Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000331A_C01 KCC000331A_c01
(578 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ82688.1| Epa4p [Candida glabrata] 44 0.002
gb|AAQ82687.1| Epa5p [Candida glabrata] 43 0.004
emb|CAC87274.1| LppS protein [Mycoplasma conjunctivae] 43 0.004
ref|XP_220207.2| similar to splicing coactivator subunit SRm300;... 43 0.004
ref|NP_780438.1| RIKEN cDNA 5033413A03 [Mus musculus] gi|2635495... 42 0.005
>gb|AAQ82688.1| Epa4p [Candida glabrata]
Length = 1416
Score = 43.9 bits (102), Expect = 0.002
Identities = 28/90 (31%), Positives = 47/90 (52%)
Frame = +2
Query: 101 HPIEVGCHPFSKPNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGP 280
+PI C P P+ I S+S+ PSP + S +++S +S++ ++S
Sbjct: 313 NPIRDVCEPLPTPSQDINS--SSSSSPSPSSSSSSSSSSSSSSSS----SSSSSSSSSSS 366
Query: 281 SSSGQGLSTSSSTSSTSSGPGASKRAPAPA 370
SSS S S S+SS+SS +S +P+P+
Sbjct: 367 SSSSSSSSPSPSSSSSSSSSSSSSSSPSPS 396
Score = 38.9 bits (89), Expect = 0.052
Identities = 24/84 (28%), Positives = 44/84 (51%)
Frame = +2
Query: 164 SASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTSSSTSSTSSGPG 343
S+S+ PSP + S +++S +S++ ++S SSS S+SSS+SS+SS
Sbjct: 388 SSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSS 447
Query: 344 ASKRAPAPALPRWAQVKPADSLES 415
+S + + + + P+ S S
Sbjct: 448 SSSSSSSSSSSSSSSSSPSPSSSS 471
Score = 38.5 bits (88), Expect = 0.068
Identities = 23/69 (33%), Positives = 41/69 (59%)
Frame = +2
Query: 164 SASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTSSSTSSTSSGPG 343
S+S+ PSP + S +++S +S++ ++S SSS S+SSS+SS+SS
Sbjct: 370 SSSSSPSPSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSS----SSSSSSSSSSSSSS 425
Query: 344 ASKRAPAPA 370
+S +P+P+
Sbjct: 426 SSSSSPSPS 434
Score = 37.4 bits (85), Expect = 0.15
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = +2
Query: 164 SASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTSSSTSSTSSGPG 343
S+S+ SP + S +++S +S++ ++S SSS S+SSS+SS+SS
Sbjct: 368 SSSSSSSPSPSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 427
Query: 344 ASKRAPA 364
+S +P+
Sbjct: 428 SSSPSPS 434
Score = 35.4 bits (80), Expect = 0.58
Identities = 25/74 (33%), Positives = 40/74 (53%), Gaps = 3/74 (4%)
Frame = +2
Query: 164 SASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASG---PSSSGQGLSTSSSTSSTSS 334
S+S+ PSP + S +++S +S++ ++S PSSS S+SSS+SS S
Sbjct: 426 SSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSS-SSSSSSSSPSI 484
Query: 335 GPGASKRAPAPALP 376
P + P+PA P
Sbjct: 485 QPSSKPVDPSPADP 498
Score = 35.0 bits (79), Expect = 0.75
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +2
Query: 164 SASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTSSSTSSTSSGPG 343
S+S+ S + S +++S +S++ + S SSS S+SSS+SS+SS
Sbjct: 398 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSS 457
Query: 344 ASKRAPAPALPRWAQVKPADSLESP 418
+S + +P+ + + S SP
Sbjct: 458 SSSSSSSPSPSSSSSSSSSSSSSSP 482
Score = 35.0 bits (79), Expect = 0.75
Identities = 21/71 (29%), Positives = 38/71 (52%)
Frame = +2
Query: 137 PNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTSSS 316
P+ + + S+S+ SP + S +++S +S++ ++S SSS S SSS
Sbjct: 377 PSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSS 436
Query: 317 TSSTSSGPGAS 349
+SS+SS +S
Sbjct: 437 SSSSSSSSSSS 447
Score = 34.3 bits (77), Expect = 1.3
Identities = 21/78 (26%), Positives = 40/78 (50%)
Frame = +2
Query: 131 SKPNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTS 310
S P+ + + S+S+ S + S +++S + + ++S SSS S+S
Sbjct: 391 SSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSS 450
Query: 311 SSTSSTSSGPGASKRAPA 364
SS+SS+SS +S +P+
Sbjct: 451 SSSSSSSSSSSSSSPSPS 468
Score = 33.9 bits (76), Expect = 1.7
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 125 PFSKPNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLS 304
