KCC000303A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000303A_C01 KCC000303A_c01
ctcctgttcctccttcggccagctcgggcgtccagtttgcttgCGCCCTTTACACCGGCC
AGAATGTCAACCCTGGCATCAGCACCTTCAGCCATCACCGACGCAGTTTACAAGACTTTT
ACGGACGTGACGACTGCCGTTGCAACGGACGCCAACTATTTCGCGGATCAGCAGCTGCGC
GTCGTCACCATGGCGCCTGGCACTGGGCGGGTGTCGTGCACATTTCCGACTCTGTATGCC
GCCGCTGGGCCTTTCTCACCCAAATTTTTTGTCTTCGAGTATGCCAGCTCAACGGTTGGA
GCGAATGCGTTGGCCGTCGCCGACACGGTGACTTCGTTGACCTCCTTCACGACTCAAGCG
GCGCCCACGTTCATTACTGGTCCTACCAACGTGCCTCAAAGGGTTCCATTACCCAAAGGC
TTCCGCACGACTTGCTTCGACGGGTACGAGCTCATCTTCAGCAACGACAACTACACAAAC
GGTGTTCGTGTGGCGGTCGACGCCTACCCATATCCCGTTGGCCAGTGCCGCAAGTGCCCT
GGCGGTACTGCCACCATGGACGGCTACCGCTGCATTCCCTGCCCCTCGGGCTACTGGAGC
AATGAGGGCGCCCGCGAGTGCACTGCCTGCCCCGCCGGCACCATCGCCAAGCCCGCCGCG
CTCACCGCTCGTGCCAAGTACAGCATCGACCCCACGACCTACCATTTCGTGACACACCTG
GCGATGGGCCCTGAGTCCTGCAAGAAGTGCCCCACGGGGTACTTCCAGCCCAACATTGCC
GGCACCGTGTGCCTGCCCTGCCCACTCGGGATTCGTGTCAACTTCTGGCGCTACGGGTTG
ACTGCGTGTCCGAGGGCACGTACA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000303A_C01 KCC000303A_c01
         (864 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAM33652.1|AF508983_1 mastigoneme-like protein [Chlamydomonas...   515  e-154
pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [...    56  1e-10
gb|EAA40993.1| GLP_25_73483_71861 [Giardia lamblia ATCC 50803]         60  5e-08
ref|NP_821286.1| hypothetical protein [Streptomyces avermitilis ...    59  8e-08
ref|NP_650778.1| CG6026-PA [Drosophila melanogaster] gi|10726612...    55  1e-06

>gb|AAM33652.1|AF508983_1 mastigoneme-like protein [Chlamydomonas reinhardtii]
          Length = 1997

 Score =  515 bits (1327), Expect(2) = e-154
 Identities = 247/258 (95%), Positives = 247/258 (95%)
 Frame = +1

Query: 76   ASAPSAITDAVYKTFTDVTTAVATDANYFADQQLRVVTMAPGTGRVSCTFPTLYAAAGPF 255
            ASAPSAITDAVYKTFTDVTTAVATDANYFADQQLRVVTMAPGTGRVSCTFPTLYAAAGPF
Sbjct: 1070 ASAPSAITDAVYKTFTDVTTAVATDANYFADQQLRVVTMAPGTGRVSCTFPTLYAAAGPF 1129

Query: 256  SPKFFVFEYASSTVGANALAVADTVTSLTSFTTQAAPTFITGPTNVPQRVPLPKGFRTTC 435
            SPKFFVFEYASSTVGANALAVADTVTSLTSFTTQAAPTFITGPTNVPQRVPLPKGFRTTC
Sbjct: 1130 SPKFFVFEYASSTVGANALAVADTVTSLTSFTTQAAPTFITGPTNVPQRVPLPKGFRTTC 1189

Query: 436  FDGYELIFSNDNYTNGVRVAVDAYPYPVGQCRKCPGGTATMDGYRCIPCPSGYWSNEGAR 615
            FDGYELIFSNDNYTNGVRVAVDAYPYPVGQCRKCPGGTATMDGYRCIPCPSGYWSNEGAR
Sbjct: 1190 FDGYELIFSNDNYTNGVRVAVDAYPYPVGQCRKCPGGTATMDGYRCIPCPSGYWSNEGAR 1249

Query: 616  ECTACPAGTIAKPAALTARAKYSIDPTTYHFVTHLAMGPESCKKCPTGYFQPNIAGTVCL 795
            ECTACPAGTIAKPAALTARAKYSIDPTTYHFVTHLAMGPESCKKCP GYFQPNIAGTVCL
Sbjct: 1250 ECTACPAGTIAKPAALTARAKYSIDPTTYHFVTHLAMGPESCKKCPKGYFQPNIAGTVCL 1309

