KCC000326A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000326A_C01 KCC000326A_c01
CGCCATTGTACATACTACGTGCCGTGTTGACTGCGCTGCTGAGTGGGCATGGCCCTTGCG
CTGCTCGCGTTCGCTCTGCTCCTGGCGCCGGCCCTGACTCTATCTTTTGAAAGTTCACGA
GATGTAGGCAAAGAGCTGCGAGCGGCTGCCACGCGTAAACGTTTCGGGAGCCGAGTCCAG
CCCTCGTTCACGCCGAACCTGCACTCGCTTGAGTTGCTGATTAGCCGCGGCCACTTCTAT
GCAATCAACGTTGCAAATAATGTTGCCGGAGTTTCGGATGGTGCCGCCGGGCGCGCCTGA
GTTTGAGCTGCTGCGGTTGAACCCGCGTGAGGTGGCGTTGCTGGCGTCCAACGCACACGG
GCTCTCGCTGGCGGACGCGCTCAGCCGGAGCCTGCGGGAGCGCTACCCCGAAAGCAACAC
GGGCTGGGCATACTACGCGGACACATACACAGAGGACGGCTGGTACCGACTGGAGATCCG
CACAGACCAGGATGCGCCCTTCCCGGATGTGGTCAAGGCGCGCGCGGCGGGCTTCGTGGA
GGGAAACCTGCAGGCGCCGAACATGTACAGGTTTTGGAGCAACTACCGAAAGAACCAATA
CGCGGGCCGCGGTGAGGCGCCGTCTAAGGAGCTGTTCGCTTTCCTGGACGAGCAGTATGC
CTGGATGACCAAGAGGGTAGAGGCGGCCACGGGCTGGAGCCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000326A_C01 KCC000326A_c01
         (702 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAC82365.1| unknown [Myxococcus xanthus]                            53  5e-06
gb|AAD09141.1| myosin I heavy chain kinase [Acanthamoeba castell...    52  1e-05
gb|AAM43773.1| hypothetical protein [Dictyostelium discoideum] g...    50  3e-05
ref|XP_290770.2| KIAA1447 protein [Homo sapiens]                       48  2e-04
ref|NP_729060.2| lamina ancestor CG10645-PC [Drosophila melanoga...    48  2e-04

>gb|AAC82365.1| unknown [Myxococcus xanthus]
          Length = 542

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 56/171 (32%), Positives = 68/171 (39%), Gaps = 19/171 (11%)
 Frame = -2

Query: 695 SPWPPLPSWSSRHTARPGKRTAP*TAPHRGPRIGSFGSCSKTCTCSAPAGFP----PRSP 528
           +P P  P   +R +A     +A  T P  GP   + G C      SAP   P    P  P
Sbjct: 120 TPCPAPPRCRARPSAPAP--SAGRTCPTAGPSSCASGCCPTGRCGSAPGPTPHGAEPSPP 177

Query: 527 PRAP*PHPG------RAHPGLC-GSPVGTSRPLCMCPR---SMPSPCCFRGSAPAGSG*A 378
            ++P P P       R HP     S  G + P C+ P      P   C R + P+ S   
Sbjct: 178 SQSPSPAPASSGGRRRTHPRPARASAAGATAPACLPPPRCCGRPGTGCARTAPPSTSASH 237

Query: 377 RPPARARVRWTPATPPHA-GSTAAAQTQ----ARPAAPSETPATLFATLIA 240
            PP R+     P TPP A GS AAA        RP  P  TPA   A L A
Sbjct: 238 PPPPRS-----PGTPPRASGSPAAAPAPPSPACRPPPPGTTPAPRNAALPA 283

 Score = 38.5 bits (88), Expect = 0.10
 Identities = 44/149 (29%), Positives = 60/149 (39%), Gaps = 4/149 (2%)
 Frame = -2

