSS 455
           EN  DA RTLRE+KLLRHL+H+N+IA+KD++ P  +  F DVYLVYELMDTDLHQII+SS
Sbjct: 68  ENRIDALRTLRELKLLRHLRHENVIALKDVMMPIQRRSFKDVYLVYELMDTDLHQIIKSS 127

Query: 456 QPLTNEHFQYFVYQVLRGLKYVHTANVLHRDLKPSNLLLNA 578
           Q L+N+H QYF++Q+LRGLKY+H+AN+LHRDLKP NLL+NA
Sbjct: 128 QTLSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINA 168

>sp|Q40517|NTF3_TOBAC Mitogen-activated protein kinase homolog NTF3 (P43)
           gi|481830|pir||S39559 mitogen-activated protein kinase 3
           homolog ntf3 - common tobacco gi|406751|emb|CAA49592.1|
           NTF3 [Nicotiana tabacum]
          Length = 372

 Score =  229 bits (583), Expect = 3e-59
 Identities = 107/161 (66%), Positives = 134/161 (82%)
 Frame = +3

Query: 96  PQECDIPGKARFSLWRTTFEIDTRYVPIKAIGKGAYGVVASAKDSVTGEKVAIKKIGNAF 275
           P     PGK  +S+W++ FEIDT+YVPIK IG+GAYG+V S+ +  T EKVAIKKI NAF
Sbjct: 8   PNGIRTPGKHYYSMWQSLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAF 67

Query: 276 ENLTDARRTLREIKLLRHLKHDNIIAVKDILKPPAKDKFNDVYLVYELMDTDLHQIIRSS 455
           EN  DA RTLRE+KLLRHL+H+N+IA+KD++ P  +  F DVYLVYELMDTDLHQII+SS
Sbjct: 68  ENRIDALRTLRELKLLRHLRHENVIALKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSS 127

Query: 456 QPLTNEHFQYFVYQVLRGLKYVHTANVLHRDLKPSNLLLNA 578
           Q L+N+H QYF++Q+LRGLKY+H+AN+LHRDLKP NLL+NA
Sbjct: 128 QTLSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINA 168

>pir||S40470 mitogen-activated protein kinase 4 (EC 2.7.1.-) - Arabidopsis
           thaliana gi|457400|dbj|BAA04867.1| MAP kinase
           [Arabidopsis thaliana]
          Length = 376

 Score =  228 bits (580), Expect = 6e-59
 Identities = 110/174 (63%), Positives = 144/174 (82%), Gaps = 1/174 (0%)
 Frame = +3

Query: 60  GSQGSSSSNIPVPQECDIPGKARFSLWRTTFEIDTRYVP-IKAIGKGAYGVVASAKDSVT 236
           GS G  SS+  V          +++++   FE+  +YVP ++ IG+GAYG+V +A +S T
Sbjct: 8   GSSGDQSSSKGVATHGG--SYVQYNVYGNLFEVSRKYVPPLRPIGRGAYGIVCAATNSET 65

Query: 237 GEKVAIKKIGNAFENLTDARRTLREIKLLRHLKHDNIIAVKDILKPPAKDKFNDVYLVYE 416
           GE+VAIKKIGNAF+N+ DA+RTLREIKLL+H+ H+N+IAVKDI+KPP ++ FNDVY+VYE
Sbjct: 66  GEEVAIKKIGNAFDNIIDAKRTLREIKLLKHMDHENVIAVKDIIKPPQRENFNDVYIVYE 125

Query: 417 LMDTDLHQIIRSSQPLTNEHFQYFVYQVLRGLKYVHTANVLHRDLKPSNLLLNA 578
           LMDTDLHQIIRS+QPLT++H ++F+YQ+LRGLKYVH+ANVLHRDLKPSNLLLNA
Sbjct: 126 LMDTDLHQIIRSNQPLTDDHCRFFLYQLLRGLKYVHSANVLHRDLKPSNLLLNA 179