P S + + + S+S+ S + S +++S +S++ ++S SSS S
Sbjct: 395 PSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSS 454
Query: 305 TSSSTSSTSS-GPGASKRAPAPALPRWAQVKPADSLESP 418
+SSS+SS+SS P +S + + + ++P+ P
Sbjct: 455 SSSSSSSSSSPSPSSSSSSSSSSSSSSPSIQPSSKPVDP 493
>gb|AAQ82687.1| Epa5p [Candida glabrata]
Length = 1218
Score = 42.7 bits (99), Expect = 0.004
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = +2
Query: 101 HPIEVGCHPFSKPNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGP 280
+PI C P P+ I S+S PS + S +++S +S++ ++S
Sbjct: 313 NPIRDVCEPLPTPSQDINSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 372
Query: 281 SSSGQGLSTSSSTSSTSSGPGASKRAPAPA 370
SS S+SSS+SS+SS +S +P+P+
Sbjct: 373 SSPSPSSSSSSSSSSSSS---SSSSSPSPS 399
Score = 40.0 bits (92), Expect = 0.023
Identities = 23/69 (33%), Positives = 41/69 (59%)
Frame = +2
Query: 164 SASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTSSSTSSTSSGPG 343
S+S+ PSP + S +++S +S++ ++S PS S S+SSS+SS+SS
Sbjct: 429 SSSSSPSPSRSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSS---SSSSSSSSSSSSSS 485
Query: 344 ASKRAPAPA 370
+S +P+P+
Sbjct: 486 SSSSSPSPS 494
Score = 38.5 bits (88), Expect = 0.068
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +2
Query: 164 SASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTSSSTSSTSSGPG 343
S+S+ PSP + S +++S S++ ++S SSS S+SSS+SS+SS
Sbjct: 370 SSSSSPSPSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-S 428
Query: 344 ASKRAPAPA 370
+S +P+P+
Sbjct: 429 SSSSSPSPS 437
Score = 36.2 bits (82), Expect = 0.34
Identities = 21/62 (33%), Positives = 35/62 (55%)
Frame = +2
Query: 164 SASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTSSSTSSTSSGPG 343
S+S+ PSP + S +++S +S++ ++S SSS S SSS+SS+SS
Sbjct: 391 SSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSRSSSSSSSSSSSS 450
Query: 344 AS 349
+S
Sbjct: 451 SS 452
Score = 33.9 bits (76), Expect = 1.7
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +2
Query: 125 PFSKPNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLS 304
P S + + + S+S+ S + S +++S +S++ ++S SSS S
Sbjct: 398 PSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSRSSSSSSSSSSSSSSSSSSS 457
Query: 305 TSSSTSSTSSGPGAS 349
+SSS+SS+S P +S
Sbjct: 458 SSSSSSSSSPSPSSS 472
Score = 33.5 bits (75), Expect = 2.2
Identities = 22/85 (25%), Positives = 41/85 (47%)
Frame = +2
Query: 164 SASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTSSSTSSTSSGPG 343
S+S+ S + S +++S + ++ ++S SSS S+SSS+SS+SS P
Sbjct: 409 SSSSSSSSSSSSSSSSSSSSSSSSSPSPSRSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 468
Query: 344 ASKRAPAPALPRWAQVKPADSLESP 418
S + + + + + S SP
Sbjct: 469 PSSSSSSSSSSSSSSSSSSSSSPSP 493
Score = 32.0 bits (71), Expect = 6.4
Identities = 22/80 (27%), Positives = 42/80 (52%)
Frame = +2
Query: 131 SKPNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTS 310
S P+ + + S+S+ S + S +++S + + ++S SSS S+S
Sbjct: 394 SSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSRSSSSSSSSSSSSSSS 453
Query: 311 SSTSSTSSGPGASKRAPAPA 370
SS+SS+SS +S +P+P+
Sbjct: 454 SSSSSSSS---SSSSSPSPS 470
Score = 32.0 bits (71), Expect = 6.4
Identities = 22/85 (25%), Positives = 38/85 (43%)
Frame = +2
Query: 164 SASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTSSSTSSTSSGPG 343
S+S+ S + S +++S +S++ ++S SSS S S S+SS+SS
Sbjct: 444 SSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSS 503
Query: 344 ASKRAPAPALPRWAQVKPADSLESP 418
+S + PAD +P
Sbjct: 504 SSSSPSIQPSSKPVDPSPADPSNNP 528
>emb|CAC87274.1| LppS protein [Mycoplasma conjunctivae]
Length = 1405
Score = 42.7 bits (99), Expect = 0.004
Identities = 26/82 (31%), Positives = 42/82 (50%)
Frame = +2
Query: 131 SKPNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTS 310
S P+ + S + +P GG+ S +A S +S++ ++S SSS S+S