Query: 796  PCPLGIRVNFWRYGLTAC 849
            PCP G        G TAC
Sbjct: 1310 PCPSGFVSTSGATGCTAC 1327

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 50/185 (27%), Positives = 62/185 (33%), Gaps = 32/185 (17%)
 Frame = +1

Query: 403  VPLPKGFRTT--------CFDGYELIFSNDNYTNGVRVAVDA-------YPYPVGQCRKC 537
            +P P GF +T        C +G          T G   ++D        YP     CR+C
Sbjct: 1309 LPCPSGFVSTSGATGCTACSEGTYHTDGVGTTTPGEATSLDTTDTFGSIYPIIPNTCRQC 1368

Query: 538  PGGT----------------ATMDGYRCIPCPSGYWS-NEGARECTACPAGTIAKPAALT 666
            P  T                A      C PC  G WS   GA  C  CP GT        
Sbjct: 1369 PANTYLPLRGQAAIASMNLAAVSSATPCRPCEDGTWSLRAGAAGCQKCPPGTYRNTWFSG 1428

Query: 667  ARAKYSIDPTTYHFVTHLAMGPESCKKCPTGYFQPNIAGTVCLPCPLGIRVNFWRYGLTA 846
                  I        T L      C +CP G + P    +VCLPCP G   +    G TA
Sbjct: 1429 QLGSPFITADGVPVATTLTELGSGCSQCPPGTYAPTFGMSVCLPCPAGTFAS--APGATA 1486

Query: 847  CPRAR 861
            C + +
Sbjct: 1487 CQQCK 1491

 Score = 55.8 bits (133), Expect = 9e-07
 Identities = 48/149 (32%), Positives = 58/149 (38%), Gaps = 6/149 (4%)
 Frame = +1

Query: 343  SFTTQAAPTFITGPTNVPQRVPLPKGFR--TTCFDGYELIFSNDNYTNGVRVAVDAYPYP 516
            +FT  AA    T  T       L KG +  T C  GY    S+   T     AV  Y   
Sbjct: 1644 TFTNVAAAANATFNTATLIPTGLVKGAQAPTPCGMGY--FQSSAETTTCTACAVGTYADQ 1701

Query: 517  VG--QCRKC-PGGTATMDGYR-CIPCPSGYWSNEGARECTACPAGTIAKPAALTARAKYS 684
             G   C+ C PG      G R C PC  G +S  G   CT CPAGT+A     +      
Sbjct: 1702 AGLAACKPCQPGRYQNSIGQRVCKPCDMGTYSRYGGELCTKCPAGTVASKTGSS-----Q 1756

Query: 685  IDPTTYHFVTHLAMGPESCKKCPTGYFQP 771
              P    F  +      SC+ CP GY+ P
Sbjct: 1757 CTPCAAGFYANAPDSATSCRACPRGYYGP 1785

 Score = 54.3 bits (129), Expect(2) = e-154
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 3    PVPPSASSGVQFACALYTGQNVNP 74
            PVPPSASSGVQFACALYTGQNVNP
Sbjct: 1046 PVPPSASSGVQFACALYTGQNVNP 1069

 Score = 46.2 bits (108), Expect = 7e-04
 Identities = 34/113 (30%), Positives = 52/113 (45%), Gaps = 14/113 (12%)
 Frame = +1

Query: 553  TMDGYRCIPCPSGYWSNEGARE-CTACPAGT-----------IAKPAALT--ARAKYSID 690
            T+DG +C  C +G +++E ++  C AC +G+           IA+P   T  A A  +  
Sbjct: 1597 TVDGTQCYTCQTGTFNDEFSQPVCKACWSGSFASKRGLPTCEIAQPGTFTNVAAAANATF 1656

Query: 691  PTTYHFVTHLAMGPESCKKCPTGYFQPNIAGTVCLPCPLGIRVNFWRYGLTAC 849
             T     T L  G ++   C  GYFQ +   T C  C +G   +  + GL AC
Sbjct: 1657 NTATLIPTGLVKGAQAPTPCGMGYFQSSAETTTCTACAVGTYAD--QAGLAAC 1707

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 35/106 (33%), Positives = 40/106 (37%), Gaps = 13/106 (12%)
 Frame = +1

Query: 577  PCPSGYW-SNEGARECTACPAGTIAKPAALTA-------RAKYSIDPTTYH---FVTHLA 723
            PC  GY+ S+     CTAC  GT A  A L A       R + SI           T+  
Sbjct: 1675 PCGMGYFQSSAETTTCTACAVGTYADQAGLAACKPCQPGRYQNSIGQRVCKPCDMGTYSR 1734