>ref|NP_192046.1| mitogen-activated protein kinase (MAPK), putative (MPK4)
           [Arabidopsis thaliana] gi|21431795|sp|Q39024|MPK4_ARATH
           Mitogen-activated protein kinase homolog 4 (MAP kinase
           4) (AtMPK4) gi|7267634|emb|CAB80946.1| MAP kinase 4
           [Arabidopsis thaliana]
           gi|13430638|gb|AAK25941.1|AF360231_1 putative MAP kinase
           4 (MPK4) [Arabidopsis thaliana]
           gi|14532814|gb|AAK64089.1| putative MAP kinase 4
           [Arabidopsis thaliana] gi|21595073|gb|AAM66070.1| MAP
           kinase MPK4 [Arabidopsis thaliana]
          Length = 376

 Score =  228 bits (580), Expect = 6e-59
 Identities = 110/174 (63%), Positives = 144/174 (82%), Gaps = 1/174 (0%)
 Frame = +3

Query: 60  GSQGSSSSNIPVPQECDIPGKARFSLWRTTFEIDTRYVP-IKAIGKGAYGVVASAKDSVT 236
           GS G  SS+  V          +++++   FE+  +YVP ++ IG+GAYG+V +A +S T
Sbjct: 8   GSSGDQSSSKGVATHGG--SYVQYNVYGNLFEVSRKYVPPLRPIGRGAYGIVCAATNSET 65

Query: 237 GEKVAIKKIGNAFENLTDARRTLREIKLLRHLKHDNIIAVKDILKPPAKDKFNDVYLVYE 416
           GE+VAIKKIGNAF+N+ DA+RTLREIKLL+H+ H+N+IAVKDI+KPP ++ FNDVY+VYE
Sbjct: 66  GEEVAIKKIGNAFDNIIDAKRTLREIKLLKHMDHENVIAVKDIIKPPQRENFNDVYIVYE 125

Query: 417 LMDTDLHQIIRSSQPLTNEHFQYFVYQVLRGLKYVHTANVLHRDLKPSNLLLNA 578
           LMDTDLHQIIRS+QPLT++H ++F+YQ+LRGLKYVH+ANVLHRDLKPSNLLLNA
Sbjct: 126 LMDTDLHQIIRSNQPLTDDHCRFFLYQLLRGLKYVHSANVLHRDLKPSNLLLNA 179

>gb|AAF73257.1|AF154329_1 MAP kinase PsMAPK2 [Pisum sativum]
          Length = 372

 Score =  227 bits (578), Expect = 1e-58
 Identities = 107/154 (69%), Positives = 131/154 (84%)
 Frame = +3

Query: 117 GKARFSLWRTTFEIDTRYVPIKAIGKGAYGVVASAKDSVTGEKVAIKKIGNAFENLTDAR 296
           GK  +S+W+T FEIDT+YVPIK IG+GAYG+V S+ +  T EKVAIKKI NAFEN  DA 
Sbjct: 15  GKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDAL 74

Query: 297 RTLREIKLLRHLKHDNIIAVKDILKPPAKDKFNDVYLVYELMDTDLHQIIRSSQPLTNEH 476
           RTLRE+KLLRHL H+N+IA+KDI+ P  +  F DVYLVYELMDTDLHQII+SSQ L+N+H
Sbjct: 75  RTLRELKLLRHLHHENVIALKDIMMPVHRTSFKDVYLVYELMDTDLHQIIKSSQTLSNDH 134

Query: 477 FQYFVYQVLRGLKYVHTANVLHRDLKPSNLLLNA 578
            QYF++Q+LRGLKY+H+AN+LHRDLKP NLL+NA
Sbjct: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLINA 168



EST assemble image


clone accession position
1 LCL032a07_r AV627786 1 440
2 CM034a10_r AV388655 17 578
3 CL20c07_r AV394285 22 475




Chlamydomonas reinhardtii
Kazusa DNA Research Institute