Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000318A_C01 KCC000318A_c01
(557 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC44888.1| unknown [Nannocystis exedens] 45 7e-04
dbj|BAC00740.1| hypothetical protein [Oryza sativa (japonica cul... 40 0.016
gb|AAG33966.1|AF229246_1 SCAND2 [Homo sapiens] gi|11345048|gb|AA... 40 0.016
ref|NP_071333.2| SCAN domain-containing protein 2 isoform 1; SCA... 40 0.016
ref|ZP_00102088.1| COG1136: ABC-type antimicrobial peptide trans... 39 0.036
>gb|AAC44888.1| unknown [Nannocystis exedens]
Length = 290
Score = 45.1 bits (105), Expect = 7e-04
Identities = 47/142 (33%), Positives = 56/142 (39%), Gaps = 9/142 (6%)
Frame = -1
Query: 509 SRCWKTWSVT--PQLAGTSPPS------CGSLAGRRPPCGPTARSPAPTSRALVATFGRF 354
SR TWS T P + SPPS C P P+ARSP P S R
Sbjct: 49 SRTPPTWSATSPPSRSPCSPPSSRCVRPCRVAPTGSPAPRPSARSPTPCSSR-----SRA 103
Query: 353 RSNSTARRPARSVAPPAGAERPRPRHRLLHCCCWSRRCCYRRRRAPTSSSTRCAVVLSRS 174
S+STAR PA + A P P CWS P SSST SR+
Sbjct: 104 PSSSTARSPASAAATPTSNPNP----------CWS-------SAPPASSSTSPRPGTSRA 146
Query: 173 QASTG-TAELVKQHILAGSAGA 111
A+T H+LA + G+
Sbjct: 147 PAATNINIRGALIHMLADALGS 168
>dbj|BAC00740.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 270
Score = 40.4 bits (93), Expect = 0.016
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +1
Query: 238 QQRRDQQQQCRRRWRGRGRSAPAGGATLRAGRRAVELLRNRPNVATSARDVGAGLRAVGP 417
Q+ RD+++ +R+ GRGR GG+ RA RR R VA D+ G+ +G
Sbjct: 47 QRDRDERRHGKRQ-NGRGRRGGGGGSPHRAPRRPPATTGGRGRVAEHLLDLAKGMEGLGR 105
Query: 418 Q-----GGRRPARLPQDGGEVPASCG 480
+ GGR + GG V +CG
Sbjct: 106 EEEVRGGGRCAVGCGERGGCVGIACG 131
>gb|AAG33966.1|AF229246_1 SCAND2 [Homo sapiens] gi|11345048|gb|AAG34567.1|AF244812_1 SCAN
domain-containing protein 2 [Homo sapiens]
Length = 306
Score = 40.4 bits (93), Expect = 0.016
Identities = 34/93 (36%), Positives = 49/93 (52%)
Frame = +3
Query: 156 RPRARLRARKNNGAPGGAACRSSPPPITAAA*PAAAVQKAMAWTWSLGSCGRRYTACRAT 335
R R RAR + P A SP P+TAA PA+ + + T S SC R+ C A
Sbjct: 129 RQRLEPRARPSGRTP--PAQLRSPWPMTAAG-PASRARASE--TGSTASCAGRWRTCCAA 183
Query: 336 SSGIAPESPKCCNERSRCRSGAACSRPARRPSA 434
++ AP + + + R+ RS ++C+R AR PSA
Sbjct: 184 AA--APSAARSASARTG-RSTSSCARAARAPSA 213
>ref|NP_071333.2| SCAN domain-containing protein 2 isoform 1; SCAN domain-containing
2 [Homo sapiens] gi|15991817|ref|NP_378659.1| SCAN
domain-containing protein 2 isoform 1; SCAN
domain-containing 2 [Homo sapiens]
gi|15991819|ref|NP_378660.1| SCAN domain-containing
protein 2 isoform 1; SCAN domain-containing 2 [Homo
sapiens] gi|15991821|ref|NP_378661.1| SCAN
domain-containing protein 2 isoform 1; SCAN
domain-containing 2 [Homo sapiens]
gi|15991823|ref|NP_378662.1| SCAN domain-containing
protein 2 isoform 1; SCAN domain-containing 2 [Homo
sapiens] gi|29839632|sp|Q9GZW5|SDP2_HUMAN SCAN
domain-containing protein 2
Length = 306
Score = 40.4 bits (93), Expect = 0.016
Identities = 34/93 (36%), Positives = 49/93 (52%)
Frame = +3
Query: 156 RPRARLRARKNNGAPGGAACRSSPPPITAAA*PAAAVQKAMAWTWSLGSCGRRYTACRAT 335
R R RAR + P A SP P+TAA PA+ + + T S SC R+ C A
Sbjct: 129 RQRLEPRARPSGRTP--PAQLRSPWPMTAAG-PASRARASE--TGSTASCAGRWRTCCAA 183
Query: 336 SSGIAPESPKCCNERSRCRSGAACSRPARRPSA 434
++ AP + + + R+ RS ++C+R AR PSA
Sbjct: 184 AA--APSAARSASARTG-RSTSSCARAARAPSA 213
>ref|ZP_00102088.1| COG1136: ABC-type antimicrobial peptide transport system, ATPase
component [Desulfitobacterium hafniense]
Length = 355
Score = 39.3 bits (90), Expect = 0.036
Identities = 32/69 (46%), Positives = 36/69 (51%), Gaps = 3/69 (4%)
Frame = +1
Query: 244 RRDQQQQCRRRWRGRGRSAPAGGATLR-AGRRAVELLRNRPNVATSARDVGAGLRA--VG 414
RR QQ Q RRR RG R APA TL+ A RR +L + R R +G G RA
Sbjct: 15 RRQQQPQPRRR-RGLRRRAPAHARTLQPAVRRVPQLAQRRTEEDLGQRSLGLGQRAPRAV 73
Query: 415 PQGGRRPAR 441
Q GRR AR
Sbjct: 74 VQVGRRKAR 82