Query: 724  MGPESCKKCPTGYFQPNIAGTVCLPCPLGIRVNF--WRYGLTACPR 855
             G E C KCP G        + C PC  G   N         ACPR
Sbjct: 1735 YGGELCTKCPAGTVASKTGSSQCTPCAAGFYANAPDSATSCRACPR 1780

 Score = 39.7 bits (91), Expect = 0.065
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
 Frame = +1

Query: 31   SSLLAPFTPARMSTLASAPSAITDA------------VYKTFTDVTTAVATDANYFA--- 165
            +S+++P TP ++ST  +    IT              + + F    TA A+ A Y+    
Sbjct: 874  TSVVSPATPVKVSTPVTYTFTITRTTAVPAGGIPQPIICEFFNGEGTAPASAAAYWRVST 933

Query: 166  ---DQQLRVVTMAPGTGRVSCTFPTLY--AAAGPFSPKFFVF-EYASSTVGANALAV--A 321
               D    V  MAPG    +CTF T Y   +AG F+ K  VF E A++     +L+V  +
Sbjct: 934  TIPDADTVVAVMAPGETTTTCTFTTYYTTVSAGGFTAKLMVFGESATAAPLLTSLSVTPS 993

Query: 322  DTVTSLTSFTT 354
              + ++ SF T
Sbjct: 994  QLLAAVHSFAT 1004

 Score = 35.8 bits (81), Expect = 0.94
 Identities = 24/82 (29%), Positives = 31/82 (37%)
 Frame = +2

Query: 554  PWTATAAFPAPRATGAMRAPASALPAPPAPSPSPPRSPLVPSTASTPRPTIS*HTWRWAL 733
            P TA      P  + +   P  A P PP+P+P  PR P     +  P PT    +   + 
Sbjct: 1856 PKTARTEQSPPPPSPSPPPPPPASPRPPSPNPPSPRPPSPAPPSPNPPPTSQPPSPPPSP 1915

Query: 734  SPARSAPRGTSSPTLPAPCACP 799
             P R  P     P    P A P
Sbjct: 1916 PPPRPPPPRRPHPARRPPTALP 1937

 Score = 33.5 bits (75), Expect = 4.6
 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = +2

Query: 551  PPWTATAAFPAPRATGAMRAPASALPAPPAP---SPSPPRSPLVPSTASTPRPTIS*HTW 721
            PP  + +  P P A+    +P    P PP+P   SP+PP +   PS   +P P       
Sbjct: 1865 PPPPSPSPPPPPPASPRPPSPNPPSPRPPSPAPPSPNPPPTSQPPSPPPSPPPPRPPPPR 1924

Query: 722  RWALSPARSAPRGTSSPTLPA 784
            R    PAR  P     P  PA
Sbjct: 1925 R--PHPARRPPTALPPPPPPA 1943

 Score = 33.1 bits (74), Expect = 6.1
 Identities = 20/52 (38%), Positives = 22/52 (41%), Gaps = 1/52 (1%)
 Frame = +1

Query: 547  TATMDGYRCIPCPSG-YWSNEGARECTACPAGTIAKPAALTARAKYSIDPTT 699
            T T  G  C  CP G Y    G   C  CPAGT A     TA  +   +P T
Sbjct: 1445 TLTELGSGCSQCPPGTYAPTFGMSVCLPCPAGTFASAPGATACQQCKPEPGT 1496

>pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [imported] -
           Boreogadus saida gi|2078483|gb|AAC60129.1| antifreeze
           glycopeptide AFGP polyprotein precursor
          Length = 507

 Score = 56.2 bits (134), Expect = 7e-07
 Identities = 48/147 (32%), Positives = 70/147 (46%), Gaps = 9/147 (6%)
 Frame = +2

Query: 413 PKASARLASTGTSSSSATTTTQTVFVWRSTPTHIPLASAASALAVLPPWTATAAFPAPRA 592
           P  +A  A+  TS+++AT          +TP   P  +A +A A  P   ATAA  A  A
Sbjct: 146 PATAATAATAATSATAATAARAATPATAATPA-TPATAARAARAATPATAATAATAATAA 204

Query: 593 TGAMRAPAS--ALPAPPAPSPSPPRSPLVPSTASTPRPTIS*HTWRWALSPARSAPRGT- 763
           T A  A A+  A PA  A + +P  +P  P+TA+TP    +  T   A +PAR+A   T 
Sbjct: 205 TAATAATAATAATPARAARAATPATAP-TPATAATPATAATAATAPTAATPARAARAATP 263

Query: 764 ------SSPTLPAPCACPAHSGFVSTS 826
                 ++   PA  A PA +   +T+
Sbjct: 264 ATAATLATAATPATPATPATAATDATA 290