Sbjct: 1273 STPSFNVGSGGSTTTQPGQGSGGGGSSSSSAGSSSSAGSSSSSSSSSSSSSSSSSSSSSS 1332
Query: 311 SSTSSTSSGPGASKRAPAPALP 376
SS+SS+ + + APAPA P
Sbjct: 1333 SSSSSSPTPGATTPSAPAPATP 1354
Score = 36.2 bits (82), Expect = 0.34
Identities = 27/85 (31%), Positives = 42/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 170 SNRPSPHVQFGGARSE--AAASGRRVQVASAAVDNASGPSSSGQGLSTSSSTSSTSSGPG 343
S+ PS +V GG+ + SG +S+A ++S SSS S+SSS+SS+SS
Sbjct: 1272 SSTPSFNVGSGGSTTTQPGQGSGGGGSSSSSAGSSSSAGSSSSSSSSSSSSSSSSSSSSS 1331
Query: 344 ASKRAPAPALPRWAQVKPADSLESP 418
+S + +P PA + P
Sbjct: 1332 SSSSSSSPTPGATTPSAPAPATPGP 1356
>ref|XP_220207.2| similar to splicing coactivator subunit SRm300; RNA binding protein;
AT-rich element binding factor [Rattus norvegicus]
Length = 1971
Score = 42.7 bits (99), Expect = 0.004
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Frame = +2
Query: 131 SKPNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTS 310
++P +A+ ++ S + P V+ G + A +R +S++ ++S SSS S+S
Sbjct: 1782 AQPEVALKRVPSPTPVPKEAVREGRPQEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSS 1841
Query: 311 SST---SSTSSGPGASKRAPAPALP-RWAQVKPADSLESP 418
SS+ SS+SS +S +P+PA P A KPA + P
Sbjct: 1842 SSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPP 1881
Score = 35.0 bits (79), Expect = 0.75
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +2
Query: 125 PFSKPNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLS 304
P P A+ + P+ + + S +++S +S++ ++S SSS S
Sbjct: 1794 PTPVPKEAVREGRPQEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 1853
Query: 305 TSSSTSSTSSGPGASKRAPAPALPR 379
+SSS+SS S + P PA P+
Sbjct: 1854 SSSSSSSPSPAKPGPQALPKPASPK 1878
Score = 34.3 bits (77), Expect = 1.3
Identities = 21/67 (31%), Positives = 33/67 (48%)
Frame = +2
Query: 185 PHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTSSSTSSTSSGPGASKRAPA 364
PH G + A A + + ++ ++S SSS S+SSS+SS+ S S+ +
Sbjct: 1721 PHASTGAQQPSALAVLQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSL 1780
Query: 365 PALPRWA 385
PA P A
Sbjct: 1781 PAQPEVA 1787
>ref|NP_780438.1| RIKEN cDNA 5033413A03 [Mus musculus] gi|26354955|dbj|BAC41104.1|
unnamed protein product [Mus musculus]
Length = 2607
Score = 42.4 bits (98), Expect = 0.005
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Frame = +2
Query: 131 SKPNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLSTS 310
++P +A+ ++ S + P ++ G + A +R +S++ ++S SSS S+S
Sbjct: 2428 AQPEVALKRVPSPTPVPKEAIREGRPQEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSS 2487
Query: 311 SST---SSTSSGPGASKRAPAPALP-RWAQVKPADSLESP 418
SS+ SS+SS +S +P+PA P A KPA + P
Sbjct: 2488 SSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPP 2527
Score = 35.4 bits (80), Expect = 0.58
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +2
Query: 125 PFSKPNMAITKMLSASNRPSPHVQFGGARSEAAASGRRVQVASAAVDNASGPSSSGQGLS 304
P P AI + P+ + + S +++S +S++ ++S SSS S
Sbjct: 2440 PTPVPKEAIREGRPQEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2499
Query: 305 TSSSTSSTSSGPGASKRAPAPALPR 379
+SSS+SS S + P PA P+
Sbjct: 2500 SSSSSSSPSPAKPGPQALPKPASPK 2524
Score = 32.0 bits (71), Expect = 6.4
Identities = 17/54 (31%), Positives = 27/54 (49%)
Frame = -1
Query: 539 TPQTVRRVAGTWTLAAAGSRAAVHASCRSPPKAPSAPSRETGSPGCQPASPEPS 378
+P+ + + + S A+ C SPPK+P P + T S C P SP+P+
Sbjct: 279 SPRPLAAIPSSQEPVNPSSEASPTRGC-SPPKSPEKPPQSTSSESC-PPSPQPT 330
Score = 31.6 bits (70), Expect = 8.3
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = +2
Query: 179 PSPHVQFGGARSEAAASGRR-------VQVASAAVDNASGPSSSGQGLSTSSSTSSTSSG 337
P+P + A++G + +Q A ++S SSS S+SSS+SS+SS
Sbjct: 2355 PAPGISHAEGGEPPASTGAQQPSTLAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSS 2414
Query: 338 PGASKRAPAPALPRWAQV 391
+S + +LP +V
Sbjct: 2415 GSSSSDSEGSSLPAQPEV 2432
