KCC000328A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000328A_C01 KCC000328A_c01
GCGAGCTAGGTATATACATAAAAGTAAAGCGGGCTAACCCCGTCCCTTAAAGCAGAGTTT
GGTTGTTCTGCTTGAGTGTCGGAAGGCCAAAATGGCCGCTCCGGACGCTCTTATCGCGGC
CTTCATCCCGGCCTCGGCCGTTGTCGCTATTCTGTTCGCGGTCTTCCTATGGAAGCGTGT
CGCTGCCATCCAGATGACCGGTGGTCGCGTACTTTCGTCCCAGAATGGGCGCGAGTACCT
GCTTGAGGAGGAGCAGCGCGGTGGCGAGGAGGAGATTGTCGCCAAGGCTGCTGATATCCA
GAAATCCATTTCCGAGGGCGCCTCCTCTTTCCTGGCAACTGAGTACTATTACCTCGGTAT
CTTCATGGTCATCATGTCCGTCGTCATCTGCTCTCTGCTGAGCATTGTGACTCCCGAGGA
GGGCCGCACGTCTGCTGATGAGCTGCGCAACGGCGTCTTCTCGACCATCGCCTTCGCTCT
GGGCGGTGCCACCTCCATTCTGTCCGGCTACCTGGGTATGCAGATCGCCACCTTCGCCAA
CGCCCGCACCGCCGTCGAGGCGCGCAAGGGCATTGCCCCTGCCTTCATGTGCGCTTTCCG
CTCGGGCGCCGTGATGGGCTTCCTGCTGTCGGGCTTCGGCCTGCTGAACCTGTTCCTGGC
CATCACCATTTTCTCCAAGTTCTTCGGCGACGACTGGAAGGGCCTGTTCGAGGCCATCAC
TGGCTACGGCCTGGGCGGCTCGTCCATTGCTCTGTTCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000328A_C01 KCC000328A_c01
         (759 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAC44451.1| proton-translocating inorganic pyrophosphatase [...   419  e-116
dbj|BAA33149.1| proton-translocating inorganic pyrophosphatase [...   224  1e-57
gb|AAL84953.1| At1g15690/F7H2_3 [Arabidopsis thaliana]                222  4e-57
ref|NP_173021.1| inorganic pyrophosphatase -related [Arabidopsis...   222  4e-57
dbj|BAA32210.1| Vacuolar proton pyrophosphatase [Arabidopsis tha...   222  4e-57

>emb|CAC44451.1| proton-translocating inorganic pyrophosphatase [Chlamydomonas
           reinhardtii]
          Length = 762

 Score =  419 bits (1078), Expect = e-116
 Identities = 221/222 (99%), Positives = 221/222 (99%)
 Frame = +2

Query: 92  MAAPDALIAAFIPASAVVAILFAVFLWKRVAAIQMTGGRVLSSQNGREYLLEEEQRGGEE 271
           MAAPDALIAAFIPASAVVAILFAVFLWKRVAAIQMTGGRVLSSQNGREYLLEEEQRGGEE
Sbjct: 1   MAAPDALIAAFIPASAVVAILFAVFLWKRVAAIQMTGGRVLSSQNGREYLLEEEQRGGEE 60

Query: 272 EIVAKAADIQKSISEGASSFLATEYYYLGIFMVIMSVVICSLLSIVTPEEGRTSADELRN 451
           EIVAKAADIQKSISEGASSFLATEYYYLGIFMVIMSVVICSLLSIVTPEEGRTSADELRN
Sbjct: 61  EIVAKAADIQKSISEGASSFLATEYYYLGIFMVIMSVVICSLLSIVTPEEGRTSADELRN 120

Query: 452 GVFSTIAFALGGATSILSGYLGMQIATFANARTAVEARKGIAPAFMCAFRSGAVMGFLLS 631
           GVFSTIAFALGGATSILSGYLGMQIATFANARTAVEARKGIAPAFMCAFRSGAVMGFLLS
Sbjct: 121 GVFSTIAFALGGATSILSGYLGMQIATFANARTAVEARKGIAPAFMCAFRSGAVMGFLLS 180