 Score = 54.7 bits (130), Expect(2) = 1e-10
 Identities = 45/142 (31%), Positives = 67/142 (46%), Gaps = 7/142 (4%)
 Frame = +2

Query: 422 SARLASTGTSSSSATTTTQTVFVWRSTPTHI--PLASAASALAVLPPWTATAAFPAPRAT 595
           +AR A+  T++++AT  T       +T      P  +A +A     P  ATAA PA  AT
Sbjct: 185 AARAATPATAATAATAATAATAATAATAATAATPARAARAATPATAPTPATAATPATAAT 244

Query: 596 GAMRAPASALPAPPAPSPSPPRSPLV-----PSTASTPRPTIS*HTWRWALSPARSAPRG 760
            A  AP +A PA  A + +P  +  +     P+T +TP    +  T   A +PAR+A   
Sbjct: 245 AAT-APTAATPARAARAATPATAATLATAATPATPATPATAATDATAATAATPARAA--- 300

Query: 761 TSSPTLPAPCACPAHSGFVSTS 826
             +P  PA  A PA     +T+
Sbjct: 301 --TPATPATAATPATPATAATA 320

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 48/158 (30%), Positives = 70/158 (43%), Gaps = 3/158 (1%)
 Frame = +2

Query: 371 SLLVLPTCLKGFHYPKASARLASTGTSSSSATTTTQTVFVWRSTPTHIPLASAASALAVL 550
           S L+ P+C     Y +    +A    ++ +AT  T       +TP     A A  A A  
Sbjct: 5   SCLLGPSCTSSPRYEQHQLLVARPAAAARAATPATAATPATAATPATAATA-ATEATAAT 63

Query: 551 PPWTATAAFPAPRATGAMRAPASALPAPPAPSPSPPRSPLVPSTASTPRPTIS*HTWRWA 730
               ATAA PA  AT A  A A+A  A  A +P+       P+TA+TP    +  T   A
Sbjct: 64  AATPATAATPATAATAATTA-ATAATAATAATPARAARAATPATAATPATAATAATAATA 122

Query: 731 L---SPARSAPRGTSSPTLPAPCACPAHSGFVSTSGAT 835
               +PAR+A   T++   PA  A PA +   +T+  +
Sbjct: 123 ATAETPARAATPATAA--TPATAATPATAATAATAATS 158

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 45/141 (31%), Positives = 64/141 (44%), Gaps = 7/141 (4%)
 Frame = +2

Query: 425 ARLASTGTSSSSATTTTQTVFVWRSTPTHIPLASAAS--ALAVLPPWTATAAFPAPRATG 598
           A  A+  T + +AT  T       +TP     A+ A+  A A  P   A AA PA  AT 
Sbjct: 288 ATAATAATPARAATPATPATAATPATPATAATAATAATAATAATPARAARAATPATAATP 347

Query: 599 AMRAPAS----ALPAPPAPSPSPPRSPLVPSTASTPRPTIS*HTWRWALSPARSAPRGT- 763
           A  A A+    A  A  A +P+       P+TA+T     +  T   A +PAR+A   T 
Sbjct: 348 ATAATAATAATAATAATAATPARAARAATPATAATAATAATAATAATAATPARAARAATP 407

Query: 764 SSPTLPAPCACPAHSGFVSTS 826
           ++P  PA  A PA +   +T+
Sbjct: 408 ATPATPATPATPATAATAATA 428

 Score = 51.2 bits (121), Expect = 2e-05
 Identities = 41/131 (31%), Positives = 58/131 (43%), Gaps = 1/131 (0%)
 Frame = +2

Query: 413 PKASARLASTGTSSSSATTTTQTVFVWRSTPTHIPLASAASALAVLPPWTATAAFPAPRA 592
           P  +A  A+  T++++AT  T       +T       +A +A A  P   A AA PA  A
Sbjct: 49  PATAATAATEATAATAATPATAATPATAATAATTAATAATAATAATPARAARAATPATAA 108

Query: 593 TGAMRAPASALPAPPAPSPSPPRSPLVPSTASTPRPTIS*HTWRWALSPARSAPRGTSS- 769
           T A  A A+   A  A +   P     P+TA+TP    +  T   A + A SA   T++ 
Sbjct: 109 TPATAATAAT--AATAATAETPARAATPATAATPATAATPATAATAATAATSATAATAAR 166

Query: 770 PTLPAPCACPA 802
              PA  A PA
Sbjct: 167 AATPATAATPA 177

 Score = 51.2 bits (121), Expect(2) = 5e-09
 Identities = 41/139 (29%), Positives = 59/139 (41%), Gaps = 9/139 (6%)
 Frame = +2