Query: 698 SSPWPPLPSWSSRHTARPGKRTAP*TAPHRGPRIGSFG-SCSKTCTCSAPAGFPPRSPPR 522
           ++ +PP  +       R   R+ P    HRG R  SF  +C++      PA  P R   R
Sbjct: 41  TASYPPPQAVPGPCAPRAPPRSPPPRRRHRGSRHRSFRPTCARRSGRRCPA--PSRHARR 98

Query: 521 AP*PHPGRAHPGLCGSPVGTSRPLCMCPRSMPSPCCFRGSAPAGS-G*ARPPARARVRWT 345
            P   P R     CG P  ++   C  P   P  C  R SAPA S G   P A      +
Sbjct: 99  NP-AGPSRR----CGPPRKSTPTRCCTPCPAPPRCRARPSAPAPSAGRTCPTAGPSSCAS 153

Query: 344 PATPPHAGSTAAAQTQ--ARPAAPSETPA 264
              P     +A   T   A P+ PS++P+
Sbjct: 154 GCCPTGRCGSAPGPTPHGAEPSPPSQSPS 182

>gb|AAD09141.1| myosin I heavy chain kinase [Acanthamoeba castellanii]
           gi|4206769|gb|AAD11799.1| myosin I heavy chain kinase
           [Acanthamoeba castellanii]
          Length = 753

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 52/158 (32%), Positives = 58/158 (35%), Gaps = 7/158 (4%)
 Frame = -2

Query: 701 GSSPWPPLPSWSSRHTARPGKRTAP*TAPHRGPRIGSFGSCSKTCTCSAPAGFPPRSPPR 522
           G +P  P P+       RPG   AP  AP    R G+ G      T   P G  PR P  
Sbjct: 272 GGAPAGPGPTTGRGLPPRPG---APNGAPMPLQRGGASGDAPLPLTRGPPGGGAPRGPG- 327

Query: 521 AP*PHPGRAHPGLCGSPVGTSRPLCMCPRSMPSPCCFRGSAPAGSG*ARPPARARVRWTP 342
           AP P PG+  P   G P G   P     +  P     R S P G    RPP  A V  TP
Sbjct: 328 APPPRPGQPAPMRPGQPGGQGVPPPRPGQPAPGRPTMRPSQPGGP--PRPPMPAPVPTTP 385

Query: 341 A-------TPPHAGSTAAAQTQARPAAPSETPATLFAT 249
                    P  A + A A     PAA    P    AT
Sbjct: 386 TAAVTPAPVPVPAPAPAPAPADTTPAAGPPRPTPPIAT 423

 Score = 35.4 bits (80), Expect = 0.86
 Identities = 30/104 (28%), Positives = 34/104 (31%), Gaps = 12/104 (11%)
 Frame = -2

Query: 542 PPRSPPRAP*PHPGRAHPGLCGSPVGTSRPLCMCPRSMPSPCCFR-----GSAPAGSG*A 378
           PP   P  P P  GR  P   G+P G   PL     S  +P         G AP G G  
Sbjct: 270 PPGGAPAGPGPTTGRGLPPRPGAPNGAPMPLQRGGASGDAPLPLTRGPPGGGAPRGPGAP 329

Query: 377 RPPARARVRWTP-------ATPPHAGSTAAAQTQARPAAPSETP 267
            P         P         PP  G  A  +   RP+ P   P
Sbjct: 330 PPRPGQPAPMRPGQPGGQGVPPPRPGQPAPGRPTMRPSQPGGPP 373

>gb|AAM43773.1| hypothetical protein [Dictyostelium discoideum]
           gi|28829555|gb|AAO52073.1| similar to Dictyostelium
           discoideum (Slime mold). Phospholipase B
          Length = 554

 Score = 50.4 bits (119), Expect = 3e-05
 Identities = 35/137 (25%), Positives = 66/137 (47%), Gaps = 17/137 (12%)
 Frame = +2

Query: 332 VALLASNAHGLSLADALSRS---------------LRERYPESNTGWAYYADTYTEDGWY 466
           +  L SN++ LS +D+ S S               ++ +    +  W Y+ D   +DGW 
Sbjct: 10  IVFLISNSYSLSSSDSSSDSGSDVQYYSLTSQFQVVQGKQIPGSIAWGYFKDEMNKDGWG 69

