Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000323A_C01 KCC000323A_c01
(560 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P40590|RL34_PEA 60S RIBOSOMAL PROTEIN L34 gi|2119150|pir||S60... 133 1e-30
sp|P41098|RL34_TOBAC 60S RIBOSOMAL PROTEIN L34 gi|1076636|pir||S... 133 2e-30
ref|NP_174010.1| 60S ribosomal protein L34 (RPL34A) [Arabidopsis... 130 1e-29
gb|AAM66030.1| 60s ribosomal protein L34 [Arabidopsis thaliana] 130 1e-29
ref|NP_177120.1| 60S ribosomal protein L34 (RPL34B) [Arabidopsis... 129 2e-29
>sp|P40590|RL34_PEA 60S RIBOSOMAL PROTEIN L34 gi|2119150|pir||S60476 ribosomal protein
L34, cytosolic - garden pea gi|498908|gb|AAA86953.1|
ribosomal protein L34 homolog
Length = 120
Score = 133 bits (335), Expect = 1e-30
Identities = 69/119 (57%), Positives = 84/119 (69%), Gaps = 2/119 (1%)
Frame = +1
Query: 4 MAPRMTYRRRHSYHTKSNAVRIVKTPGGKLVYQYKKKQEKHPKCPVSGARLHGFAATPHT 183
M R+TYRRRHSY TKSN R+VKTPGGKLVYQ KK+ PKCPV+G R+ G T
Sbjct: 1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 184 QL--HTLPKRAKKVNRIYGGCLSHKVVKERIIRAFLIEEQKIVKKVLKLQKAQQEKPTK 354
+ L + + VNR YGG LS V+ERIIRAFL+EEQKIVKKVLK+QK ++++ K
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAAK 119
>sp|P41098|RL34_TOBAC 60S RIBOSOMAL PROTEIN L34 gi|1076636|pir||S48027 ribosomal protein
L34, cytosolic - common tobacco gi|436030|gb|AAA57158.1|
60S ribosomal protein L34 gi|436032|gb|AAA57159.1| 60S
ribosomal protein L34
Length = 120
Score = 133 bits (334), Expect = 2e-30
Identities = 68/119 (57%), Positives = 84/119 (70%), Gaps = 2/119 (1%)
Frame = +1
Query: 4 MAPRMTYRRRHSYHTKSNAVRIVKTPGGKLVYQYKKKQEKHPKCPVSGARLHGFAATPHT 183
M R+TYR+RHSY TKSN R+VKTPGGKL+YQ KK+ PKCPV+G R+ G T
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 184 QL--HTLPKRAKKVNRIYGGCLSHKVVKERIIRAFLIEEQKIVKKVLKLQKAQQEKPTK 354
+ L + + VNR YGG LS V+ERIIRAFL+EEQKIVKKVLK+QKA+++ K
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAK 119
>ref|NP_174010.1| 60S ribosomal protein L34 (RPL34A) [Arabidopsis thaliana]
gi|2500376|sp|Q42351|RL34_ARATH 60S ribosomal protein
L34 gi|25295628|pir||F86395 60s ribosomal protein L34
[imported] - Arabidopsis thaliana
gi|4262177|gb|AAD14494.1| 23552
gi|19310599|gb|AAL85030.1| putative 60s ribosomal
protein L34 [Arabidopsis thaliana]
gi|21436403|gb|AAM51402.1| putative 60S ribosomal
protein L34 [Arabidopsis thaliana]
Length = 120
Score = 130 bits (327), Expect = 1e-29
Identities = 71/122 (58%), Positives = 83/122 (67%), Gaps = 5/122 (4%)
Frame = +1
Query: 4 MAPRMTYRRRHSYHTKSNAVRIVKTPGGKLVYQYKKKQEKHPKCPVSGARLHGFAATPHT 183
M R+ YR RHSY TKSN RIVKTPGGKLVYQ KK+ PKCPV+G R+ G PH
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGI---PHL 57
Query: 184 -----QLHTLPKRAKKVNRIYGGCLSHKVVKERIIRAFLIEEQKIVKKVLKLQKAQQEKP 348
+ L + + VNR YGG LS V+ERIIRAFL+EEQKIVKKVLKLQKA+++
Sbjct: 58 RPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVA 117
Query: 349 TK 354
K
Sbjct: 118 PK 119
>gb|AAM66030.1| 60s ribosomal protein L34 [Arabidopsis thaliana]
Length = 120
Score = 130 bits (327), Expect = 1e-29
Identities = 71/122 (58%), Positives = 83/122 (67%), Gaps = 5/122 (4%)
Frame = +1
Query: 4 MAPRMTYRRRHSYHTKSNAVRIVKTPGGKLVYQYKKKQEKHPKCPVSGARLHGFAATPHT 183
M R+ YR RHSY TKSN RIVKTPGGKLVYQ KK+ PKCPV+G R+ G PH
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKKASGPKCPVTGKRIQGI---PHL 57
Query: 184 -----QLHTLPKRAKKVNRIYGGCLSHKVVKERIIRAFLIEEQKIVKKVLKLQKAQQEKP 348
+ L + + VNR YGG LS V+ERIIRAFL+EEQKIVKKVLKLQKA+++
Sbjct: 58 RPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVA 117
Query: 349 TK 354
K
Sbjct: 118 PK 119
>ref|NP_177120.1| 60S ribosomal protein L34 (RPL34B) [Arabidopsis thaliana]
gi|25295629|pir||H96717 probable 60S ribosomal protein
L34 T6C23.18 [imported] - Arabidopsis thaliana
gi|10092293|gb|AAG12705.1|AC021046_6 60S ribosomal
protein L34, putative; 10936-9755 [Arabidopsis thaliana]
gi|11692902|gb|AAG40054.1|AF324703_1 T6C23.18
[Arabidopsis thaliana]
gi|11993857|gb|AAG42912.1|AF327531_1 putative 60S
ribosomal protein L34 [Arabidopsis thaliana]
gi|12325186|gb|AAG52537.1|AC013289_4 putative 60S
ribosomal protein L34; 81002-79821 [Arabidopsis
thaliana] gi|13194822|gb|AAK15573.1|AF349526_1 putative
60S ribosomal protein L34 [Arabidopsis thaliana]
gi|15450705|gb|AAK96624.1| F24J1.23/F24J1.23
[Arabidopsis thaliana]
gi|17386144|gb|AAL38618.1|AF446885_1 F24J1.23/F24J1.23
[Arabidopsis thaliana] gi|21553675|gb|AAM62768.1| 60S
ribosomal protein L34, putative [Arabidopsis thaliana]
Length = 119
Score = 129 bits (325), Expect = 2e-29
Identities = 69/119 (57%), Positives = 81/119 (67%), Gaps = 2/119 (1%)
Frame = +1
Query: 4 MAPRMTYRRRHSYHTKSNAVRIVKTPGGKLVYQYKKKQEKHPKCPVSGARLHGFAATPHT 183
M R+ YR RHSY TKSN RIVKTPGGKL YQ KK+ PKCPV+G R+ G T
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 184 QL--HTLPKRAKKVNRIYGGCLSHKVVKERIIRAFLIEEQKIVKKVLKLQKAQQEKPTK 354
+ L + + VNR YGG LS V+ERIIRAFL+EEQKIVKKVLKLQKA+++ K
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119