Query: 413 PKASARLASTGTSSSSATTTTQTVFVWRSTPTHI-----PLASAASALAVLPPWTATAAF 577
           P  +AR A+  T++++AT  T       +TP        P   A  A    P   ATAA 
Sbjct: 368 PARAARAATPATAATAATAATAATAATAATPARAARAATPATPATPATPATPATAATAAT 427

Query: 578 PAPRATGAMRAPASALPAPPAPS----PSPPRSPLVPSTASTPRPTIS*HTWRWALSPAR 745
            A  AT A  A A+     P P+     + P +   P+TA T     +  T   A +PAR
Sbjct: 428 AATAATAATAATAATAATAPTPARAARAATPATGATPATAPTAGTAATAATAATAATPAR 487

Query: 746 SAPRGTSSPTLPAPCACPA 802
           ++   T++   P   A PA
Sbjct: 488 ASTPATAA--TPVTAATPA 504

 Score = 50.1 bits (118), Expect = 5e-05
 Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
 Frame = +2

Query: 422 SARLASTGTSSSSATTTTQTVFVWRSTPTHI--PLASAASALAVLPPWTATAAFPAPRAT 595
           +A  A+  T +++AT  T        TP     P  +A  A A  P   ATAA  A  AT
Sbjct: 101 AATPATAATPATAATAATAATAATAETPARAATPATAATPATAATPATAATAATAATSAT 160

Query: 596 GAMRAPAS-----ALPAPPAPSP-----SPPRSPLVPSTASTPRPTIS*HTWRWALSPAR 745
            A  A A+     A PA PA +      + P +    +TA+T     +  T   A +PAR
Sbjct: 161 AATAARAATPATAATPATPATAARAARAATPATAATAATAATAATAATAATAATAATPAR 220

Query: 746 SAPRGT--SSPTLPAPCACPAHSGFVSTS 826
           +A   T  ++PT PA  A PA +   +T+
Sbjct: 221 AARAATPATAPT-PATAATPATAATAATA 248

 Score = 49.3 bits (116), Expect = 8e-05
 Identities = 46/144 (31%), Positives = 63/144 (42%), Gaps = 6/144 (4%)
 Frame = +2

Query: 413 PKASARLASTGTSSSSATTTTQTVFVWRST-PTHIPLASAASALAVLPPWT----ATAAF 577
           P  +AR A+  T+ + AT  T       +T PT    A AA A       T    AT A 
Sbjct: 218 PARAARAATPATAPTPATAATPATAATAATAPTAATPARAARAATPATAATLATAATPAT 277

Query: 578 PAPRATGAMRAPASALPAPP-APSPSPPRSPLVPSTASTPRPTIS*HTWRWALSPARSAP 754
           PA  AT A  A A+    P  A +P+ P +   P+T +T     +  T   A +PAR+A 
Sbjct: 278 PATPATAATDATAATAATPARAATPATPATAATPATPATAATAATAATAATAATPARAAR 337

Query: 755 RGTSSPTLPAPCACPAHSGFVSTS 826
             T     PA  A PA +   +T+
Sbjct: 338 AAT-----PATAATPATAATAATA 356

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
 Frame = +2

Query: 413 PKASARLASTGTSSSSATTTTQTVFVWRSTP--THIPLASAASALAVLPPWTATAAFPAP 586
           P   A  A+  T++++AT  T       +TP     P  +A +A A      ATAA PA 
Sbjct: 311 PATPATAATAATAATAATAATPARAARAATPATAATPATAATAATAATAATAATAATPAR 370

Query: 587 RATGAMRAPA-----SALPAPPAPSPSPPR-----SPLVPSTASTPRPTIS*HTWRWALS 736
            A  A  A A     +A  A  A + +P R     +P  P+T +TP    +  T   A +
Sbjct: 371 AARAATPATAATAATAATAATAATAATPARAARAATPATPATPATPATPATAATAATAAT 430

Query: 737 PARSAPRGTSSPTLPAPCACPAHSGFVSTSGAT 835
            A +A   T++    AP    A       +GAT
Sbjct: 431 AATAATAATAATAATAPTPARAARAATPATGAT 463

 Score = 47.4 bits (111), Expect(2) = 2e-08
 Identities = 45/141 (31%), Positives = 65/141 (45%), Gaps = 3/141 (2%)
 Frame = +2

Query: 413 PKASARLASTGTSSSSATTTTQTVFVWRSTP-THIPLASAAS-ALAVLPPWTATAAFPAP 586
           P  +AR A+  T+++ AT  T       +T  T    A+AA+ A A  P   ATAA PA 
Sbjct: 254 PARAARAATPATAATLATAATPATPATPATAATDATAATAATPARAATPATPATAATPAT 313