Query: 632 GFGLLNLFLAITIFSKFFGDDWKGLFEAITGYGLGGSSIALF 757
           GFGLLNLFLAITIFSKFFGDDWKGLFEAI GYGLGGSSIALF
Sbjct: 181 GFGLLNLFLAITIFSKFFGDDWKGLFEAI-GYGLGGSSIALF 221

>dbj|BAA33149.1| proton-translocating inorganic pyrophosphatase [Cucurbita moschata]
          Length = 768

 Score =  224 bits (570), Expect = 1e-57
 Identities = 120/236 (50%), Positives = 163/236 (68%), Gaps = 17/236 (7%)
 Frame = +2

Query: 101 PDALIAAFIPASAVVAILFAVFLWKRVAAIQMTGGRVLS------SQNG-REYLLEEEQR 259
           PD     FIP  AV+ I+F++  W  V+ ++++ GR  +      S+NG  +YL+EEE+ 
Sbjct: 7   PDLGTEIFIPVCAVIGIVFSLVQWYYVSQVKLSPGRDAAHNNSAGSKNGYSDYLIEEEEG 66

Query: 260 GGEEEIVAKAADIQKSISEGASSFLATEYYYLGIFMVIMSVVICSLLSIV---------- 409
             +  +V K A+IQ +ISEGA+SFL TEY Y+GIFMV+ +V+I   L  V          
Sbjct: 67  VNDHNVVIKCAEIQSAISEGATSFLFTEYKYVGIFMVLFAVLIFVFLGSVESFSTKPQPC 126

Query: 410 TPEEGRTSADELRNGVFSTIAFALGGATSILSGYLGMQIATFANARTAVEARKGIAPAFM 589
           T ++ RT    L   +FST++F LG  TS++SG+LGM+IAT+ANART +EARKG+  AF+
Sbjct: 127 TYDKTRTCKPALATAIFSTVSFLLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFI 186

Query: 590 CAFRSGAVMGFLLSGFGLLNLFLAITIFSKFFGDDWKGLFEAITGYGLGGSSIALF 757
            AFRSGAVMGFLL+  GLL LF+AI +F  ++GDDW GLFE+ITGYGLGGSS+ALF
Sbjct: 187 TAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWGGLFESITGYGLGGSSMALF 242

>gb|AAL84953.1| At1g15690/F7H2_3 [Arabidopsis thaliana]
          Length = 770

 Score =  222 bits (566), Expect = 4e-57
 Identities = 118/237 (49%), Positives = 156/237 (65%), Gaps = 18/237 (7%)
 Frame = +2

Query: 101 PDALIAAFIPASAVVAILFAVFLWKRVAAIQMTGGRVLSSQNGR--------EYLLEEEQ 256
           P+      +P  AV+ I F++F W  V+ +++T     SS  G         +YL+EEE+
Sbjct: 8   PELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGDYLIEEEE 67

Query: 257 RGGEEEIVAKAADIQKSISEGASSFLATEYYYLGIFMVIMSVVICSLLSIV--------- 409
              ++ +VAK A+IQ +ISEGA+SFL TEY Y+G+FM+  + VI   L  V         
Sbjct: 68  GVNDQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEGFSTDNKP 127

Query: 410 -TPEEGRTSADELRNGVFSTIAFALGGATSILSGYLGMQIATFANARTAVEARKGIAPAF 586
            T +  RT    L    FSTIAF LG  TS+LSG+LGM+IAT+ANART +EARKG+  AF
Sbjct: 128 CTYDTTRTCKPALATAAFSTIAFVLGAVTSVLSGFLGMKIATYANARTTLEARKGVGKAF 187

Query: 587 MCAFRSGAVMGFLLSGFGLLNLFLAITIFSKFFGDDWKGLFEAITGYGLGGSSIALF 757
           + AFRSGAVMGFLL+  GLL L++ I +F  ++GDDW+GLFEAITGYGLGGSS+ALF
Sbjct: 188 IVAFRSGAVMGFLLAASGLLVLYITINVFKIYYGDDWEGLFEAITGYGLGGSSMALF 244