Query: 467 RLEIRTDQDAPFPDVVKARAAGFVEGNLQAPNMYRFWSNYRKNQY--AGRGEAPSKELFA 640
           +L I T   +   D +  +AAG++EG L    +Y+F  NY  + +  +   E P+ E   
Sbjct: 70  KLSIET--VSTVSDNIAFKAAGYLEGYLTWEYIYKFSGNYFNSFFNTSNIKEIPT-ETLT 126

Query: 641 FLDEQYAWMTKRVEAAT 691
           F+ + + +M +RV +++
Sbjct: 127 FVSDNWEYMMERVNSSS 143

>ref|XP_290770.2| KIAA1447 protein [Homo sapiens]
          Length = 174

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 54/167 (32%), Positives = 65/167 (38%), Gaps = 22/167 (13%)
 Frame = -2

Query: 701 GSSPWPPLP-SWSSRHT-ARPGKR---TAP*TAPHR-------GPRIGSFGSCSKTCTCS 558
           G  P P  P  W    T AR   R   TA  TAP R       G R     + S  C C 
Sbjct: 13  GGHPSPRCPWGWRCASTRARQSSRCPTTATATAPSRTRTRTGRGWRPACPPASSPACPCP 72

Query: 557 APAGFPPRSPPRAP*PHPGRAHPGLCGSPVG--TSRPLCMCPRSMPSPC-----CFRGSA 399
            P    P  PP+AP P P  A P     P    T   LC C  + P+PC       R  A
Sbjct: 73  LPPLARPPPPPQAPCPPPASAPPTTRTRPTAQTTRTRLCCCRPASPTPCPPSWPSPRPCA 132

Query: 398 PAGSG*ARPPARARV---RWTPATPPHAGSTAAAQTQARPAAPSETP 267
           P  +   R P+ A     RW    P  A + AAA   A P++ ++ P
Sbjct: 133 PRAAALTRMPSAASCPGPRW--LAPVRAQAPAAA---ANPSSSAKRP 174

>ref|NP_729060.2| lamina ancestor CG10645-PC [Drosophila melanogaster]
           gi|28574971|ref|NP_523933.3| lamina ancestor CG10645-PB
           [Drosophila melanogaster] gi|28574972|ref|NP_729059.2|
           lamina ancestor CG10645-PA [Drosophila melanogaster]
           gi|28380601|gb|AAG22333.2| CG10645-PA [Drosophila
           melanogaster] gi|28380602|gb|AAF50787.3| CG10645-PB
           [Drosophila melanogaster] gi|28380603|gb|AAN12118.2|
           CG10645-PC [Drosophila melanogaster]
          Length = 658

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 23/57 (40%), Positives = 35/57 (61%)
 Frame = +2

Query: 413 SNTGWAYYADTYTEDGWYRLEIRTDQDAPFPDVVKARAAGFVEGNLQAPNMYRFWSN 583
           +  G   Y D+  E+GW ++E+ T +   +PD V+A AAG +EG+L   N+Y  WSN
Sbjct: 72  TGVGRICYKDSVYENGWAQIEVETQRT--YPDWVQAYAAGMLEGSLTWRNIYNQWSN 126



EST assemble image


clone accession position
1 CL77e05_r AV397282 1 514
2 LCL070d08_r AV629982 46 551
3 LCL070d10_r AV629983 48 314
4 LCL007b05_r AV626332 51 387
5 HCL040b07_r AV641784 56 551
6 LCL046c05_r AV628728 57 575
7 HCL091f02_r AV644640 76 578
8 HCL053h07_r AV642560 89 551
9 LCL072a06_r AV630050 89 417
10 LCL096f08_r AV631596 90 458
11 CL19e11_r AV394195 96 636
12 MXL020h08_r BP094305 337 802




Chlamydomonas reinhardtii
Kazusa DNA Research Institute