Query: 587 RATGAMRAPASALPAPPAPSPSPPRSPLVPSTASTPRPTIS*HTWRWALSPARSA-PRGT 763
            AT A  A A+   A  A +P+       P+TA+TP    +  T   A + A +A P   
Sbjct: 314 PATAATAATAAT--AATAATPARAARAATPATAATPATAATAATAATAATAATAATPARA 371

Query: 764 SSPTLPAPCACPAHSGFVSTS 826
           +    PA  A  A +   +T+
Sbjct: 372 ARAATPATAATAATAATAATA 392

 Score = 47.0 bits (110), Expect = 4e-04
 Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
 Frame = +2

Query: 422 SARLASTGTSSSSATTTTQTVFVWRSTPTHIPLASAASALAVLPPWTATAAFPAPRATGA 601
           +AR A+  T+++ AT  T      R+     P  +A +A A      ATAA  A  AT A
Sbjct: 164 AARAATPATAATPATPATAA----RAARAATPATAATAATAATAATAATAATAATAATPA 219

Query: 602 MRAPASALPAPPAPSPSPPRSPLVPSTASTPRPTIS*HTWRWALSPARSAPRGT----SS 769
            RA  +A PA  AP+P+   +P   +TA+T     +      A +PA +A   T    ++
Sbjct: 220 -RAARAATPA-TAPTPATAATPATAATAATAPTAATPARAARAATPATAATLATAATPAT 277

Query: 770 PTLPAPCACPAHSGFVST 823
           P  PA  A  A +   +T
Sbjct: 278 PATPATAATDATAATAAT 295

 Score = 38.1 bits (87), Expect = 0.19
 Identities = 37/140 (26%), Positives = 56/140 (39%), Gaps = 10/140 (7%)
 Frame = +2

Query: 413 PKASARLASTGTSSSSATTTTQTVFVWRSTPTHIPLASAASALAVLPPWTATAAFPAPRA 592
           P  +A  A+T  ++++A T        R+         A +A A      ATA  PA  A
Sbjct: 73  PATAATAATTAATAATAATAATPARAARAATPATAATPATAATAATAATAATAETPARAA 132

Query: 593 TGAMRA-------PASALPAPPAPSPSPPRS---PLVPSTASTPRPTIS*HTWRWALSPA 742
           T A  A       PA+A  A  A + +   +      P+TA+TP    +      A +PA
Sbjct: 133 TPATAATPATAATPATAATAATAATSATAATAARAATPATAATPATPATAARAARAATPA 192

Query: 743 RSAPRGTSSPTLPAPCACPA 802
            +A   T++    A  A  A
Sbjct: 193 TAATAATAATAATAATAATA 212

 Score = 38.1 bits (87), Expect = 0.19
 Identities = 35/115 (30%), Positives = 44/115 (37%), Gaps = 1/115 (0%)
 Frame = +1

Query: 19  PARASSLLAPFTPARMSTLASAPSAITDAVYKTFTDVTTAVATDANYFADQQLRVVTMA- 195
           PARA+    P TPA  +T A+  +A T A   T     TA        A    R    A 
Sbjct: 398 PARAARAATPATPATPATPATPATAATAATAATAATAATAATAATAATAPTPARAARAAT 457

Query: 196 PGTGRVSCTFPTLYAAAGPFSPKFFVFEYASSTVGANALAVADTVTSLTSFTTQA 360
           P TG    T PT   AA   +        A++   A A   A   T +T+ T  A
Sbjct: 458 PATGATPATAPTAGTAATAATA-------ATAATPARASTPATAATPVTAATPAA 505

 Score = 36.6 bits (83), Expect = 0.55
 Identities = 35/122 (28%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
 Frame = +1

Query: 16  RPARASSLLAPFTPARMSTLASAPSAITDAVYKT----FTDVTTAVATDANYFADQQLRV 183
           R ARA++     TPA  +T A+A +A T A   T        T A A  A   A      
Sbjct: 334 RAARAATPATAATPATAATAATAATAATAATAATPARAARAATPATAATAATAATAATAA 393

Query: 184 VTMAPGTGRVSCTFPTLYAAAGPFSPKFFVFEYASSTVGANALAVADTVTSLTSFTTQAA 363
               P     + T  T    A P +P       A++   A A   A   T+ T+ T   A
Sbjct: 394 TAATPARAARAATPATPATPATPATP-------ATAATAATAATAATAATAATAATAATA 446

Query: 364 PT 369
           PT
Sbjct: 447 PT 448

 Score = 33.9 bits (76), Expect(2) = 1e-10
 Identities = 37/136 (27%), Positives = 48/136 (35%), Gaps = 7/136 (5%)
 Frame = +1

Query: 4   LFLLRPARASSLLAPFT---PARMSTLASAPSAITDAVYKT----FTDVTTAVATDANYF 162
           L + RPA A+    P T   PA  +T A+A +A T+A   T     T  T A A  A   
Sbjct: 23  LLVARPAAAARAATPATAATPATAATPATAATAATEATAATAATPATAATPATAATAATT 82