>ref|NP_173021.1| inorganic pyrophosphatase -related [Arabidopsis thaliana]
           gi|399091|sp|P31414|AVP3_ARATH Pyrophosphate-energized
           vacuolar membrane proton pump (Pyrophosphate-energized
           inorganic pyrophosphatase) (H+-PPase)
           gi|282878|pir||A38230 inorganic diphosphatase (EC
           3.6.1.1), H+-translocating pyrophosphate-energized -
           Arabidopsis thaliana gi|166634|gb|AAA32754.1| vacuolar
           H+-phosphatase gi|8927648|gb|AAF82139.1|AC034256_3
           Identical to Vacuolar proton pyrophosphatase (AVP3) from
           Arabidopsis thaliana gb|AB015138 and gb|M81892.  ESTs
           gb|AA006922, gb|AA586042, gb|AA651053, gb|AA712863,
           gb|AA394384, gb|AA605347, gb|AA006474, gb|AA006772,
           gb|AA650817, gb|AA042538, gb|AA006217, gb|AW004149,
           gb|H36252, gb|H36659, gb|R30444, gb|W43600, gb|W43886,
           gb|W43517, gb|W43127, gb|N96656, gb|T14167, gb|T76140,
           gb|T21188, gb|Z17694, gb|Z17695 come from this gene
           gi|27311751|gb|AAO00841.1| Unknown protein [Arabidopsis
           thaliana]
          Length = 770

 Score =  222 bits (566), Expect = 4e-57
 Identities = 118/237 (49%), Positives = 156/237 (65%), Gaps = 18/237 (7%)
 Frame = +2

Query: 101 PDALIAAFIPASAVVAILFAVFLWKRVAAIQMTGGRVLSSQNGR--------EYLLEEEQ 256
           P+      +P  AV+ I F++F W  V+ +++T     SS  G         +YL+EEE+
Sbjct: 8   PELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGDYLIEEEE 67

Query: 257 RGGEEEIVAKAADIQKSISEGASSFLATEYYYLGIFMVIMSVVICSLLSIV--------- 409
              ++ +VAK A+IQ +ISEGA+SFL TEY Y+G+FM+  + VI   L  V         
Sbjct: 68  GVNDQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEGFSTDNKP 127

Query: 410 -TPEEGRTSADELRNGVFSTIAFALGGATSILSGYLGMQIATFANARTAVEARKGIAPAF 586
            T +  RT    L    FSTIAF LG  TS+LSG+LGM+IAT+ANART +EARKG+  AF
Sbjct: 128 CTYDTTRTCKPALATAAFSTIAFVLGAVTSVLSGFLGMKIATYANARTTLEARKGVGKAF 187

Query: 587 MCAFRSGAVMGFLLSGFGLLNLFLAITIFSKFFGDDWKGLFEAITGYGLGGSSIALF 757
           + AFRSGAVMGFLL+  GLL L++ I +F  ++GDDW+GLFEAITGYGLGGSS+ALF
Sbjct: 188 IVAFRSGAVMGFLLAASGLLVLYITINVFKIYYGDDWEGLFEAITGYGLGGSSMALF 244

>dbj|BAA32210.1| Vacuolar proton pyrophosphatase [Arabidopsis thaliana]
          Length = 770

 Score =  222 bits (566), Expect = 4e-57
 Identities = 121/244 (49%), Positives = 160/244 (64%), Gaps = 22/244 (9%)
 Frame = +2

Query: 92  MAAPDALIAAF----IPASAVVAILFAVFLWKRVAAIQMTGGRVLSSQNGR--------E 235
           M AP  L+  +    +P  AV+ I F++F W  V+ +++T     SS  G         +
Sbjct: 1   MVAPALLLELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGD 60

Query: 236 YLLEEEQRGGEEEIVAKAADIQKSISEGASSFLATEYYYLGIFMVIMSVVICSLLSIV-- 409
           YL+EEE+   ++ +VAK A+IQ +ISEGA+SFL TEY Y+G+FM+  + VI   L  V  
Sbjct: 61  YLIEEEEGVNDQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEG 120