Query: 163 ADQQLRVVTMAPGTGRVSCTFPTLYAAAGPFSPKFFVFEYASSTVGANALAVADTVTSLT 342
           A       T A          P   A     +        A++   A A   A   T  T
Sbjct: 83  AATAATAATAATPARAARAATPATAATPATAATAATAATAATAETPARAATPATAATPAT 142

Query: 343 SFTTQAAPTFITGPTN 390
           + T   A T  T  T+
Sbjct: 143 AATPATAATAATAATS 158

 Score = 33.5 bits (75), Expect(2) = 2e-08
 Identities = 37/130 (28%), Positives = 46/130 (34%)
 Frame = +1

Query: 19  PARASSLLAPFTPARMSTLASAPSAITDAVYKTFTDVTTAVATDANYFADQQLRVVTMAP 198
           PARA++     TPA  +T A+A +A T A     T  T A A  A              P
Sbjct: 128 PARAATPATAATPATAATPATAATAATAA-----TSATAATAARA------------ATP 170

Query: 199 GTGRVSCTFPTLYAAAGPFSPKFFVFEYASSTVGANALAVADTVTSLTSFTTQAAPTFIT 378
            T     T  T   AA   +P       A++   A A   A   T+ T      A T  T
Sbjct: 171 ATAATPATPATAARAARAATPA-TAATAATAATAATAATAATAATAATPARAARAATPAT 229

Query: 379 GPTNVPQRVP 408
            PT      P
Sbjct: 230 APTPATAATP 239

 Score = 32.0 bits (71), Expect(2) = 5e-09
 Identities = 34/123 (27%), Positives = 44/123 (35%)
 Frame = +1

Query: 19  PARASSLLAPFTPARMSTLASAPSAITDAVYKTFTDVTTAVATDANYFADQQLRVVTMAP 198
           PA A +     TPA  +T A+AP+A T A  +     T A A      A           
Sbjct: 227 PATAPTPATAATPATAATAATAPTAATPA--RAARAATPATAATLATAATPATPATPATA 284

Query: 199 GTGRVSCTFPTLYAAAGPFSPKFFVFEYASSTVGANALAVADTVTSLTSFTTQAAPTFIT 378
            T   + T  T   AA P +P       A+    A A   A   T+ T+ T   A    T
Sbjct: 285 ATDATAATAATPARAATPATPA----TAATPATPATAATAATAATAATAATPARAARAAT 340

Query: 379 GPT 387
             T
Sbjct: 341 PAT 343

>gb|EAA40993.1| GLP_25_73483_71861 [Giardia lamblia ATCC 50803]
          Length = 540

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
 Frame = +1

Query: 520 GQCRKCPGGTATMDGYRCIPC-PSGYWSNEGARECTACPAGTIAKPAALTARAKYSIDPT 696
           G C  CP GTA+  G  C PC P  Y  N G+  C  C AG     +  T+    S+   
Sbjct: 350 GVCEPCPAGTASKAGSVCTPCTPGTYQPNSGSGTCINCSAGQYQDSSGKTSCLACSVG-- 407

Query: 697 TYHFVTHLAMGPESCKKCPTGYFQPNIAGTVCLPCP 804
           +Y  +     G E+C  CP G +QP+     C+ CP
Sbjct: 408 SYQGL----QGAETCILCPHGQYQPSQGQVACIRCP 439

 Score = 40.8 bits (94), Expect = 0.029
 Identities = 31/119 (26%), Positives = 42/119 (35%)
 Frame = +1

Query: 454 IFSNDNYTNGVRVAVDAYPYPVGQCRKCPGGTATMDGYRCIPCPSGYWSNEGARECTACP 633
           I + D   + V   VD+   P  +   C  G    D   C PCP+G  S  G+  CT C 
Sbjct: 313 ILARDGIHSWVPEEVDSPVDPPVEPSDCKAGEQLTDDGVCEPCPAGTASKAGS-VCTPCT 371

Query: 634 AGTIAKPAALTARAKYSIDPTTYHFVTHLAMGPESCKKCPTGYFQPNIAGTVCLPCPLG 810
            GT    +                       G  +C  C  G +Q +   T CL C +G
Sbjct: 372 PGTYQPNS-----------------------GSGTCINCSAGQYQDSSGKTSCLACSVG 407

>ref|NP_821286.1| hypothetical protein [Streptomyces avermitilis MA-4680]
            gi|29603748|dbj|BAC67821.1| hypothetical protein
            [Streptomyces avermitilis MA-4680]
          Length = 844