Query: 410 --------TPEEGRTSADELRNGVFSTIAFALGGATSILSGYLGMQIATFANARTAVEAR 565
                   T +  RT    L    FSTIAF LG  TS+LSG+LGM+IAT+ANART +EAR
Sbjct: 121 FSTDNKPCTYDTTRTCKPALATAAFSTIAFVLGAVTSVLSGFLGMKIATYANARTTLEAR 180

Query: 566 KGIAPAFMCAFRSGAVMGFLLSGFGLLNLFLAITIFSKFFGDDWKGLFEAITGYGLGGSS 745
           KG+  AF+ AFRSGAVMGFLL+  GLL L++ I +F  ++GDDW+GLFEAITGYGLGGSS
Sbjct: 181 KGVGKAFIVAFRSGAVMGFLLAASGLLVLYITINVFKIYYGDDWEGLFEAITGYGLGGSS 240

Query: 746 IALF 757
           +ALF
Sbjct: 241 MALF 244



EST assemble image


clone accession position
1 HCL089b01_r AV644468 1 586
2 HCL088b07_r AV644418 46 670
3 LCL037c03_r AV628132 97 594
4 HCL007a01_r AV639904 97 499
5 LCL044g11_r AV628631 97 353
6 MXL085a07_r BP097998 97 560
7 MXL060g08_r BP096561 98 260
8 LCL038b12_r AV628198 98 260
9 LCL097b01_r AV631620 99 376
10 LCL024e08_r AV627295 99 243
11 HCL055b12_r AV642640 99 599
12 HCL062f06_r AV643037 99 623
13 MXL071d11_r BP097185 99 549
14 HCL094a01_r AV644799 99 552
15 LCL042c01_r AV628459 99 552
16 LCL079a10_r AV630451 99 210
17 HCL072e10_r AV643602 102 597
18 MXL014b10_r BP093816 102 415
19 MXL100b07_r BP098851 102 467
20 MXL031d07_r BP094871 102 383
21 MX045g08_r BP087888 102 478
22 CL19g10_r AV394205 102 536
23 HCL004h09_r AV639780 103 407
24 MXL067d01_r BP096937 103 492
25 MXL020h06_r BP094303 104 573
26 MXL038h10_r BP095256 104 616
27 LCL020h05_r AV627087 105 562
28 HCL038e07_r AV641676 105 561
29 HCL035a06_r AV641509 106 516
30 LCL013h06_r AV626698 106 562
31 HCL071e05_r AV643550 108 617
32 MXL095c06_r BP098552 108 595
33 HCL012b11_r AV640209 108 293
34 HCL006c01_r AV639857 108 594
35 LCL091g08_r AV631307 108 364
36 LCL051e01_r AV629072 108 573
37 LCL044e05_r AV628610 108 392
38 LCL025g12_r AV627375 108 572
39 MXL076h09_r BP097504 108 480
40 HCL026h06_r AV641050 108 549
41 LCL041d08_r AV628413 108 562
42 LCL048d09_r AV628884 109 209
43 HCL018a04_r AV640538 109 562
44 HCL083e08_r AV644187 110 601
45 HCL028c04_r AV641130 110 583
46 HCL024c07_r AV640892 113 419
47 MXL064c03_r BP096750 114 504
48 HCL039g01_r AV641748 124 595
49 HCL013d06_r AV640265 124 293
50 HCL051f03_r AV642430 126 648
51 HCL071f09_r AV643557 128 620
52 CL36h04_r AV395139 129 668
53 CL54d12_r AV396155 131 643
54 HCL081g12_r AV644100 133 657
55 LCL048d06_r AV628881 134 408
56 MXL058e06_r BP096423 136 583
57 HCL044c12_r AV642039 141 486
58 CL69c04_r AV396820 141 705
59 HCL003g07_r AV639722 149 477
60 MXL002c02_r BP093018 181 661
61 HCL055c11_r AV642647 353 838
62 HCL055c02_r AV642641 372 870




Chlamydomonas reinhardtii
Kazusa DNA Research Institute