 Score = 59.3 bits (142), Expect = 8e-08
 Identities = 47/139 (33%), Positives = 64/139 (45%), Gaps = 1/139 (0%)
 Frame = +2

Query: 413  PKASARLASTGTSSSSATTTTQTVFVWRSTPTHIP-LASAASALAVLPPWTATAAFPAPR 589
            P+A++  ++   SS  ATTT+       STP+  P   S  SA    PP + TA  P   
Sbjct: 640  PEAASSPSTPTDSSKPATTTSTKASTKCSTPSPAPPTTSTPSATESSPPCSPTA--PTTT 697

Query: 590  ATGAMRAPASALPAPPAPSPSPPRSPLVPSTASTPRPTIS*HTWRWALSPARSAPRGTSS 769
            +  +  APA + P    PS SPP  P  P  A+TP P     T     SP  S+    SS
Sbjct: 698  SPSSSPAPAPSTPTKSPPSTSPPTPPSSPKHANTPPPNSPPGTSPTPPSPPNSS-SANSS 756

Query: 770  PTLPAPCACPAHSGFVSTS 826
            PT  A    P++S   +T+
Sbjct: 757  PTPSATATHPSNSASSTTT 775

 Score = 35.4 bits (80), Expect = 1.2
 Identities = 52/214 (24%), Positives = 76/214 (35%), Gaps = 9/214 (4%)
 Frame = +2

Query: 89   QPSPTQFTRLLRT*RLPLQRTPTISRISSCASSPWRLALGGCRAHFRLCMPPLGLSHPNF 268
            +P+ T  T+       P    PT S  S+  SSP                 P   + P  
Sbjct: 654  KPATTTSTKASTKCSTPSPAPPTTSTPSATESSP-----------------PCSPTAPTT 696

Query: 269  LS-SSMPAQRLERMRWPSPTR*LR*PPSRLKRRPRSLLVLPTCLKGFHYPKASARLASTG 445
             S SS PA        P+P+   + PPS     P S             P  S    S  
Sbjct: 697  TSPSSSPA--------PAPSTPTKSPPSTSPPTPPSSPKHANTPPPNSPPGTSPTPPSPP 748

Query: 446  TSSSSATTTTQTVFVWRSTPTHIPLASAASALAVLPPWTATAAFPAPRATG--------A 601
             SSS+ ++ T +     +T TH   +++++     PP + T A P P            A
Sbjct: 749  NSSSANSSPTPS-----ATATHPSNSASSTTTTPSPPKSPTPATPPPTCAAPAPTTKEDA 803

Query: 602  MRAPASALPAPPAPSPSPPRSPLVPSTASTPRPT 703
              + ++  P   AP+  PP  P  P+  S P  T
Sbjct: 804  ASSSSANSPNAGAPATPPPAKPSGPNKPSPPTNT 837

>ref|NP_650778.1| CG6026-PA [Drosophila melanogaster] gi|10726612|gb|AAF55629.2|
           CG6026-PA [Drosophila melanogaster]
          Length = 1542

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 11/183 (6%)
 Frame = +2

Query: 254 SHPNFLSSSMPAQRLERMRWPSPTR*LR*PPSRLKRRPRSLLVLPTCLKGFHYPKASARL 433
           S+ N++++  P   +  +  P P        S     P + L   T   G +YP + +  
Sbjct: 133 SNKNYITNKKPTSVVAPVTPPPPNY----HSSNFFTVPTTKLTAVTPTAGAYYPSSPSTS 188

Query: 434 ASTGTSSSSATTTTQTVFVWRST--PTHIPLASAASALAVLP--PWTATAAFPAPRATGA 601
            ST TS+S+ TTTT T    R T  P+  P+ +  +     P   +T T+  P P  T  
Sbjct: 189 TSTTTSTSTTTTTTTTT---RGTLPPSRKPVTTTTTTAPTSPAAKYTTTSRRPIPLQT-- 243

Query: 602 MRAPASALPAPPAPS-------PSPPRSPLVPSTASTPRPTIS*HTWRWALSPARSAPRG 760
                S  P PP  S       P+   SP VPST+   RPT+     R    P +S+PR 
Sbjct: 244 ----VSTTPQPPRTSTTRKKFVPTKKYSPTVPSTSG--RPTVGHEDQR----PVKSSPRP 293

Query: 761 TSS 769
           T S
Sbjct: 294 TPS 296



EST assemble image


clone accession position
1 MXL089e01_r BP098214 1 366
2 HCL085g02_r AV644295 44 431
3 MXL026f05_r BP094660 188 417
4 MXL086f06_r BP098079 269 644
5 CL31f04_r AV394997 288 782
6 CL18a02_r AV394039 371 864




Chlamydomonas reinhardtii
Kazusa DNA Research Institute